Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37521699

Identifier: 37521699

GI number: 37521699

Start: 2282617

End: 2283189

Strand: Direct

Name: 37521699

Synonym: glr2130

Alternate gene names: NA

Gene position: 2282617-2283189 (Clockwise)

Preceding gene: 37521693

Following gene: 37521700

Centisome position: 48.99

GC content: 54.28

Gene sequence:

>573_bases
GTGGGCAAACCCCCCATCAATCAAATGTTGCCTCCATTCTACCAGCAGTTCCTTCAGCAACAACTTGGACTGGACAAAGC
TGTATTCTTGCACATCCTCCTCCATACCTTGCAGACCCAACAAAACCTTTGCCTCGAACGGCTTGCCAACGCTTTGCCCC
TACCAATTACGGTCGATAGCAGGCGCAAGGCAGTCCAACGCTTCCTGCTGCTGCCATCGCTTTGTTTGTGGCATCTCTGG
TTGCCTTTGCTCGCTCAGATCATCGAACACTTTGCTGTCCAACCCCAGCGGCTGGTCCTGGCTATCGACCGCACTAACTG
GTGGAAGTACAACCTGCTAATGGTCAGCCTCGTCTGGGACCGCCGCGCTCTGCCTGTCTTCTGGCGACTGTTGAACCATG
CAGGTAATTCCAGCCTGCCAGAGCGCCGAAGTGTGCTGCTGCCTGTCCTCAAATACTTTCACCACAAGCAGATTATCGTT
TTGGGGGACCGTGAGTTTGGTTCGGTGGGCTTTGCCAATTGGCTCCAATCCCAGAAAGTCTCTTACTGCCTGCCTGCGTC
TCAAGCGCAGTGA

Upstream 100 bases:

>100_bases
AAACGCATTATCATAGGACTTGACGGGGTAACAGAGGGCTTGAAAAGCTTGCCCTGCATGGCTTCGATGCCTCTATCCTA
AGAAAGAAGGGCTTGCCACT

Downstream 100 bases:

>100_bases
ATGGTTGCAGTCGTCCGCACCATCGGACTGGCAATGTTTAGCAGACTTGGTGCTGAAGCCCGGCCAGTCTCTGTGGTTCA
AAGGAGCAAAACTGGTCAAG

Product: putative transposase

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGKPPINQMLPPFYQQFLQQQLGLDKAVFLHILLHTLQTQQNLCLERLANALPLPITVDSRRKAVQRFLLLPSLCLWHLW
LPLLAQIIEHFAVQPQRLVLAIDRTNWWKYNLLMVSLVWDRRALPVFWRLLNHAGNSSLPERRSVLLPVLKYFHHKQIIV
LGDREFGSVGFANWLQSQKVSYCLPASQAQ

Sequences:

>Translated_190_residues
MGKPPINQMLPPFYQQFLQQQLGLDKAVFLHILLHTLQTQQNLCLERLANALPLPITVDSRRKAVQRFLLLPSLCLWHLW
LPLLAQIIEHFAVQPQRLVLAIDRTNWWKYNLLMVSLVWDRRALPVFWRLLNHAGNSSLPERRSVLLPVLKYFHHKQIIV
LGDREFGSVGFANWLQSQKVSYCLPASQAQ
>Mature_189_residues
GKPPINQMLPPFYQQFLQQQLGLDKAVFLHILLHTLQTQQNLCLERLANALPLPITVDSRRKAVQRFLLLPSLCLWHLWL
PLLAQIIEHFAVQPQRLVLAIDRTNWWKYNLLMVSLVWDRRALPVFWRLLNHAGNSSLPERRSVLLPVLKYFHHKQIIVL
GDREFGSVGFANWLQSQKVSYCLPASQAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22159; Mature: 22027

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPPINQMLPPFYQQFLQQQLGLDKAVFLHILLHTLQTQQNLCLERLANALPLPITVDS
CCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECH
RRKAVQRFLLLPSLCLWHLWLPLLAQIIEHFAVQPQRLVLAIDRTNWWKYNLLMVSLVWD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHC
RRALPVFWRLLNHAGNSSLPERRSVLLPVLKYFHHKQIIVLGDREFGSVGFANWLQSQKV
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCC
SYCLPASQAQ
CEECCCCCCC
>Mature Secondary Structure 
GKPPINQMLPPFYQQFLQQQLGLDKAVFLHILLHTLQTQQNLCLERLANALPLPITVDS
CCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECH
RRKAVQRFLLLPSLCLWHLWLPLLAQIIEHFAVQPQRLVLAIDRTNWWKYNLLMVSLVWD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHC
RRALPVFWRLLNHAGNSSLPERRSVLLPVLKYFHHKQIIVLGDREFGSVGFANWLQSQKV
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCC
SYCLPASQAQ
CEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA