| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yahD [C]
Identifier: 37521636
GI number: 37521636
Start: 2219329
End: 2220252
Strand: Direct
Name: yahD [C]
Synonym: glr2067
Alternate gene names: 37521636
Gene position: 2219329-2220252 (Clockwise)
Preceding gene: 37521635
Following gene: 37521639
Centisome position: 47.64
GC content: 59.96
Gene sequence:
>924_bases GTGGGACACCCCTCAGGAGGTCTCTATGATCCCGGAAGAATCAGATCCATCCCGACGAACAGAAACCCGATGGTTGATCA AAAACTGATTCTCGCCATACAGAGAGCTGAAATCGCGCAAATTCGGCGATTGCTCGCAGATGGGGTGTCACCCAATGGTC CTACAGTGGCCCCGTTGTTCGGCACCCGACCCCAGACATTGCCTTTGATCGAAGCCATTCGTTGTCGGCAAAAAGAGATC GTTCATCTGTTGCTCGAAGCGGGAGCAGACCCGCAGGCCTCCGAATATTCCGGGGCGACACCGCTTGCAATGGCAGTCCA CCTGAATTTTCAGGAGGCGGTACAGTTTTTGCTCGCCAAAGGAGCGAACGCAGAAACCGATCGACATTTGCGCAGTCCGA ACGCACTAGTGCAAGCGATCAGGATTGGCGACAGCCATGCGGTGCGTCGGCAGTTGGAGGATGGCGCATCTGCGGAAGGG CAGGCAGGTTTGCTCAAAGCGTTGGTGCGGCCGGAGGCGGTCCCTCTGGTCGAGGCGGTGCGCGGTGGGCAGCAAGAGAT TGTGCGCCTGCTGCTTGAAGCGGGAGCCAATCCAAACGCGGCGGATAAACGCGGAGCCCTGCCTCTGAAGCTCGCAGTCC ATCTGGGCAGCGAACCCATCGTCCGGCTACTTCTGGAGCACGGAGCCGATCCCAACAAACGCGCCAGTGGCGAGACCACC AGTGCGCTCCAGCACGCCGCCTTCTACGGACATGTCGAATTGGTGCGTGTGCTGCTGGAGCACGGCGGGAACCCCGCCGC GGTCCTGCAAACCAAGTCCCTGTTTCGCATTCGCGGGCCGATTTTGCAGATGCTCATCGACGCGGGCGGCGAAGCGCCGG AGGAGATTCTGCAGATGCTGCGCGAAGGTTCGGCTTTGCCGTAA
Upstream 100 bases:
>100_bases GAACTCCCCGCTCCCCGGGTTCGGTCTTCAAGGTCGATGCCCTAAATAACTATGAAAAGCTTCCCTACAAAGGACAAATC TCTTGTCCGAAAGTGCGAGC
Downstream 100 bases:
>100_bases GCAGGTGTCAGGACCAAACCGCTGCCCGTCAGGTTTTCCTAGACCTTTGCCTCGACCGCTTTACTCCCCATTCCATGCGC AGCCTAGCGACCGGCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGHPSGGLYDPGRIRSIPTNRNPMVDQKLILAIQRAEIAQIRRLLADGVSPNGPTVAPLFGTRPQTLPLIEAIRCRQKEI VHLLLEAGADPQASEYSGATPLAMAVHLNFQEAVQFLLAKGANAETDRHLRSPNALVQAIRIGDSHAVRRQLEDGASAEG QAGLLKALVRPEAVPLVEAVRGGQQEIVRLLLEAGANPNAADKRGALPLKLAVHLGSEPIVRLLLEHGADPNKRASGETT SALQHAAFYGHVELVRVLLEHGGNPAAVLQTKSLFRIRGPILQMLIDAGGEAPEEILQMLREGSALP
Sequences:
>Translated_307_residues MGHPSGGLYDPGRIRSIPTNRNPMVDQKLILAIQRAEIAQIRRLLADGVSPNGPTVAPLFGTRPQTLPLIEAIRCRQKEI VHLLLEAGADPQASEYSGATPLAMAVHLNFQEAVQFLLAKGANAETDRHLRSPNALVQAIRIGDSHAVRRQLEDGASAEG QAGLLKALVRPEAVPLVEAVRGGQQEIVRLLLEAGANPNAADKRGALPLKLAVHLGSEPIVRLLLEHGADPNKRASGETT SALQHAAFYGHVELVRVLLEHGGNPAAVLQTKSLFRIRGPILQMLIDAGGEAPEEILQMLREGSALP >Mature_306_residues GHPSGGLYDPGRIRSIPTNRNPMVDQKLILAIQRAEIAQIRRLLADGVSPNGPTVAPLFGTRPQTLPLIEAIRCRQKEIV HLLLEAGADPQASEYSGATPLAMAVHLNFQEAVQFLLAKGANAETDRHLRSPNALVQAIRIGDSHAVRRQLEDGASAEGQ AGLLKALVRPEAVPLVEAVRGGQQEIVRLLLEAGANPNAADKRGALPLKLAVHLGSEPIVRLLLEHGADPNKRASGETTS ALQHAAFYGHVELVRVLLEHGGNPAAVLQTKSLFRIRGPILQMLIDAGGEAPEEILQMLREGSALP
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 8 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI32967601, Length=229, Percent_Identity=31.8777292576419, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI188595682, Length=193, Percent_Identity=34.1968911917098, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI52426737, Length=193, Percent_Identity=34.1968911917098, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI255982572, Length=182, Percent_Identity=32.4175824175824, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI22208951, Length=182, Percent_Identity=32.4175824175824, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI7705831, Length=182, Percent_Identity=32.4175824175824, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI70780355, Length=215, Percent_Identity=33.953488372093, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI70780357, Length=215, Percent_Identity=33.953488372093, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI70780353, Length=215, Percent_Identity=33.953488372093, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI215598574, Length=215, Percent_Identity=33.953488372093, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI52426735, Length=190, Percent_Identity=34.2105263157895, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI70780359, Length=215, Percent_Identity=33.953488372093, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI87239981, Length=251, Percent_Identity=30.2788844621514, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI38683807, Length=202, Percent_Identity=32.1782178217822, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI38683816, Length=202, Percent_Identity=32.1782178217822, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI13376842, Length=249, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI37620163, Length=200, Percent_Identity=32.5, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI46519147, Length=200, Percent_Identity=32.5, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI55741641, Length=266, Percent_Identity=28.9473684210526, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI22208957, Length=233, Percent_Identity=30.9012875536481, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI70995267, Length=182, Percent_Identity=31.8681318681319, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI10863929, Length=247, Percent_Identity=32.3886639676113, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI67906195, Length=202, Percent_Identity=33.1683168316832, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI18252778, Length=231, Percent_Identity=29.4372294372294, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI68