Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is 37521768

Identifier: 37521768

GI number: 37521768

Start: 2350875

End: 2352317

Strand: Reverse

Name: 37521768

Synonym: gll2199

Alternate gene names: NA

Gene position: 2352317-2350875 (Counterclockwise)

Preceding gene: 37521769

Following gene: 37521767

Centisome position: 50.49

GC content: 65.28

Gene sequence:

>1443_bases
ATGCAAGGAGCCCTGCTCAACCGCTCGGGCGGCTGGATCGCCCTGGTGGCCTTTATCGCCGGGTGCGCTCTGGTCGGGGC
CGCCCTGGTCAAATCGCCCCTGCTGGTGGGGGCCGCCGCCGTGGTCGCCGTGGGCGTGATCTGCCTCATCCTCAAATTCG
AGGTGACGGTGATTATCCTGCTGGTGCTGCGCTCGAGCCTCGACCCATTCAGCAGCTTCGGGCTGACCGGGGCGCTGGCG
CTACTGATCGACGCGGTGACGGTGATTTATCTGATCACCCGCCTGCTTGCGCGCAAACCGATCCAGGGCGACTGGCTGTG
GGGGGTGTTGGCGCTGTTTATCGCCTTGATGGGCTTTTGGCCCCTCGCCATGGCCCAGGGTTGGCTCGGCCACCGCGCCG
ACGCGGCGATGCTGGGTTACCCGACGTTGGGCGAGGACAGTCTGCGCGAGTGGATCCGCATCCTCTCCTATGCGATGATC
TACGGCCTGGCGATGCAGCTCAAAGGCCGCATCACCCCCGAGCGGCTACTGAGCCTGATCATGCTCTCCCTCGTCGTGCC
GCTCACAGTCGCCTTTTTACAGATGTTCGCCAACGGCGCCTTGCCGCCGCTGATGCAGACGCGCATGGAGGGCCGCGTCT
TCGGCACCGTCAGCCACCCCGACACCTTCGTGCTCTATTTGCTTTTGATGATGGGGCTCTCGTGGTGGCGCTTCAAGCTC
ACCGGCCACTGGCGCTGGCTGGTGCTGATGGCGGTGCTGGTCATCCCTTACACGGGTACCAAGACCCTCGGGGGCCTGGG
CATGGCGGCGGTCTTTCTGGCGGTGCTGCTGCTGCCGCGCCTGAATGCCAAGACGATCATCGGCGGAGCGGTCGCCGTGG
CGCTGGTCTTGGGAACGTTTACGGCTTCCCCGGCGGGGCAGGAGCGCCTCGAATCGCTGCGCCAAACACCGATATTCAAC
GGCCAGTTCGATGTCAACAGCGCCGTGCATCTGGCGAGCGTCCAGAACAACTCGTTTGTCTGGCGTCTGGCGCAGTGGAC
CTATCTGCTCCATGCCTGGGAGCGCGCCCCTCTGCTGGGCCACGGCCTGAACACCTCGACTGCGCTCTCGCCGTTTCACA
ACGGCGCCCACAACGACTACGTGCGCGCCCTGGCCGAGACGGGCGCCGTCGGGCTGGTGCTCTACCTGGGGTTGTGGGCG
GCGGTGCTGACGCGGCTGGTTGGGTTATGGCGGGCTTCGCCGCGCAATTCTTGCGCCCGGGAGCTTCGCCTGGTGCTCAT
CGCCGTCTGCGCGGCGCTGCTGTTTGGCAGCCTCACCAACCACTTGTGGGAAACGACGACCTTTTATTTCTACTGGTGGA
CGGCCGTGGCGGTCGCCGGCTGGACTTTTTCGGAGAAAACCCGACATGACCCGCATCCACGCCCTCTGTCTGGCGCGCAA
TGA

Upstream 100 bases:

>100_bases
GGTCTGGTCGGCGGCAGCCTTTCGCCTGAGCGTCGCCGATACGGTCGTGCGCTCGGTGCGCGCCGACGATTGCTGCATCG
CCATTAGTTAGGAATATCCC

Downstream 100 bases:

>100_bases
AGGCGATGTGATCGCCCAGACCCTGCTCCACGCGAGCCGCTTCTGTCACCGCATCTACGTGTGGGATAACGGCAGCGAAG
ACGACACCTGGGAGCAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MQGALLNRSGGWIALVAFIAGCALVGAALVKSPLLVGAAAVVAVGVICLILKFEVTVIILLVLRSSLDPFSSFGLTGALA
LLIDAVTVIYLITRLLARKPIQGDWLWGVLALFIALMGFWPLAMAQGWLGHRADAAMLGYPTLGEDSLREWIRILSYAMI
YGLAMQLKGRITPERLLSLIMLSLVVPLTVAFLQMFANGALPPLMQTRMEGRVFGTVSHPDTFVLYLLLMMGLSWWRFKL
TGHWRWLVLMAVLVIPYTGTKTLGGLGMAAVFLAVLLLPRLNAKTIIGGAVAVALVLGTFTASPAGQERLESLRQTPIFN
GQFDVNSAVHLASVQNNSFVWRLAQWTYLLHAWERAPLLGHGLNTSTALSPFHNGAHNDYVRALAETGAVGLVLYLGLWA
AVLTRLVGLWRASPRNSCARELRLVLIAVCAALLFGSLTNHLWETTTFYFYWWTAVAVAGWTFSEKTRHDPHPRPLSGAQ

Sequences:

>Translated_480_residues
MQGALLNRSGGWIALVAFIAGCALVGAALVKSPLLVGAAAVVAVGVICLILKFEVTVIILLVLRSSLDPFSSFGLTGALA
LLIDAVTVIYLITRLLARKPIQGDWLWGVLALFIALMGFWPLAMAQGWLGHRADAAMLGYPTLGEDSLREWIRILSYAMI
YGLAMQLKGRITPERLLSLIMLSLVVPLTVAFLQMFANGALPPLMQTRMEGRVFGTVSHPDTFVLYLLLMMGLSWWRFKL
TGHWRWLVLMAVLVIPYTGTKTLGGLGMAAVFLAVLLLPRLNAKTIIGGAVAVALVLGTFTASPAGQERLESLRQTPIFN
GQFDVNSAVHLASVQNNSFVWRLAQWTYLLHAWERAPLLGHGLNTSTALSPFHNGAHNDYVRALAETGAVGLVLYLGLWA
AVLTRLVGLWRASPRNSCARELRLVLIAVCAALLFGSLTNHLWETTTFYFYWWTAVAVAGWTFSEKTRHDPHPRPLSGAQ
>Mature_480_residues
MQGALLNRSGGWIALVAFIAGCALVGAALVKSPLLVGAAAVVAVGVICLILKFEVTVIILLVLRSSLDPFSSFGLTGALA
LLIDAVTVIYLITRLLARKPIQGDWLWGVLALFIALMGFWPLAMAQGWLGHRADAAMLGYPTLGEDSLREWIRILSYAMI
YGLAMQLKGRITPERLLSLIMLSLVVPLTVAFLQMFANGALPPLMQTRMEGRVFGTVSHPDTFVLYLLLMMGLSWWRFKL
TGHWRWLVLMAVLVIPYTGTKTLGGLGMAAVFLAVLLLPRLNAKTIIGGAVAVALVLGTFTASPAGQERLESLRQTPIFN
GQFDVNSAVHLASVQNNSFVWRLAQWTYLLHAWERAPLLGHGLNTSTALSPFHNGAHNDYVRALAETGAVGLVLYLGLWA
AVLTRLVGLWRASPRNSCARELRLVLIAVCAALLFGSLTNHLWETTTFYFYWWTAVAVAGWTFSEKTRHDPHPRPLSGAQ

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52422; Mature: 52422

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGALLNRSGGWIALVAFIAGCALVGAALVKSPLLVGAAAVVAVGVICLILKFEVTVIIL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLRSSLDPFSSFGLTGALALLIDAVTVIYLITRLLARKPIQGDWLWGVLALFIALMGFW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
PLAMAQGWLGHRADAAMLGYPTLGEDSLREWIRILSYAMIYGLAMQLKGRITPERLLSLI
HHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLSLVVPLTVAFLQMFANGALPPLMQTRMEGRVFGTVSHPDTFVLYLLLMMGLSWWRFKL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCEEEEEE
TGHWRWLVLMAVLVIPYTGTKTLGGLGMAAVFLAVLLLPRLNAKTIIGGAVAVALVLGTF
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TASPAGQERLESLRQTPIFNGQFDVNSAVHLASVQNNSFVWRLAQWTYLLHAWERAPLLG
CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC
HGLNTSTALSPFHNGAHNDYVRALAETGAVGLVLYLGLWAAVLTRLVGLWRASPRNSCAR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ELRLVLIAVCAALLFGSLTNHLWETTTFYFYWWTAVAVAGWTFSEKTRHDPHPRPLSGAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGALLNRSGGWIALVAFIAGCALVGAALVKSPLLVGAAAVVAVGVICLILKFEVTVIIL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLRSSLDPFSSFGLTGALALLIDAVTVIYLITRLLARKPIQGDWLWGVLALFIALMGFW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
PLAMAQGWLGHRADAAMLGYPTLGEDSLREWIRILSYAMIYGLAMQLKGRITPERLLSLI
HHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLSLVVPLTVAFLQMFANGALPPLMQTRMEGRVFGTVSHPDTFVLYLLLMMGLSWWRFKL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCEEEEEE
TGHWRWLVLMAVLVIPYTGTKTLGGLGMAAVFLAVLLLPRLNAKTIIGGAVAVALVLGTF
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TASPAGQERLESLRQTPIFNGQFDVNSAVHLASVQNNSFVWRLAQWTYLLHAWERAPLLG
CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC
HGLNTSTALSPFHNGAHNDYVRALAETGAVGLVLYLGLWAAVLTRLVGLWRASPRNSCAR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ELRLVLIAVCAALLFGSLTNHLWETTTFYFYWWTAVAVAGWTFSEKTRHDPHPRPLSGAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA