| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is fdnG [H]
Identifier: 37521745
GI number: 37521745
Start: 2325022
End: 2327229
Strand: Reverse
Name: fdnG [H]
Synonym: gll2176
Alternate gene names: 37521745
Gene position: 2327229-2325022 (Counterclockwise)
Preceding gene: 37521746
Following gene: 37521744
Centisome position: 49.95
GC content: 70.06
Gene sequence:
>2208_bases ATGCGCAGACGTGACATTCTTCGGCTCGCGGGTCTCGGATTGGGGGCCGCCGGGGGAGCGGGAGTTCCCGCCCTGGCCCA GAACCCGGCGAAGGTTGGCGCGCGCGCGGCGGCCGGACGGTTGCTCGTTCCCCAGTACCGGGCGGCGGGGGCGGCAAGCT TTTCTGCGATCACCTGGAACAAAGCCTGGGCCACGGTCGCCGAGCGCCTGCTCGAGGTGCGCGCCTCGAGCTGGTCGGAG GCGAACCGGCGCGCCGAGCGGCTGGGTGTCTACTGCGGCACGGGGCTGACCAACGAAGAGGCTTATGCCTGGGCCAAACT GGCCCGGTTGAGCGGAGCGCGCCTGGAGCGCAGCGGCGAGGGAGCGAGCCTGGCCCTTGCCCGCGCCCTGGAGGCCACCT TCGGCGTGCCCGCCGCCCCCAACCACTGGCTGGAACTGAGCAAAAGTCAGGCAATCTTGGTGGTTGGCCGGGCGGGCGGT GCGGGACATCCCGCCTTTGCAGCGGCGCAGGCGGCGGCGCAGGCGGGTGTGCCGGTCTGGAGTCTGGGGGAGGGCCAGGA CGCCTCTATCGGCAACGCCCTGGCGGTTGCTCCCCGCGGCGAGGTGGCGGTCCTGGGCGGGCTGATCCGGTTTATCGTCG AGAACAAGCGCGCCGATGCCGCCTTTCTCGATGTCCACACCAACGCCGCTTTTCGTCTGCTGCCGGAATTTGGCTTCCAA AACGGCGTTTTCTCGGGCTTCGACCCGAAGACGCGCCGCTACGACCCCGAATCCTGGGGCTACGAATTTCTCGAGAACGG CCGGCCCGCCCGTTCTGAACAGATTGCCGAGGAAGGCACCGTCTACGCGCAGATAGCCCGGTTCTTTGCGCCCTACACCC TGGAGCGGGCGGCCCGCACGGCAGGGGTAGGCGAAGCAGCACTGGGGCGCTTTTATCGCGAATTCACCGCTCCCGAGCGC CGGTCGGCGGCGATCGTCTGTGCTATTGACGCCGCGGCTGAGCCGGCGGCGATCGAGCAGCGGGTGCGCCTGGCGGCGAT CGCCAGTTTGCTGCTCGGGCAGGTGGGCCGACCCGGAGGCGGTATCGTCGTGGCTTCCCCAGGTTTCAACCCCCAGGGCA CTGCCGATGTCGGGGCCACCGGCGCCATGCTGCCGGGGTACGCCGGGGCGCCGCCTTTGGCGGGAGAAGATTTTATCGGC TGGGTACAGCGCCACGGGGTGCGCAACCAGCGCCGGTTGGTGGCCATGCTGCGCAGCTGGTACGACACGGCGGCCCCCGA TTTTGGCTTTGCGGCCCTGCCGTGCTCCCGTCCCGGCGAGCCGACTCTGCGCGGCGGCAACCTGGAGATGTTGGTGTGCG TGGGTGCCGACCCGTTAGCGGAGGGCAACTGGCCCCTCGAAAAACTCAAAACCCTGGTGGTGCTCGACCACGCCGGTACC AACCGCACCGCCCGCTTCTGGCAGGGACGGGGCGCGGCGCGCACCGAGGTGCTGTTTTTGCCCCTGGCCCACCCCGACGA GCGGGAGGGCACCACCACCGATTCCGGCCGCCGCATCGTGCTGCTTTCACCCGCCTCTGGACCCAGAGGCCAGAGTCAGA CGGGCCTGACGACGGCGGCAAGCCTGTGGGAGCAAATCGGCTTCAAACTGGCTTCGCGCACCCAGCCGCGCGAGGAGTCC CTGCGCGAGGCGCGCTGGTGGCGCGAGACGACCCCGGCGGCAGTCTGGGCCGAGATGGTCGGTGCCGATTTGGGCAATCC GGCCGAGGTTGACGGGGCCGCCAATCCGCGCGAATTGCGCTGCGGGGTGGCCATCTACGCCGGGGCGAGCGGCGAAAAGC TCGCCGGGCGGCGGGAGCGCGGCGAAGACGGCTCCGGACTCGGGCTTTATCCGGCCTACGGCTATCCGTGGCCCGGCGAT GTGCGCGTGATCGCCAATCGTGCCAGCGCCGATCTGCAGGGCAACCCCCGCCTCGCGCCGCCCTTTATGCGCTGGGACGG CAAAGCCTGGAGCGGACCGGATACCCCCGATATCGCCAACCCGGCCAACCCCGACGACCCGGCCGCCACGCGCTCGTTTC GGGGAACCCCCGAGGGGGTGGCCCGGCTGTTTGCCGCCTACTACGCCGCCGGGCTCAACCTCGATACCGGCATCGCCTTT TTGCCCGCGGCCCTGCCCGCGGGCGGCCCCCTGCCCTTTGCTAAATAA
Upstream 100 bases:
>100_bases CCGATTCTGTCCCTACTGCGGCACCGGCTACAAAGCGCCGGTCTAAACAGCGCCTCGCCGCGAAGTGGTGTAAGGTTGAT GGAGTTTTTTTGACTCCTAT
Downstream 100 bases:
>100_bases TCCCAACGCCCGCCCAGGTTCTGGGCGCTCTGCGCTAGCTTGGGAGCATGAGCGCCGTGTCGACTTTCTGGCTGGTTCTG GGCATTGCGCTGTGGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Anaerobic formate dehydrogenase major subunit; Formate dehydrogenase-N subunit alpha; FDH-N subunit alpha [H]
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MRRRDILRLAGLGLGAAGGAGVPALAQNPAKVGARAAAGRLLVPQYRAAGAASFSAITWNKAWATVAERLLEVRASSWSE ANRRAERLGVYCGTGLTNEEAYAWAKLARLSGARLERSGEGASLALARALEATFGVPAAPNHWLELSKSQAILVVGRAGG AGHPAFAAAQAAAQAGVPVWSLGEGQDASIGNALAVAPRGEVAVLGGLIRFIVENKRADAAFLDVHTNAAFRLLPEFGFQ NGVFSGFDPKTRRYDPESWGYEFLENGRPARSEQIAEEGTVYAQIARFFAPYTLERAARTAGVGEAALGRFYREFTAPER RSAAIVCAIDAAAEPAAIEQRVRLAAIASLLLGQVGRPGGGIVVASPGFNPQGTADVGATGAMLPGYAGAPPLAGEDFIG WVQRHGVRNQRRLVAMLRSWYDTAAPDFGFAALPCSRPGEPTLRGGNLEMLVCVGADPLAEGNWPLEKLKTLVVLDHAGT NRTARFWQGRGAARTEVLFLPLAHPDEREGTTTDSGRRIVLLSPASGPRGQSQTGLTTAASLWEQIGFKLASRTQPREES LREARWWRETTPAAVWAEMVGADLGNPAEVDGAANPRELRCGVAIYAGASGEKLAGRRERGEDGSGLGLYPAYGYPWPGD VRVIANRASADLQGNPRLAPPFMRWDGKAWSGPDTPDIANPANPDDPAATRSFRGTPEGVARLFAAYYAAGLNLDTGIAF LPAALPAGGPLPFAK
Sequences:
>Translated_735_residues MRRRDILRLAGLGLGAAGGAGVPALAQNPAKVGARAAAGRLLVPQYRAAGAASFSAITWNKAWATVAERLLEVRASSWSE ANRRAERLGVYCGTGLTNEEAYAWAKLARLSGARLERSGEGASLALARALEATFGVPAAPNHWLELSKSQAILVVGRAGG AGHPAFAAAQAAAQAGVPVWSLGEGQDASIGNALAVAPRGEVAVLGGLIRFIVENKRADAAFLDVHTNAAFRLLPEFGFQ NGVFSGFDPKTRRYDPESWGYEFLENGRPARSEQIAEEGTVYAQIARFFAPYTLERAARTAGVGEAALGRFYREFTAPER RSAAIVCAIDAAAEPAAIEQRVRLAAIASLLLGQVGRPGGGIVVASPGFNPQGTADVGATGAMLPGYAGAPPLAGEDFIG WVQRHGVRNQRRLVAMLRSWYDTAAPDFGFAALPCSRPGEPTLRGGNLEMLVCVGADPLAEGNWPLEKLKTLVVLDHAGT NRTARFWQGRGAARTEVLFLPLAHPDEREGTTTDSGRRIVLLSPASGPRGQSQTGLTTAASLWEQIGFKLASRTQPREES LREARWWRETTPAAVWAEMVGADLGNPAEVDGAANPRELRCGVAIYAGASGEKLAGRRERGEDGSGLGLYPAYGYPWPGD VRVIANRASADLQGNPRLAPPFMRWDGKAWSGPDTPDIANPANPDDPAATRSFRGTPEGVARLFAAYYAAGLNLDTGIAF LPAALPAGGPLPFAK >Mature_735_residues MRRRDILRLAGLGLGAAGGAGVPALAQNPAKVGARAAAGRLLVPQYRAAGAASFSAITWNKAWATVAERLLEVRASSWSE ANRRAERLGVYCGTGLTNEEAYAWAKLARLSGARLERSGEGASLALARALEATFGVPAAPNHWLELSKSQAILVVGRAGG AGHPAFAAAQAAAQAGVPVWSLGEGQDASIGNALAVAPRGEVAVLGGLIRFIVENKRADAAFLDVHTNAAFRLLPEFGFQ NGVFSGFDPKTRRYDPESWGYEFLENGRPARSEQIAEEGTVYAQIARFFAPYTLERAARTAGVGEAALGRFYREFTAPER RSAAIVCAIDAAAEPAAIEQRVRLAAIASLLLGQVGRPGGGIVVASPGFNPQGTADVGATGAMLPGYAGAPPLAGEDFIG WVQRHGVRNQRRLVAMLRSWYDTAAPDFGFAALPCSRPGEPTLRGGNLEMLVCVGADPLAEGNWPLEKLKTLVVLDHAGT NRTARFWQGRGAARTEVLFLPLAHPDEREGTTTDSGRRIVLLSPASGPRGQSQTGLTTAASLWEQIGFKLASRTQPREES LREARWWRETTPAAVWAEMVGADLGNPAEVDGAANPRELRCGVAIYAGASGEKLAGRRERGEDGSGLGLYPAYGYPWPGD VRVIANRASADLQGNPRLAPPFMRWDGKAWSGPDTPDIANPANPDDPAATRSFRGTPEGVARLFAAYYAAGLNLDTGIAF LPAALPAGGPLPFAK
Specific function: Formate dehydrogenase allows E.coli to use formate as major electron donor during anaerobic respiration, when nitrate is used as electron acceptor. The alpha subunit forms the active site [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868719, Length=752, Percent_Identity=26.3297872340426, Blast_Score=219, Evalue=7e-58, Organism=Escherichia coli, GI3868720, Length=746, Percent_Identity=26.5415549597855, Blast_Score=211, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006443 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.2.1.2 [H]
Molecular weight: Translated: 77544; Mature: 77544
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRDILRLAGLGLGAAGGAGVPALAQNPAKVGARAAAGRLLVPQYRAAGAASFSAITWN CCHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEECCCHHCCCCCCEEEEECC KAWATVAERLLEVRASSWSEANRRAERLGVYCGTGLTNEEAYAWAKLARLSGARLERSGE HHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCC GASLALARALEATFGVPAAPNHWLELSKSQAILVVGRAGGAGHPAFAAAQAAAQAGVPVW CHHHHHHHHHHHHCCCCCCCCHHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEE SLGEGQDASIGNALAVAPRGEVAVLGGLIRFIVENKRADAAFLDVHTNAAFRLLPEFGFQ ECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHEEEHHHCCC NGVFSGFDPKTRRYDPESWGYEFLENGRPARSEQIAEEGTVYAQIARFFAPYTLERAART CCCCCCCCCCCCCCCCHHCCHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH AGVGEAALGRFYREFTAPERRSAAIVCAIDAAAEPAAIEQRVRLAAIASLLLGQVGRPGG CCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GIVVASPGFNPQGTADVGATGAMLPGYAGAPPLAGEDFIGWVQRHGVRNQRRLVAMLRSW CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH YDTAAPDFGFAALPCSRPGEPTLRGGNLEMLVCVGADPLAEGNWPLEKLKTLVVLDHAGT HHHCCCCCCEEECCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCHHHCCEEEEEECCCC NRTARFWQGRGAARTEVLFLPLAHPDEREGTTTDSGRRIVLLSPASGPRGQSQTGLTTAA CCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH SLWEQIGFKLASRTQPREESLREARWWRETTPAAVWAEMVGADLGNPAEVDGAANPRELR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEE CGVAIYAGASGEKLAGRRERGEDGSGLGLYPAYGYPWPGDVRVIANRASADLQGNPRLAP EEEEEEECCCCCHHCCCHHCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC PFMRWDGKAWSGPDTPDIANPANPDDPAATRSFRGTPEGVARLFAAYYAAGLNLDTGIAF CHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHH LPAALPAGGPLPFAK HHHHCCCCCCCCCCC >Mature Secondary Structure MRRRDILRLAGLGLGAAGGAGVPALAQNPAKVGARAAAGRLLVPQYRAAGAASFSAITWN CCHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEECCCHHCCCCCCEEEEECC KAWATVAERLLEVRASSWSEANRRAERLGVYCGTGLTNEEAYAWAKLARLSGARLERSGE HHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCC GASLALARALEATFGVPAAPNHWLELSKSQAILVVGRAGGAGHPAFAAAQAAAQAGVPVW CHHHHHHHHHHHHCCCCCCCCHHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEE SLGEGQDASIGNALAVAPRGEVAVLGGLIRFIVENKRADAAFLDVHTNAAFRLLPEFGFQ ECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHEEEHHHCCC NGVFSGFDPKTRRYDPESWGYEFLENGRPARSEQIAEEGTVYAQIARFFAPYTLERAART CCCCCCCCCCCCCCCCHHCCHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH AGVGEAALGRFYREFTAPERRSAAIVCAIDAAAEPAAIEQRVRLAAIASLLLGQVGRPGG CCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GIVVASPGFNPQGTADVGATGAMLPGYAGAPPLAGEDFIGWVQRHGVRNQRRLVAMLRSW CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH YDTAAPDFGFAALPCSRPGEPTLRGGNLEMLVCVGADPLAEGNWPLEKLKTLVVLDHAGT HHHCCCCCCEEECCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCHHHCCEEEEEECCCC NRTARFWQGRGAARTEVLFLPLAHPDEREGTTTDSGRRIVLLSPASGPRGQSQTGLTTAA CCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH SLWEQIGFKLASRTQPREESLREARWWRETTPAAVWAEMVGADLGNPAEVDGAANPRELR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEE CGVAIYAGASGEKLAGRRERGEDGSGLGLYPAYGYPWPGDVRVIANRASADLQGNPRLAP EEEEEEECCCCCHHCCCHHCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC PFMRWDGKAWSGPDTPDIANPANPDDPAATRSFRGTPEGVARLFAAYYAAGLNLDTGIAF CHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHH LPAALPAGGPLPFAK HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1834669; 9097039; 9278503; 11884747 [H]