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The map label for this gene is yjcF [C]

Identifier: 37521689

GI number: 37521689

Start: 2274095

End: 2274931

Strand: Direct

Name: yjcF [C]

Synonym: glr2120

Alternate gene names: 37521689

Gene position: 2274095-2274931 (Clockwise)

Preceding gene: 37521688

Following gene: 37521693

Centisome position: 48.81

GC content: 58.06

Gene sequence:

>837_bases
GTGTTTTTTCTCGACTATTTCAGGGATATCTTTCGAGACTTGTACCAAGCTTGGCAGCACCAGAGAGATGACGCTGCCCG
GGACAAACCAAGAGTGCACAACGCCCAAGAGTTGTTGGAGCGTTATGCGCAGGGCGAGCGCAATTTTGTCAGGGCCGATC
TGGAAAAAGCGGACTTGCGCGGAGTGGACTTGCCGGGGGCTCACTTCATAGACGCGTTCATCAAAGGAGCGGACCTGCGC
AAGGCGAACCTGACCGGGGCGACGTTTGACTACACCGACCTGGAAGGTCTGCTCATCGACGAGAAGACACAGTTGGACAT
CAAATGGCGCACCGTTTGGGAACTTGTCAACCTACCGCCGCTCAAAGGCCGACAACTGCCCGGAGCGGATCTTTCCAGAA
CCCGGCTGACGGGGGTCCATTTGCAGCGGGCTAACCTGGCAGGAGCCGATTTTACAGAGACTTGTTTGGACGAAGCAGAA
CTGCAGGGAGCCGATTTTACAGAGACTTGTTTGGACGAAGCAGAACTGCAGGAAGCGAATCTAGAAGGAGCGGATCTGCG
CGAAGCGAGCTTCGTCAGTGCCAATTTGCGCAGGGCCAATTTGCGCAGGGCCGACTGCCGGGAGAGCGATCTGTTTGATG
CCAACCTGTGCGAGGCCGACCTGCGCGAGGCCAAGCTGCACAAGGCGAACCTCCGACAGGCTCTGCTGGTTAGTGCCGAT
TTGCGCGGGGCGGACCTGCGCGAAGCGGACTTGAGTGGCGCGAACTTGCAGGGAGCCCATTTGGAGGGAGTTCTGCTGGC
CGGGGCCACGATGCCCGATGAAAGCATTCACCCTTGA

Upstream 100 bases:

>100_bases
AGCCCTAGGCTACCTCGGCGGTGCAGCAGCGGGGCAGAGCGCAGCAGAGCAAGCTACAGGCTCTCTACGTCCAGAACCCT
AGTCAAGGAGGCGTAAAGGC

Downstream 100 bases:

>100_bases
ACACTGGAAGCTTACGGTTGCAGGCGGGTGGGCGGCAGCACAGACGCGGGGTCTCGGGGTTACTCTCGATACCATGCTCC
TTCTGGGTGTCGGTACGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFFLDYFRDIFRDLYQAWQHQRDDAARDKPRVHNAQELLERYAQGERNFVRADLEKADLRGVDLPGAHFIDAFIKGADLR
KANLTGATFDYTDLEGLLIDEKTQLDIKWRTVWELVNLPPLKGRQLPGADLSRTRLTGVHLQRANLAGADFTETCLDEAE
LQGADFTETCLDEAELQEANLEGADLREASFVSANLRRANLRRADCRESDLFDANLCEADLREAKLHKANLRQALLVSAD
LRGADLREADLSGANLQGAHLEGVLLAGATMPDESIHP

Sequences:

>Translated_278_residues
MFFLDYFRDIFRDLYQAWQHQRDDAARDKPRVHNAQELLERYAQGERNFVRADLEKADLRGVDLPGAHFIDAFIKGADLR
KANLTGATFDYTDLEGLLIDEKTQLDIKWRTVWELVNLPPLKGRQLPGADLSRTRLTGVHLQRANLAGADFTETCLDEAE
LQGADFTETCLDEAELQEANLEGADLREASFVSANLRRANLRRADCRESDLFDANLCEADLREAKLHKANLRQALLVSAD
LRGADLREADLSGANLQGAHLEGVLLAGATMPDESIHP
>Mature_278_residues
MFFLDYFRDIFRDLYQAWQHQRDDAARDKPRVHNAQELLERYAQGERNFVRADLEKADLRGVDLPGAHFIDAFIKGADLR
KANLTGATFDYTDLEGLLIDEKTQLDIKWRTVWELVNLPPLKGRQLPGADLSRTRLTGVHLQRANLAGADFTETCLDEAE
LQGADFTETCLDEAELQEANLEGADLREASFVSANLRRANLRRADCRESDLFDANLCEADLREAKLHKANLRQALLVSAD
LRGADLREADLSGANLQGAHLEGVLLAGATMPDESIHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=161, Percent_Identity=36.6459627329193, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI221377802, Length=162, Percent_Identity=33.9506172839506, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 31199; Mature: 31199

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLDYFRDIFRDLYQAWQHQRDDAARDKPRVHNAQELLERYAQGERNFVRADLEKADLR
CCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
GVDLPGAHFIDAFIKGADLRKANLTGATFDYTDLEGLLIDEKTQLDIKWRTVWELVNLPP
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCC
LKGRQLPGADLSRTRLTGVHLQRANLAGADFTETCLDEAELQGADFTETCLDEAELQEAN
CCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
LEGADLREASFVSANLRRANLRRADCRESDLFDANLCEADLREAKLHKANLRQALLVSAD
CCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LRGADLREADLSGANLQGAHLEGVLLAGATMPDESIHP
CCCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MFFLDYFRDIFRDLYQAWQHQRDDAARDKPRVHNAQELLERYAQGERNFVRADLEKADLR
CCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
GVDLPGAHFIDAFIKGADLRKANLTGATFDYTDLEGLLIDEKTQLDIKWRTVWELVNLPP
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCC
LKGRQLPGADLSRTRLTGVHLQRANLAGADFTETCLDEAELQGADFTETCLDEAELQEAN
CCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
LEGADLREASFVSANLRRANLRRADCRESDLFDANLCEADLREAKLHKANLRQALLVSAD
CCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LRGADLREADLSGANLQGAHLEGVLLAGATMPDESIHP
CCCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA