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The map label for this gene is pdtaS [H]

Identifier: 37521336

GI number: 37521336

Start: 1873534

End: 1875546

Strand: Direct

Name: pdtaS [H]

Synonym: glr1767

Alternate gene names: 37521336

Gene position: 1873534-1875546 (Clockwise)

Preceding gene: 37521334

Following gene: 37521337

Centisome position: 40.21

GC content: 60.85

Gene sequence:

>2013_bases
ATGCAAGACGAAAACACGGCCAGGGAGCGATCCCCCATGGGAGGTGCAGCTTTGCGCCGCTTTATAGAGAGGGTGAAAGG
GACGCACCTGCACAAACGACGGCTGCGAAGGCTCGCTTGCGATTGCGAGGTGCAGCTGCACAGTGCCGAGCGGCAGATCC
GATTTTTCCTGGAAAGCACCACCGATGCGTTTGTCGCCCTCGATCGCCAATGGCGTATCACTTATGCCAACCAGCGCGTT
GCTGCCCTCAACCACCTGCCCCTCGAGCAAATTGTCGGCAAGACGCACTGGCAGATGTGGCCCTGGTCGGTGGGTAGCCG
GGTGGAGCAGGAATACCGCCGGGCCGTCGATGAGCAGAGCGAGGCACACTTCGAGATTCTCTACGAACCGCTCCAGCTGT
GGCTGGAAATCCACGCCTACCCCTCGCCGGATGGGCTGGCCATCTTCTTTCGCGACATCACCGAGCAAAAGCAGACCCAG
CAGTGGCTGGGTCTGCTGGCGCAGGCGAGCGAGGTGTTCGCCGCTTCGCTCGATTACCGCACGACTTTGCAGAATGTCGC
CCAACTGGTCGTCACGGTCATGGCGGACTGGTGCTTGATCGACATTGTCGAAAACGAGCAGATCGCCTTTACCAACCCGA
TCGTTGCCGCTGCCGACCCGGAGTTGGTGCAGCTGCTGCGCGATTTGAGGCATCTCTATCCGCTTTCCCGCGACGCGGAT
TACGGTGCGCCCCGGGTGTTTCGTACCGGTGAACCGATCCTCGCAGAGGTGATCCCCGAGAGCTTTTATGCAAGCTTCTG
CGTCAGCGAACAGCAACTCGACATGCTGCAGCGGCTGGACGCCTGCTCCTACATCATCGTGCCGCTCGTTGCCCACGGAC
AGACGCTCGGCACGCTCGTGCTCGCCTCGGGGCGCACACTTTCCGGGCGCCATTACAGCGACCGGGATCTCAAAACAGCA
GAAGAACTGGCCCGCCGCGCCTCGATATCGGTCGACAACGCGCGCGCCCACCGGGCAGAGCAGCAGGCGCGCAGCCAGGC
CGAGACAGCGCGCGCAAAGCTCATCGATACACTCGACAGCATCACCGATGCATTCGTCGCCCTCGATCCTGAGTGGCGCG
TCAGCTATGTCAACCGGCTGGCAGCGAAATTCAGCGCCAAAACCCAGCAAGCGTTGATAGGCAAAAATGTCTGGGAGGAA
TGGCCCGGGTTGGTGGGGACTCGCTTTGAGACGGAATGCCGCCGGGCGGTGGTCGAGCAGGTGGCTGTTCACCTGGAGGA
ATTTGATGTTCCCTCGAACCTCTGGTTCGAAGTGCACGCCTACCCGTCGAGCGACGGTCTGGGAATTTACTTTCGCGACA
TCACCGAGCGCCGCCGCTTCGAGCGACAAATCATCGCTTCGCTACAAGAAAAAGAAGTGCTGCTGCGGGAGATCCACCAC
CGGGTCAAAAACAATCTGCAGGTTGTCACAAGCCTGCTGCGCCTGCAGGCCCATCAAACCGTTGACGCAGCCTCCATCGA
GGCGCTTCAGACCTGCCGAAGGCGGGTGCAGTCGATGGCCTCCATTCACGAACTGCTCTACCAGTCGGGGGATCTGGCCA
GCGTCGACTTTGGCGAGTACGTCCGGCTCATCGGGCACCAGCTGATCCGCTCCTACAGAGCACGACCAGGAAAAGTGCGA
CTGAAGATGGAAGCATGCAGTGTACGTCTGGACCTGGCGATGGCGATTCCTTGCGGCCTGATTGTCAACGAACTGATCTC
CAACAGCCTCAAGCACGCCTTTGCGCGGGACAAGCGCAACCGGATCGGCGTCAGGCTCAGCCAGAGCGAGCAGACGGTCA
CTTTGCTGGTCGAGGACAACGGCAGTGGGCTGCCTGCCGATTTTGACCCGGCCAAGCTCGAATCGCTGGGGCTGCAACTG
GTAAACGACTTGGCCCTACAACTTGGGGGAAGCGTTGTGTTCTCGGGTGCCCAGGGTACCTCGGTGCGCGTGACTTTCCC
GGTTCATCGCTAG