131557, Length=240, Percent_Identity=29.5833333333333, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI30425444, Length=265, Percent_Identity=30.5660377358491, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI46519151, Length=204, Percent_Identity=32.843137254902, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI46519154, Length=204, Percent_Identity=32.843137254902, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI268607595, Length=233, Percent_Identity=30.9012875536481, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI62988328, Length=233, Percent_Identity=30.9012875536481, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI14149716, Length=190, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI34304379, Length=254, Percent_Identity=27.1653543307087, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71981389, Length=195, Percent_Identity=35.3846153846154, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI25145251, Length=195, Percent_Identity=35.3846153846154, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17542700, Length=195, Percent_Identity=35.3846153846154, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71981414, Length=195, Percent_Identity=35.3846153846154, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71981411, Length=192, Percent_Identity=35.4166666666667, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17541900, Length=189, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17541898, Length=189, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193206531, Length=189, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193206533, Length=189, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28571867, Length=252, Percent_Identity=26.984126984127, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI28571865, Length=252, Percent_Identity=26.984126984127, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI281359521, Length=201, Percent_Identity=36.318407960199, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281359519, Length=201, Percent_Identity=36.318407960199, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28558752, Length=201, Percent_Identity=36.318407960199, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28558750, Length=201, Percent_Identity=36.318407960199, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28558756, Length=201, Percent_Identity=36.318407960199, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28558754, Length=201, Percent_Identity=36.318407960199, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24581260, Length=202, Percent_Identity=31.1881188118812, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24581258, Length=202, Percent_Identity=31.1881188118812, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI161082099, Length=191, Percent_Identity=33.5078534031414, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI161082081, Length=191, Percent_Identity=33.5078534031414, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI161082085, Length=191, Percent_Identity=33.5078534031414, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI161082110, Length=191, Percent_Identity=33.5078534031414, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI161082089, Length=191, Percent_Identity=33.5078534031414, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI161082096, Length=191, Percent_Identity=33.5078534031414, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI161082106, Length=191, Percent_Identity=33.5078534031414, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI161082092, Length=191, Percent_Identity=33.5078534031414, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356741, Length=253, Percent_Identity=26.8774703557312, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650843, Length=189, Percent_Identity=32.2751322751323, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: PF00023 Ank [H]
EC number: NA
Molecular weight: Translated: 32822; Mature: 32691
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHPSGGLYDPGRIRSIPTNRNPMVDQKLILAIQRAEIAQIRRLLADGVSPNGPTVAPLF CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC GTRPQTLPLIEAIRCRQKEIVHLLLEAGADPQASEYSGATPLAMAVHLNFQEAVQFLLAK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHC GANAETDRHLRSPNALVQAIRIGDSHAVRRQLEDGASAEGQAGLLKALVRPEAVPLVEAV CCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHH RGGQQEIVRLLLEAGANPNAADKRGALPLKLAVHLGSEPIVRLLLEHGADPNKRASGETT CCCHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHH SALQHAAFYGHVELVRVLLEHGGNPAAVLQTKSLFRIRGPILQMLIDAGGEAPEEILQML HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH REGSALP HCCCCCC >Mature Secondary Structure GHPSGGLYDPGRIRSIPTNRNPMVDQKLILAIQRAEIAQIRRLLADGVSPNGPTVAPLF CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC GTRPQTLPLIEAIRCRQKEIVHLLLEAGADPQASEYSGATPLAMAVHLNFQEAVQFLLAK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHC GANAETDRHLRSPNALVQAIRIGDSHAVRRQLEDGASAEGQAGLLKALVRPEAVPLVEAV CCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHH RGGQQEIVRLLLEAGANPNAADKRGALPLKLAVHLGSEPIVRLLLEHGADPNKRASGETT CCCHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHH SALQHAAFYGHVELVRVLLEHGGNPAAVLQTKSLFRIRGPILQMLIDAGGEAPEEILQML HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH REGSALP HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792869 [H]