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The map label for this gene is yjcF [C]

Identifier: 37521502

GI number: 37521502

Start: 2056786

End: 2057607

Strand: Direct

Name: yjcF [C]

Synonym: glr1933

Alternate gene names: 37521502

Gene position: 2056786-2057607 (Clockwise)

Preceding gene: 37521501

Following gene: 37521534

Centisome position: 44.15

GC content: 57.91

Gene sequence:

>822_bases
ATGTTTATTGTCGACTATTTCAGGGACATCTTTCGAGACTTGTATAAAGCTTGGCAGCACGACCGAGACGTCGCCGCCCA
GGACAAGCAAACGGTGCACAACGCCCAGGAGTTGCTGGAGCGCTACGCTCGGGGTGAGCGCTATTTCATTTTGGCCGATC
TAGAAAAAGAAGACTTGCGCAACGTGGAGTTGCCGGGTGCTCATTTCATCCGTGCGTTCCTCAAAGGAGCGGACCTGCGC
GGGGCAAACTTAAGCGGGGCGACGTTTACTTTCACGAGTTTGAGGGGCCTACTCATCGACGATACGACGCAGGTGGACAT
CAAATGGCGGACGGTGTGGGAACTGGTCAACCTGCCGCCGGTCACCGGTCGCCAACTGCTGGGAGCGGATCTTTCCTGGA
CCCGGCTGACGGGGGTGCATTTGCAACGGGCCAACCTGACGGGGGCTGATCTTACAGAGACTTGCTTGGACGAAGCAGAA
CTGCAGGAAGCGAATCTGCAGGGGGCAAATCTATGCGAGGCACGTTTTGTCAGTACCAATTTGCGGGGAGTGAACCTCAG
GGGGGCGGATTGCCAAGAGGCCAACCTGTTTGATGCCAACCTGTGCGATACCGATTTGCGCGAAGCCAACCTCTCCAAGG
CGAACCTGATTGAAGCTGTGCTGGTCAGTGCCGATTTGCGCGGGGCGGACCTGCGCGGGGCGAACCTCGACAGTGCGAAC
TGCCAGGGAGCGAATCTAGAAGGGGCGAATCTGGAAGGGGCGAATCTGGAGGGAGTGCTGCTGGGCAGGGCGACGATGCC
CGACGGGAGTATTCATCCTTAA

Upstream 100 bases:

>100_bases
AGCGATGGGGTATTTGGGCGGTTCAGCACTGGGGCAGAGCGCAGCAGAACGAGCTACAGGCTCTCCACGGCCACAACCCT
AGCCAAGGAGGCGTAGAGGG

Downstream 100 bases:

>100_bases
AATTACGGCTGCAAAGCGCTGAGCAGGAGCAGTTGCACCCGAGCTGACGTTACTTCAGATCAAAAAAGAGCCGAGGCGGT
CGGCCATACTGGCAAGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MFIVDYFRDIFRDLYKAWQHDRDVAAQDKQTVHNAQELLERYARGERYFILADLEKEDLRNVELPGAHFIRAFLKGADLR
GANLSGATFTFTSLRGLLIDDTTQVDIKWRTVWELVNLPPVTGRQLLGADLSWTRLTGVHLQRANLTGADLTETCLDEAE
LQEANLQGANLCEARFVSTNLRGVNLRGADCQEANLFDANLCDTDLREANLSKANLIEAVLVSADLRGADLRGANLDSAN
CQGANLEGANLEGANLEGVLLGRATMPDGSIHP

Sequences:

>Translated_273_residues
MFIVDYFRDIFRDLYKAWQHDRDVAAQDKQTVHNAQELLERYARGERYFILADLEKEDLRNVELPGAHFIRAFLKGADLR
GANLSGATFTFTSLRGLLIDDTTQVDIKWRTVWELVNLPPVTGRQLLGADLSWTRLTGVHLQRANLTGADLTETCLDEAE
LQEANLQGANLCEARFVSTNLRGVNLRGADCQEANLFDANLCDTDLREANLSKANLIEAVLVSADLRGADLRGANLDSAN
CQGANLEGANLEGANLEGVLLGRATMPDGSIHP
>Mature_273_residues
MFIVDYFRDIFRDLYKAWQHDRDVAAQDKQTVHNAQELLERYARGERYFILADLEKEDLRNVELPGAHFIRAFLKGADLR
GANLSGATFTFTSLRGLLIDDTTQVDIKWRTVWELVNLPPVTGRQLLGADLSWTRLTGVHLQRANLTGADLTETCLDEAE
LQEANLQGANLCEARFVSTNLRGVNLRGADCQEANLFDANLCDTDLREANLSKANLIEAVLVSADLRGADLRGANLDSAN
CQGANLEGANLEGANLEGVLLGRATMPDGSIHP

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Drosophila melanogaster, GI221377802, Length=182, Percent_Identity=35.1648351648352, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 30153; Mature: 30153

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIVDYFRDIFRDLYKAWQHDRDVAAQDKQTVHNAQELLERYARGERYFILADLEKEDLR
CEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCC
NVELPGAHFIRAFLKGADLRGANLSGATFTFTSLRGLLIDDTTQVDIKWRTVWELVNLPP
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHCCEEEECCCEEEEEEHHHHHHHHCCCC
VTGRQLLGADLSWTRLTGVHLQRANLTGADLTETCLDEAELQEANLQGANLCEARFVSTN
CCCHHHHCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEECC
LRGVNLRGADCQEANLFDANLCDTDLREANLSKANLIEAVLVSADLRGADLRGANLDSAN
CCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
CQGANLEGANLEGANLEGVLLGRATMPDGSIHP
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MFIVDYFRDIFRDLYKAWQHDRDVAAQDKQTVHNAQELLERYARGERYFILADLEKEDLR
CEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHCC
NVELPGAHFIRAFLKGADLRGANLSGATFTFTSLRGLLIDDTTQVDIKWRTVWELVNLPP
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHCCEEEECCCEEEEEEHHHHHHHHCCCC
VTGRQLLGADLSWTRLTGVHLQRANLTGADLTETCLDEAELQEANLQGANLCEARFVSTN
CCCHHHHCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHEEECC
LRGVNLRGADCQEANLFDANLCDTDLREANLSKANLIEAVLVSADLRGADLRGANLDSAN
CCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
CQGANLEGANLEGANLEGVLLGRATMPDGSIHP
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA