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The map label for this gene is ybhS [H]

Identifier: 37521585

GI number: 37521585

Start: 2167485

End: 2168585

Strand: Direct

Name: ybhS [H]

Synonym: glr2016

Alternate gene names: 37521585

Gene position: 2167485-2168585 (Clockwise)

Preceding gene: 37521584

Following gene: 37521586

Centisome position: 46.52

GC content: 64.4

Gene sequence:

>1101_bases
ATGAAACGCATCCTCTCCCAGTGCGCCAAAGAACTCACCCAGTTTCGCCGCGACCGGCTCACCGTCGCCCTCGCGGTATT
GTTGCCGATGGCGACATTGTTGATATTTGGCTATGCCATCCGCCTGGAGGCCAACAACATTCCGCTGGCGGTGCAGGATC
TCGATCGCTCTCCCACCAGCCGCGCCTTTGTCGAGCGCTTCTATGCCACCAATCAGTTCGCGCCGGTCGACTGGGACGGC
CGGGGCAATCCCGAAGCGCTGCTCGATGCCGGGGTGGCCAGGGTGGTCGTGATTATCCCCCCGGATTTCAGCCGCCGCCT
GGACGCCGGTAAGATTGCCCCCGTCCAGGCGCTCATCGACGGCACCGACGGCAACAACGCCCGGGTCATCCGCAACAGCG
TGCGCTCGGTGACCAACTTTTATTTGGGCACCCGCTCGGACACAGCCCCGGCAATTACCCTGCGCTCGCGGCTGTGGTTC
AACCCGGGGCGCGAAGAGGCGCTCTACATCGTGCCGGGGGTGTTCGCGGTGGTGCTCGCCATCTGGCCGCCGCTGTTGAT
GGCCATCGCCATGGTGCGCGAAAAGGAACAGGGCACGATTATCCAGGTGTACGCCTCCAGCCTGAGCGCGGCCGAATTTT
TGTTGGGCAAGGGGCTCGCCTACTTTCTGGTCGGGGTCGCCCAGGCGGTGGCGGTGTTTGCCCTCGGGGCGGTGCTGTTT
GGCCTGCGCCTGGCGGGTGACCCGACCCCTCTGGTGGTGGGCACCGTGCTGATGATCGCGGCGAGCGTCTCTTTTGGGCT
TTTTATCGGCACGCGCACCGCCAGCCAGAGTGCGGCGGTGCAGGCGGTGGCCACCAGCGGCTTTCTCACCGCCCTGTTGC
TTTCGGGGTTTATCTACCCGCTCAGCAACATTCCTTTTCCACTCTCGCTGGTGGCCAACATCGTTCCGGCCCGCTACTTT
ATCGAGATTACCCGCGACGCCTTTGTGCGGGGCACCGGTTGGCCGGGGGTGTGGTCCGCACCGCTGCTGCTCGCCGTGCT
GGGGGGGGTGTTTTTTATGGCGAGCTTCCGCAACCTCAAACGCATGCAACTGCCGGGGTAG

Upstream 100 bases:

>100_bases
CCCTGGAGCGGCTGCGGGCGCTGGGGCGCACCCGGGAAATCGGCTACTCGCTGGAGGACGCCTTTATCGCGATGGTCCAG
CGCGCCCGCCGGGAGGCGCC

Downstream 100 bases:

>100_bases
GGTTATGAAATTTCTCGAAAGCCTGCTTGAGAGCCGTTTGTGGGCATTGATGCGCAAAGAGACTACCCAGATTCTCAAAA
ACCGGCAGCTGCTTTTTTTG

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKRILSQCAKELTQFRRDRLTVALAVLLPMATLLIFGYAIRLEANNIPLAVQDLDRSPTSRAFVERFYATNQFAPVDWDG
RGNPEALLDAGVARVVVIIPPDFSRRLDAGKIAPVQALIDGTDGNNARVIRNSVRSVTNFYLGTRSDTAPAITLRSRLWF
NPGREEALYIVPGVFAVVLAIWPPLLMAIAMVREKEQGTIIQVYASSLSAAEFLLGKGLAYFLVGVAQAVAVFALGAVLF
GLRLAGDPTPLVVGTVLMIAASVSFGLFIGTRTASQSAAVQAVATSGFLTALLLSGFIYPLSNIPFPLSLVANIVPARYF
IEITRDAFVRGTGWPGVWSAPLLLAVLGGVFFMASFRNLKRMQLPG

Sequences:

>Translated_366_residues
MKRILSQCAKELTQFRRDRLTVALAVLLPMATLLIFGYAIRLEANNIPLAVQDLDRSPTSRAFVERFYATNQFAPVDWDG
RGNPEALLDAGVARVVVIIPPDFSRRLDAGKIAPVQALIDGTDGNNARVIRNSVRSVTNFYLGTRSDTAPAITLRSRLWF
NPGREEALYIVPGVFAVVLAIWPPLLMAIAMVREKEQGTIIQVYASSLSAAEFLLGKGLAYFLVGVAQAVAVFALGAVLF
GLRLAGDPTPLVVGTVLMIAASVSFGLFIGTRTASQSAAVQAVATSGFLTALLLSGFIYPLSNIPFPLSLVANIVPARYF
IEITRDAFVRGTGWPGVWSAPLLLAVLGGVFFMASFRNLKRMQLPG
>Mature_366_residues
MKRILSQCAKELTQFRRDRLTVALAVLLPMATLLIFGYAIRLEANNIPLAVQDLDRSPTSRAFVERFYATNQFAPVDWDG
RGNPEALLDAGVARVVVIIPPDFSRRLDAGKIAPVQALIDGTDGNNARVIRNSVRSVTNFYLGTRSDTAPAITLRSRLWF
NPGREEALYIVPGVFAVVLAIWPPLLMAIAMVREKEQGTIIQVYASSLSAAEFLLGKGLAYFLVGVAQAVAVFALGAVLF
GLRLAGDPTPLVVGTVLMIAASVSFGLFIGTRTASQSAAVQAVATSGFLTALLLSGFIYPLSNIPFPLSLVANIVPARYF
IEITRDAFVRGTGWPGVWSAPLLLAVLGGVFFMASFRNLKRMQLPG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=337, Percent_Identity=27.299703264095, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787010, Length=351, Percent_Identity=28.2051282051282, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI48994943, Length=359, Percent_Identity=27.8551532033426, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI226510979, Length=380, Percent_Identity=24.2105263157895, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 39486; Mature: 39486

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILSQCAKELTQFRRDRLTVALAVLLPMATLLIFGYAIRLEANNIPLAVQDLDRSPTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCHH
RAFVERFYATNQFAPVDWDGRGNPEALLDAGVARVVVIIPPDFSRRLDAGKIAPVQALID
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCHHHCCCCCCCCHHHHEEE
GTDGNNARVIRNSVRSVTNFYLGTRSDTAPAITLRSRLWFNPGREEALYIVPGVFAVVLA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCCCCCCEEEECHHHHHHHHH
IWPPLLMAIAMVREKEQGTIIQVYASSLSAAEFLLGKGLAYFLVGVAQAVAVFALGAVLF
HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLRLAGDPTPLVVGTVLMIAASVSFGLFIGTRTASQSAAVQAVATSGFLTALLLSGFIYP
HHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSNIPFPLSLVANIVPARYFIEITRDAFVRGTGWPGVWSAPLLLAVLGGVFFMASFRNLK
HCCCCCCHHHHHHHHCHHHHEEEHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMQLPG
HCCCCC
>Mature Secondary Structure
MKRILSQCAKELTQFRRDRLTVALAVLLPMATLLIFGYAIRLEANNIPLAVQDLDRSPTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCHH
RAFVERFYATNQFAPVDWDGRGNPEALLDAGVARVVVIIPPDFSRRLDAGKIAPVQALID
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCHHHCCCCCCCCHHHHEEE
GTDGNNARVIRNSVRSVTNFYLGTRSDTAPAITLRSRLWFNPGREEALYIVPGVFAVVLA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCCCCCCEEEECHHHHHHHHH
IWPPLLMAIAMVREKEQGTIIQVYASSLSAAEFLLGKGLAYFLVGVAQAVAVFALGAVLF
HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GLRLAGDPTPLVVGTVLMIAASVSFGLFIGTRTASQSAAVQAVATSGFLTALLLSGFIYP
HHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSNIPFPLSLVANIVPARYFIEITRDAFVRGTGWPGVWSAPLLLAVLGGVFFMASFRNLK
HCCCCCCHHHHHHHHCHHHHEEEHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMQLPG
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]