Upstream 100 bases:

>100_bases
GCTGCTTGTGCCGTTGCTTTTTGCATCGCCGAAGGTTTCCCTCTATTTGCTTGCTTGAAATCTTCCCCGGCACTCGAAGC
ACACTTTGCGGGATCCCACG

Downstream 100 bases:

>100_bases
GAGGAGGCAACCGGCTATGCGCAAGCTCAACATCATGGTGGTGGAGGACGAGCGCATTGTCGCGCGGGATGTACAAAAAA
TTCTCGAGGCGATGGGTCAC

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MQDENTARERSPMGGAALRRFIERVKGTHLHKRRLRRLACDCEVQLHSAERQIRFFLESTTDAFVALDRQWRITYANQRV
AALNHLPLEQIVGKTHWQMWPWSVGSRVEQEYRRAVDEQSEAHFEILYEPLQLWLEIHAYPSPDGLAIFFRDITEQKQTQ
QWLGLLAQASEVFAASLDYRTTLQNVAQLVVTVMADWCLIDIVENEQIAFTNPIVAAADPELVQLLRDLRHLYPLSRDAD
YGAPRVFRTGEPILAEVIPESFYASFCVSEQQLDMLQRLDACSYIIVPLVAHGQTLGTLVLASGRTLSGRHYSDRDLKTA
EELARRASISVDNARAHRAEQQARSQAETARAKLIDTLDSITDAFVALDPEWRVSYVNRLAAKFSAKTQQALIGKNVWEE
WPGLVGTRFETECRRAVVEQVAVHLEEFDVPSNLWFEVHAYPSSDGLGIYFRDITERRRFERQIIASLQEKEVLLREIHH
RVKNNLQVVTSLLRLQAHQTVDAASIEALQTCRRRVQSMASIHELLYQSGDLASVDFGEYVRLIGHQLIRSYRARPGKVR
LKMEACSVRLDLAMAIPCGLIVNELISNSLKHAFARDKRNRIGVRLSQSEQTVTLLVEDNGSGLPADFDPAKLESLGLQL
VNDLALQLGGSVVFSGAQGTSVRVTFPVHR

Sequences:

>Translated_670_residues
MQDENTARERSPMGGAALRRFIERVKGTHLHKRRLRRLACDCEVQLHSAERQIRFFLESTTDAFVALDRQWRITYANQRV
AALNHLPLEQIVGKTHWQMWPWSVGSRVEQEYRRAVDEQSEAHFEILYEPLQLWLEIHAYPSPDGLAIFFRDITEQKQTQ
QWLGLLAQASEVFAASLDYRTTLQNVAQLVVTVMADWCLIDIVENEQIAFTNPIVAAADPELVQLLRDLRHLYPLSRDAD
YGAPRVFRTGEPILAEVIPESFYASFCVSEQQLDMLQRLDACSYIIVPLVAHGQTLGTLVLASGRTLSGRHYSDRDLKTA
EELARRASISVDNARAHRAEQQARSQAETARAKLIDTLDSITDAFVALDPEWRVSYVNRLAAKFSAKTQQALIGKNVWEE
WPGLVGTRFETECRRAVVEQVAVHLEEFDVPSNLWFEVHAYPSSDGLGIYFRDITERRRFERQIIASLQEKEVLLREIHH
RVKNNLQVVTSLLRLQAHQTVDAASIEALQTCRRRVQSMASIHELLYQSGDLASVDFGEYVRLIGHQLIRSYRARPGKVR
LKMEACSVRLDLAMAIPCGLIVNELISNSLKHAFARDKRNRIGVRLSQSEQTVTLLVEDNGSGLPADFDPAKLESLGLQL
VNDLALQLGGSVVFSGAQGTSVRVTFPVHR
>Mature_670_residues
MQDENTARERSPMGGAALRRFIERVKGTHLHKRRLRRLACDCEVQLHSAERQIRFFLESTTDAFVALDRQWRITYANQRV
AALNHLPLEQIVGKTHWQMWPWSVGSRVEQEYRRAVDEQSEAHFEILYEPLQLWLEIHAYPSPDGLAIFFRDITEQKQTQ
QWLGLLAQASEVFAASLDYRTTLQNVAQLVVTVMADWCLIDIVENEQIAFTNPIVAAADPELVQLLRDLRHLYPLSRDAD
YGAPRVFRTGEPILAEVIPESFYASFCVSEQQLDMLQRLDACSYIIVPLVAHGQTLGTLVLASGRTLSGRHYSDRDLKTA
EELARRASISVDNARAHRAEQQARSQAETARAKLIDTLDSITDAFVALDPEWRVSYVNRLAAKFSAKTQQALIGKNVWEE
WPGLVGTRFETECRRAVVEQVAVHLEEFDVPSNLWFEVHAYPSSDGLGIYFRDITERRRFERQIIASLQEKEVLLREIHH
RVKNNLQVVTSLLRLQAHQTVDAASIEALQTCRRRVQSMASIHELLYQSGDLASVDFGEYVRLIGHQLIRSYRARPGKVR
LKMEACSVRLDLAMAIPCGLIVNELISNSLKHAFARDKRNRIGVRLSQSEQTVTLLVEDNGSGLPADFDPAKLESLGLQL
VNDLALQLGGSVVFSGAQGTSVRVTFPVHR

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 76017; Mature: 76017

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDENTARERSPMGGAALRRFIERVKGTHLHKRRLRRLACDCEVQLHSAERQIRFFLEST
CCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCC
TDAFVALDRQWRITYANQRVAALNHLPLEQIVGKTHWQMWPWSVGSRVEQEYRRAVDEQS
CCHHEEECCCEEEEECCCHHHHHHCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCC
EAHFEILYEPLQLWLEIHAYPSPDGLAIFFRDITEQKQTQQWLGLLAQASEVFAASLDYR
CHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TTLQNVAQLVVTVMADWCLIDIVENEQIAFTNPIVAAADPELVQLLRDLRHLYPLSRDAD
HHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCEEECCCHHHHHHHHHHHHHCCCCCCCC
YGAPRVFRTGEPILAEVIPESFYASFCVSEQQLDMLQRLDACSYIIVPLVAHGQTLGTLV
CCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE
LASGRTLSGRHYSDRDLKTAEELARRASISVDNARAHRAEQQARSQAETARAKLIDTLDS
EECCCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITDAFVALDPEWRVSYVNRLAAKFSAKTQQALIGKNVWEEWPGLVGTRFETECRRAVVEQ
HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VAVHLEEFDVPSNLWFEVHAYPSSDGLGIYFRDITERRRFERQIIASLQEKEVLLREIHH
HHHHHHHCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVKNNLQVVTSLLRLQAHQTVDAASIEALQTCRRRVQSMASIHELLYQSGDLASVDFGEY
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VRLIGHQLIRSYRARPGKVRLKMEACSVRLDLAMAIPCGLIVNELISNSLKHAFARDKRN
HHHHHHHHHHHHCCCCCCEEEEEEHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RIGVRLSQSEQTVTLLVEDNGSGLPADFDPAKLESLGLQLVNDLALQLGGSVVFSGAQGT
CCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
SVRVTFPVHR
EEEEEECCCC
>Mature Secondary Structure
MQDENTARERSPMGGAALRRFIERVKGTHLHKRRLRRLACDCEVQLHSAERQIRFFLEST
CCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCC
TDAFVALDRQWRITYANQRVAALNHLPLEQIVGKTHWQMWPWSVGSRVEQEYRRAVDEQS
CCHHEEECCCEEEEECCCHHHHHHCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCC
EAHFEILYEPLQLWLEIHAYPSPDGLAIFFRDITEQKQTQQWLGLLAQASEVFAASLDYR
CHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TTLQNVAQLVVTVMADWCLIDIVENEQIAFTNPIVAAADPELVQLLRDLRHLYPLSRDAD
HHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCEEECCCHHHHHHHHHHHHHCCCCCCCC
YGAPRVFRTGEPILAEVIPESFYASFCVSEQQLDMLQRLDACSYIIVPLVAHGQTLGTLV
CCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE
LASGRTLSGRHYSDRDLKTAEELARRASISVDNARAHRAEQQARSQAETARAKLIDTLDS
EECCCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITDAFVALDPEWRVSYVNRLAAKFSAKTQQALIGKNVWEEWPGLVGTRFETECRRAVVEQ
HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VAVHLEEFDVPSNLWFEVHAYPSSDGLGIYFRDITERRRFERQIIASLQEKEVLLREIHH
HHHHHHHCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVKNNLQVVTSLLRLQAHQTVDAASIEALQTCRRRVQSMASIHELLYQSGDLASVDFGEY
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VRLIGHQLIRSYRARPGKVRLKMEACSVRLDLAMAIPCGLIVNELISNSLKHAFARDKRN
HHHHHHHHHHHHCCCCCCEEEEEEHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RIGVRLSQSEQTVTLLVEDNGSGLPADFDPAKLESLGLQLVNDLALQLGGSVVFSGAQGT
CCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
SVRVTFPVHR
EEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]