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The map label for this gene is cmpB [H]

Identifier: 37521656

GI number: 37521656

Start: 2240369

End: 2241205

Strand: Direct

Name: cmpB [H]

Synonym: gvip280

Alternate gene names: 37521656

Gene position: 2240369-2241205 (Clockwise)

Preceding gene: 37521655

Following gene: 37521657

Centisome position: 48.09

GC content: 63.56

Gene sequence:

>837_bases
ATGACGACGACCCTCGAAGGCCGCCGCCAATCGCCGGTCCAACAACTGCTTGCCGCATTGCCCGATGCCGGGAGCCTGCA
GAAACTCGCAGCGCCGGTGGTGGCGATCGGTGTGTTCCTGCTGCTGTGGCAGCTGTTGACTTTGAGTCCCGACGCCACGC
TGCCGGGACCTGCCAAGGTGGTCTCCGAGACCTGGGGACTGATCGTGGATCCGTTTTTCCGGGGTTCCGGCACCAACCAG
GGGCTCTTCTGGCAGATCGCAGCCAGCCTGCAGCGGGTGGCCCTCGGCTTCAGCCTCGCCGCCGCAGTCGGGATCGTGGT
CGGTATCTTGATCGGTGCCAATGCGCTGATCTACTCGGCCCTCGATCCGCTCTTCCAGGTGCTGCGCACCATTCCGCCCC
TCGCCTGGCTGCCTATCTCACTTGCGGCCATCCAGCAGTCCGAACCTGCGGCGATTTTTGTGATTTTCATTACCGCCATC
TGGCCCATCATCATCAACACGGCGGTAGGCGTCCAGCAGATCCCCCAGGACTACAACAACGTCGCCCGCGTCCTGCAGCT
GTCGCGCCCGAAGTACTTCTTCAAGGTGCTGCTGCCGGCGGCCCTGCCGTATATCTTCACCGGCCTCAAGATTGGCGTCG
GCCTCTCGTGGCTGGCGATCGTGGCGGCGGAGATGCTGATTGGCGGCGTCGGCATCGGCTTTTTTATCTGGGACGCCTAC
AACAGCGCCAAGGTGAGCGAGATCGTGCTCGCCCTGGTCTACGTCGGGCTGGTGGGCCTGTTGCTCGACAAGCTGGTGGG
CTTCATCGGCAAGCTCGTTGCTCCCACCGAGCGCTGA

Upstream 100 bases:

>100_bases
CCGGCCAACACCACCGCCTATCTCAAAGCGCTCAAAATCAAGCGCGTCGCGCTCGCTTGAGCGCACCCCAGCCAACCCAT
AGCCATCCAGGAGAGACGAC

Downstream 100 bases:

>100_bases
AACCCGGCACCTGAAACCTAAAATCTGTCCAATCCAGAGATTGATTTCGATTCACACCTGCAGGAGGACCCTATGATCGA
GCAACAGCCTAGATTCTTCT

Product: bicarbonate transport system permease protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTTTLEGRRQSPVQQLLAALPDAGSLQKLAAPVVAIGVFLLLWQLLTLSPDATLPGPAKVVSETWGLIVDPFFRGSGTNQ
GLFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPISLAAIQQSEPAAIFVIFITAI
WPIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGVGIGFFIWDAY
NSAKVSEIVLALVYVGLVGLLLDKLVGFIGKLVAPTER

Sequences:

>Translated_278_residues
MTTTLEGRRQSPVQQLLAALPDAGSLQKLAAPVVAIGVFLLLWQLLTLSPDATLPGPAKVVSETWGLIVDPFFRGSGTNQ
GLFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPISLAAIQQSEPAAIFVIFITAI
WPIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGVGIGFFIWDAY
NSAKVSEIVLALVYVGLVGLLLDKLVGFIGKLVAPTER
>Mature_277_residues
TTTLEGRRQSPVQQLLAALPDAGSLQKLAAPVVAIGVFLLLWQLLTLSPDATLPGPAKVVSETWGLIVDPFFRGSGTNQG
LFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSALDPLFQVLRTIPPLAWLPISLAAIQQSEPAAIFVIFITAIW
PIIINTAVGVQQIPQDYNNVARVLQLSRPKYFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGVGIGFFIWDAYN
SAKVSEIVLALVYVGLVGLLLDKLVGFIGKLVAPTER

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=165, Percent_Identity=35.7575757575758, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87081802, Length=211, Percent_Identity=32.2274881516588, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29636; Mature: 29504

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTTLEGRRQSPVQQLLAALPDAGSLQKLAAPVVAIGVFLLLWQLLTLSPDATLPGPAKV
CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VSETWGLIVDPFFRGSGTNQGLFWQIAASLQRVALGFSLAAAVGIVVGILIGANALIYSA
HHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPLFQVLRTIPPLAWLPISLAAIQQSEPAAIFVIFITAIWPIIINTAVGVQQIPQDYNN
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARVLQLSRPKYFFKVLLPAALPYIFTGLKIGVGLSWLAIVAAEMLIGGVGIGFFIWDAY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NSAKVSEIVLALVYVGLVGLLLDKLVGFIGKLVAPTER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7647306 [H]