| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521296
Identifier: 37521296
GI number: 37521296
Start: 1833160
End: 1833618
Strand: Direct
Name: 37521296
Synonym: glr1727
Alternate gene names: NA
Gene position: 1833160-1833618 (Clockwise)
Preceding gene: 37521295
Following gene: 37521298
Centisome position: 39.35
GC content: 56.43
Gene sequence:
>459_bases GTGTATGTCGATCAGTCCGGCATGGACGAGCGCGACGATTACGGATACGGTTGGTCGCCGTCGGGGGAGCGCTTTTACGG ACTGAAAGCAGGTCGTCGTCAGGGTCGCATCAACATGATTGCGGGCTATCGAGCCGGTCAGCTGATCGCCCCGTTCACTG TCGAAGGGGCTTGCAATCGGACCGTGTTTGAAATTTGGCTGGAGAGCTGCTTGATTCCTGTGTTGCAGCCTGGCGAGTGG GTGATTCTGGATAACGCCACGTTTGATCATGGTGGCCGGATTGTCGCATTGATTGAAGCGGCCGGTGCCCACGTACTCTA TTTACCCCCGTATTCCCCCGACCTGAACCGCATTGAGAAGTGCTGGGCGTGGTTGAAAAGTCGGATTCGCAAACGGTTAC GTGATTGCGGGCATTTGCGCAACGCGATGGATGCCGTTCTCAAACAGGCTGCGTCCTAA
Upstream 100 bases:
>100_bases GCATCACCCGAAAAAAAAGACCTACGGGTATCGCGAACGCGATGAGGCGAAACGCTCAGCATTCCTAGAGCTTCTGCCGG ACCCGAAAGCCGCGCACCTG
Downstream 100 bases:
>100_bases CTTAAATGGCGACAGCTATATCTTTGGATTTCGGTTGCTGGTGCGTGTGGCTAGAACCGGCCTGGGATTTTGCAAAGGCA ATTCCGAAATGCCCTAGCGG
Product: putative transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MYVDQSGMDERDDYGYGWSPSGERFYGLKAGRRQGRINMIAGYRAGQLIAPFTVEGACNRTVFEIWLESCLIPVLQPGEW VILDNATFDHGGRIVALIEAAGAHVLYLPPYSPDLNRIEKCWAWLKSRIRKRLRDCGHLRNAMDAVLKQAAS
Sequences:
>Translated_152_residues MYVDQSGMDERDDYGYGWSPSGERFYGLKAGRRQGRINMIAGYRAGQLIAPFTVEGACNRTVFEIWLESCLIPVLQPGEW VILDNATFDHGGRIVALIEAAGAHVLYLPPYSPDLNRIEKCWAWLKSRIRKRLRDCGHLRNAMDAVLKQAAS >Mature_152_residues MYVDQSGMDERDDYGYGWSPSGERFYGLKAGRRQGRINMIAGYRAGQLIAPFTVEGACNRTVFEIWLESCLIPVLQPGEW VILDNATFDHGGRIVALIEAAGAHVLYLPPYSPDLNRIEKCWAWLKSRIRKRLRDCGHLRNAMDAVLKQAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17160; Mature: 17160
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVDQSGMDERDDYGYGWSPSGERFYGLKAGRRQGRINMIAGYRAGQLIAPFTVEGACNR CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEECCEEECCCCCH TVFEIWLESCLIPVLQPGEWVILDNATFDHGGRIVALIEAAGAHVLYLPPYSPDLNRIEK HHHHHHHHHHHHCCCCCCCEEEEECCEECCCCEEEEEEECCCCEEEEECCCCCCHHHHHH CWAWLKSRIRKRLRDCGHLRNAMDAVLKQAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYVDQSGMDERDDYGYGWSPSGERFYGLKAGRRQGRINMIAGYRAGQLIAPFTVEGACNR CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEECCEEECCCCCH TVFEIWLESCLIPVLQPGEWVILDNATFDHGGRIVALIEAAGAHVLYLPPYSPDLNRIEK HHHHHHHHHHHHCCCCCCCEEEEECCEECCCCEEEEEEECCCCEEEEECCCCCCHHHHHH CWAWLKSRIRKRLRDCGHLRNAMDAVLKQAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA