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The map label for this gene is rbcS [H]

Identifier: 37521727

GI number: 37521727

Start: 2308900

End: 2309220

Strand: Direct

Name: rbcS [H]

Synonym: gvip297

Alternate gene names: 37521727

Gene position: 2308900-2309220 (Clockwise)

Preceding gene: 37521726

Following gene: 37521728

Centisome position: 49.56

GC content: 56.39

Gene sequence:

>321_bases
ATGCAAACGCTGCCCAAGAAGAAGTTCTACGAGACGATGTCCTATCTGCCGCCGCTCACCGACGCGGAGATAGCCAAGCA
AATCCAGTACATGCTCGACAAAGGCTATATCCCCTGCGTCGAATTCAACGAGACCAGCGAGCCCACGATGGTCTACTGGA
CGATGTGGAAACTGCCGCTGTTTTCGGTACGCTCTCCCCAGGAAGTGCTCAGCGAAGTGAACGCCTGCCGCTCGTCCTAC
CCCGGCTGCTTTATCCGGGTGATCGGCTTCGACAATATCCGCCAGTGCCAGACGATGAGCTTCATCGTCTACAAGCCCTA
G

Upstream 100 bases:

>100_bases
CACCGCCGCCAGTACATCGAGCGCACCTTGCAGCTGGAGTCTCCCGCCGAATCCGAGGCGGAAACACCCAACGATTGACC
CATTTACGGAGTCCCATCCC

Downstream 100 bases:

>100_bases
GTCCGAGCCCGATGCCTGCGCCCGCCGCCACCCACACCGGTCGCGGCGGGCTGCTATTTTGTCCGCTACCGTGTATTGGT
AATGAGTGAATTTTCCAAGT

Product: ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit

Products: NA

Alternate protein names: RuBisCO small subunit [H]

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MQTLPKKKFYETMSYLPPLTDAEIAKQIQYMLDKGYIPCVEFNETSEPTMVYWTMWKLPLFSVRSPQEVLSEVNACRSSY
PGCFIRVIGFDNIRQCQTMSFIVYKP

Sequences:

>Translated_106_residues
MQTLPKKKFYETMSYLPPLTDAEIAKQIQYMLDKGYIPCVEFNETSEPTMVYWTMWKLPLFSVRSPQEVLSEVNACRSSY
PGCFIRVIGFDNIRQCQTMSFIVYKP
>Mature_106_residues
MQTLPKKKFYETMSYLPPLTDAEIAKQIQYMLDKGYIPCVEFNETSEPTMVYWTMWKLPLFSVRSPQEVLSEVNACRSSY
PGCFIRVIGFDNIRQCQTMSFIVYKP

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO small chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000894 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 12439; Mature: 12439

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLPKKKFYETMSYLPPLTDAEIAKQIQYMLDKGYIPCVEFNETSEPTMVYWTMWKLPL
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCC
FSVRSPQEVLSEVNACRSSYPGCFIRVIGFDNIRQCQTMSFIVYKP
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCEEEEEECC
>Mature Secondary Structure
MQTLPKKKFYETMSYLPPLTDAEIAKQIQYMLDKGYIPCVEFNETSEPTMVYWTMWKLPL
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCC
FSVRSPQEVLSEVNACRSSYPGCFIRVIGFDNIRQCQTMSFIVYKP
CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6091125; 11759840 [H]