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The map label for this gene is cmpA [H]

Identifier: 37521655

GI number: 37521655

Start: 2238982

End: 2240328

Strand: Direct

Name: cmpA [H]

Synonym: gvip279

Alternate gene names: 37521655

Gene position: 2238982-2240328 (Clockwise)

Preceding gene: 37521654

Following gene: 37521656

Centisome position: 48.06

GC content: 61.17

Gene sequence:

>1347_bases
ATGGCAGGTAAACCACTTGGCCAGAGGGGCGCCGGCGCCCAGGCCGCCGACTTTGAGCAATCTGCACGGTGGAAACCGAC
CAGACGCCAGTTTTTGCAGGTGAGCGGGGCCGCCTCGGCCGGTTTATTGCTGGTACCCGGGTACGCGGGGGCGGCGGACG
CGCCTGAGGTGACGGCGGTTCGGATCGGCTTCGTAGGCCAGACGGACGCGTCGCCCATCATCATCGCCAAGGTCAAAGGG
TACTTCGAGAAGCACGGCCTCAAGGATGTTGAACTGATCAAGCAGCCTTCGTGGGGGGTGACCCGCGATAACCTTGAACT
CGGTTCCAGGGGCGGCGGACTCGATGTGGCGATGGTCCTGCGGCCGATGCCCTTTTTGATGGCCCTCGGGGTGAACACCA
AGGGCAACAAAAAAATTCCCATATATGTGCCGTTGCAACTGAACGTCGACGGGCAGGGGATCACCGTGGCCAAGGTGTTC
AACGCCGAGAATGTCCGCCTCGATGCCTCGGTGATGAAGCCCAAGATTGAAAAGGCCAAAGCCGAGGGCAAAAAGCTCAA
GTTCGCCAGCACCTTCAAAGGCGGCACCAGCGATTTGATGCTGCGCTATTGGCTGGCTGCCGGCGGTATCGACCCGGACA
ACGACATCGATTGCCTGTACGTGCCGGGGCCGCAGCTGGTGGCGAGCATGAAGGTGGGCAATCTGGAGGGTTTCTGCGTG
GGCGACCCCTGGCACGAGCGGGCGATCAGCGAAAAGATCGGCTATTCTGCGGTGATTTCTGGAGAACTCTGGAAGGACCA
TCCCGAAAAAGCCCTCGCCATGCGCGCCGACTGGGCCGACAAGCACCCCAAAGCCGCCCGCGCCATCCTCAAAGGGATTA
TGGAAGCCCAGCAGTGGTGCGACGTGATGACCAACCGCGACGAGTTGTGCACGATTCTCTCCTCGCGCGAGTACGCCAAT
GTGCCGGTGGCCAACATCAACAACCGCCTCAAAGGTTCCATCGAGTACGGCAACAACCGTCCGGTGGTGAGCAACAGTCC
CTACGTGATGCGCTTCTGGCGCGAAAACGCCTCCTATCCCTACAAGAGCCACGATCTCTGGTTTATGACCGAGAATATCC
GCTGGAACTTGCTGCCGGCTGCTACCGATGTCAAGGCGGTGGTGGGGGCGGTCAACCGCGCCGATCTGTGGCAGCAGGCC
GCCAAAGAAGGGGGCATTGCCGCTGCGCAGGTTCCGAAGGTGGCCTCGCGGGGTGTGGAGGTGTTCTTCGACAAGACCCG
CTTCGACCCGGCCAACACCACCGCCTATCTCAAAGCGCTCAAAATCAAGCGCGTCGCGCTCGCTTGA

Upstream 100 bases:

>100_bases
GCGGTCGTGGAGGTCAACGATGCACTGCGGTTCGCTTTGGCGTCGCGGTGCACCTGGCTCCCGACTGGTATCGGCAGCGA
TTTGAAGAAGAGGACACACT

Downstream 100 bases:

>100_bases
GCGCACCCCAGCCAACCCATAGCCATCCAGGAGAGACGACATGACGACGACCCTCGAAGGCCGCCGCCAATCGCCGGTCC
AACAACTGCTTGCCGCATTG

Product: bicarbonate transport system substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAGKPLGQRGAGAQAADFEQSARWKPTRRQFLQVSGAASAGLLLVPGYAGAADAPEVTAVRIGFVGQTDASPIIIAKVKG
YFEKHGLKDVELIKQPSWGVTRDNLELGSRGGGLDVAMVLRPMPFLMALGVNTKGNKKIPIYVPLQLNVDGQGITVAKVF
NAENVRLDASVMKPKIEKAKAEGKKLKFASTFKGGTSDLMLRYWLAAGGIDPDNDIDCLYVPGPQLVASMKVGNLEGFCV
GDPWHERAISEKIGYSAVISGELWKDHPEKALAMRADWADKHPKAARAILKGIMEAQQWCDVMTNRDELCTILSSREYAN
VPVANINNRLKGSIEYGNNRPVVSNSPYVMRFWRENASYPYKSHDLWFMTENIRWNLLPAATDVKAVVGAVNRADLWQQA
AKEGGIAAAQVPKVASRGVEVFFDKTRFDPANTTAYLKALKIKRVALA

Sequences:

>Translated_448_residues
MAGKPLGQRGAGAQAADFEQSARWKPTRRQFLQVSGAASAGLLLVPGYAGAADAPEVTAVRIGFVGQTDASPIIIAKVKG
YFEKHGLKDVELIKQPSWGVTRDNLELGSRGGGLDVAMVLRPMPFLMALGVNTKGNKKIPIYVPLQLNVDGQGITVAKVF
NAENVRLDASVMKPKIEKAKAEGKKLKFASTFKGGTSDLMLRYWLAAGGIDPDNDIDCLYVPGPQLVASMKVGNLEGFCV
GDPWHERAISEKIGYSAVISGELWKDHPEKALAMRADWADKHPKAARAILKGIMEAQQWCDVMTNRDELCTILSSREYAN
VPVANINNRLKGSIEYGNNRPVVSNSPYVMRFWRENASYPYKSHDLWFMTENIRWNLLPAATDVKAVVGAVNRADLWQQA
AKEGGIAAAQVPKVASRGVEVFFDKTRFDPANTTAYLKALKIKRVALA
>Mature_447_residues
AGKPLGQRGAGAQAADFEQSARWKPTRRQFLQVSGAASAGLLLVPGYAGAADAPEVTAVRIGFVGQTDASPIIIAKVKGY
FEKHGLKDVELIKQPSWGVTRDNLELGSRGGGLDVAMVLRPMPFLMALGVNTKGNKKIPIYVPLQLNVDGQGITVAKVFN
AENVRLDASVMKPKIEKAKAEGKKLKFASTFKGGTSDLMLRYWLAAGGIDPDNDIDCLYVPGPQLVASMKVGNLEGFCVG
DPWHERAISEKIGYSAVISGELWKDHPEKALAMRADWADKHPKAARAILKGIMEAQQWCDVMTNRDELCTILSSREYANV
PVANINNRLKGSIEYGNNRPVVSNSPYVMRFWRENASYPYKSHDLWFMTENIRWNLLPAATDVKAVVGAVNRADLWQQAA
KEGGIAAAQVPKVASRGVEVFFDKTRFDPANTTAYLKALKIKRVALA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48897; Mature: 48766

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKPLGQRGAGAQAADFEQSARWKPTRRQFLQVSGAASAGLLLVPGYAGAADAPEVTAV
CCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHEECCCCCCCEEEECCCCCCCCCCCEEEE
RIGFVGQTDASPIIIAKVKGYFEKHGLKDVELIKQPSWGVTRDNLELGSRGGGLDVAMVL
EEEEECCCCCCCEEEEEEHHHHHHCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCHHHHH
RPMPFLMALGVNTKGNKKIPIYVPLQLNVDGQGITVAKVFNAENVRLDASVMKPKIEKAK
CCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEHHHHCCHHHHHH
AEGKKLKFASTFKGGTSDLMLRYWLAAGGIDPDNDIDCLYVPGPQLVASMKVGNLEGFCV
CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHEEEEEECCCCEEEE
GDPWHERAISEKIGYSAVISGELWKDHPEKALAMRADWADKHPKAARAILKGIMEAQQWC
CCHHHHHHHHHHCCCEEEEECCHHHCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH
DVMTNRDELCTILSSREYANVPVANINNRLKGSIEYGNNRPVVSNSPYVMRFWRENASYP
HHHCCHHHHHHHHCCCCCCCCCHHCCCCCEEEEEEECCCCCEECCCCEEEEEEECCCCCC
YKSHDLWFMTENIRWNLLPAATDVKAVVGAVNRADLWQQAAKEGGIAAAQVPKVASRGVE
CCCCCEEEEECCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCEEHHHCCHHHHCCEE
VFFDKTRFDPANTTAYLKALKIKRVALA
EEEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGKPLGQRGAGAQAADFEQSARWKPTRRQFLQVSGAASAGLLLVPGYAGAADAPEVTAV
CCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHEECCCCCCCEEEECCCCCCCCCCCEEEE
RIGFVGQTDASPIIIAKVKGYFEKHGLKDVELIKQPSWGVTRDNLELGSRGGGLDVAMVL
EEEEECCCCCCCEEEEEEHHHHHHCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCHHHHH
RPMPFLMALGVNTKGNKKIPIYVPLQLNVDGQGITVAKVFNAENVRLDASVMKPKIEKAK
CCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEHHHHCCHHHHHH
AEGKKLKFASTFKGGTSDLMLRYWLAAGGIDPDNDIDCLYVPGPQLVASMKVGNLEGFCV
CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHEEEEEECCCCEEEE
GDPWHERAISEKIGYSAVISGELWKDHPEKALAMRADWADKHPKAARAILKGIMEAQQWC
CCHHHHHHHHHHCCCEEEEECCHHHCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHH
DVMTNRDELCTILSSREYANVPVANINNRLKGSIEYGNNRPVVSNSPYVMRFWRENASYP
HHHCCHHHHHHHHCCCCCCCCCHHCCCCCEEEEEEECCCCCEECCCCEEEEEEECCCCCC
YKSHDLWFMTENIRWNLLPAATDVKAVVGAVNRADLWQQAAKEGGIAAAQVPKVASRGVE
CCCCCEEEEECCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCEEHHHCCHHHHCCEE
VFFDKTRFDPANTTAYLKALKIKRVALA
EEEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8437564 [H]