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The map label for this gene is bphB [H]

Identifier: 37521102

GI number: 37521102

Start: 1653181

End: 1654683

Strand: Reverse

Name: bphB [H]

Synonym: gll1533

Alternate gene names: 37521102

Gene position: 1654683-1653181 (Counterclockwise)

Preceding gene: 37521105

Following gene: 37521100

Centisome position: 35.52

GC content: 64.07

Gene sequence:

>1503_bases
ATGCCGTCCCAATCCACCTTCATGGCCAGTCCAGACCTGCGCATTATTCTCATCGACGACAACCCCGGCGATCGGCTGCT
TGCCCTGCGGGAGCTGACCCAGGAGTTTCCCAACCTGCAAGCCGAGCAAATCACCGACCAGGCGGCCTTCGAAGGGGCTC
TGGCGACCCAGCGCTTCGATGTGGTGATTACCGACTACCAGCTGCACTGGGGAGACGGACTGCAGGTGCTGCGGCGGGTC
AAGCGGCGCTTTCCGGACTGCCCGGTGATCATGTTCACCAACAGCAGCAACGGTGAACTGGCTGCCCAGGCGATGAAGGA
TGGGCTGGACGACTACGTGACCAAGTCTCCCCGGCAGTACATCCGGCTGGCGGGAGCGGTACGCTCGGCGCTTGCCTTCA
CCCGGGCCAACCGGCGCGTCGAGCGGTTGCAGTCGCGCCTGCAGACGCTGCTCAACCGGCTGCACGTCGGCGTGTTTCGG
GCGAGTGTGGGCGGCCGGCTCATCGAGTGCAACATCGCCTTTTTGCAGTTGCTGGGCTTCACTTCGAGCGGACAAATCCA
GCAGTTGCCCTTCGAGCAGCTGTACTGCCCACCGCCGGACGGTGCCCCGGAGGGCTACTGGGAGAACGAGATTTTGCTGC
AGCGGCCGGACGGCAGCGAACTGTGGGTGCTGTTGAGCGCCACGCTCAGCGCTGGGGAGGACGGCGGCATCATCGACGGA
CTGATCGAGGATATCAGCGCTCGCAAGCAAAACAGCGAACAACTGGAAAGGCGGGTGCGCGAACGCACCGTGCAGTTGGA
GGCGGCCAACCAGGAGTTGGAGGCATTTACCTACTCGGTCTCCCACGACCTGCGCGAGCCCCTGCGCAACATGCAGGGAT
TGGCCCAGGCGCTGCTTGAAGATTTTTCCGCCCAATTGCCCCCCACCGCCCACCAGTACGCTCAACTGATCGTCCGCTCC
AGCCAGCAAATGGACACGCTTATCCAGGATCTGCTCACCTACAGCCGCCTGGGACGAGCCGACACCCACCCGCAACCGGT
CAATCTCAACACGGTGATTTCCGCCGTGCTCACCCAGCTGCAGACCAAACTACAGGAAGTCGGAGCCGAGGTGCAGGTGG
CTAGTCCGCTTCCCGAGGTGCACGGCCACTTCAATACCCTGGTTCAGGTCCTGCTCAACTTGCTGACCAATGCGATCAAG
TTCGTCGCCCCGGGGGTCACTCCCCGCGTGCGCATCCGTGCCGACGTACACGACCGGGAAGGCTCCCGCTGGGTGCGGCT
GTGGGTGGAGGACAACGGCATCGGTGTGTCCCCCGAGAACCATCAGCGCATCTTTCGCGTCTTCGAACGGCTGCACGGCA
GTGAGACCTATCCCGGTACCGGCATCGGCCTGGCCATCGTACGCAAGGGCATCGAACAGCACGGGGGCCGGGCGGGCGTC
GAGGCGGATCTGGGGCAGGGCAGCCGCTTCTGGGTAGATCTGCCGCCGGTCGCAGACGGGTGA

Upstream 100 bases:

>100_bases
GCTTCTAGAAGTTTTTGATAGCAGCCCCAATGCCTGGGAAAATGAAAAACACTCCTTTGCGCAGAGTCGCTCCTCACCAA
ATTTCAAGCAAAGTTAAGCT

Downstream 100 bases:

>100_bases
AGCCCGCAATCCCAACGAGCGCCCAGGCTCAGGCCGTCTGGAAGGAACTAAGCACTTCTACCAGGGTTTCGGTCGCCAGG
GGTTTGAGCAAATAGAAGTA

Product: two-component hybrid sensor and regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MPSQSTFMASPDLRIILIDDNPGDRLLALRELTQEFPNLQAEQITDQAAFEGALATQRFDVVITDYQLHWGDGLQVLRRV
KRRFPDCPVIMFTNSSNGELAAQAMKDGLDDYVTKSPRQYIRLAGAVRSALAFTRANRRVERLQSRLQTLLNRLHVGVFR
ASVGGRLIECNIAFLQLLGFTSSGQIQQLPFEQLYCPPPDGAPEGYWENEILLQRPDGSELWVLLSATLSAGEDGGIIDG
LIEDISARKQNSEQLERRVRERTVQLEAANQELEAFTYSVSHDLREPLRNMQGLAQALLEDFSAQLPPTAHQYAQLIVRS
SQQMDTLIQDLLTYSRLGRADTHPQPVNLNTVISAVLTQLQTKLQEVGAEVQVASPLPEVHGHFNTLVQVLLNLLTNAIK
FVAPGVTPRVRIRADVHDREGSRWVRLWVEDNGIGVSPENHQRIFRVFERLHGSETYPGTGIGLAIVRKGIEQHGGRAGV
EADLGQGSRFWVDLPPVADG

Sequences:

>Translated_500_residues
MPSQSTFMASPDLRIILIDDNPGDRLLALRELTQEFPNLQAEQITDQAAFEGALATQRFDVVITDYQLHWGDGLQVLRRV
KRRFPDCPVIMFTNSSNGELAAQAMKDGLDDYVTKSPRQYIRLAGAVRSALAFTRANRRVERLQSRLQTLLNRLHVGVFR
ASVGGRLIECNIAFLQLLGFTSSGQIQQLPFEQLYCPPPDGAPEGYWENEILLQRPDGSELWVLLSATLSAGEDGGIIDG
LIEDISARKQNSEQLERRVRERTVQLEAANQELEAFTYSVSHDLREPLRNMQGLAQALLEDFSAQLPPTAHQYAQLIVRS
SQQMDTLIQDLLTYSRLGRADTHPQPVNLNTVISAVLTQLQTKLQEVGAEVQVASPLPEVHGHFNTLVQVLLNLLTNAIK
FVAPGVTPRVRIRADVHDREGSRWVRLWVEDNGIGVSPENHQRIFRVFERLHGSETYPGTGIGLAIVRKGIEQHGGRAGV
EADLGQGSRFWVDLPPVADG
>Mature_499_residues
PSQSTFMASPDLRIILIDDNPGDRLLALRELTQEFPNLQAEQITDQAAFEGALATQRFDVVITDYQLHWGDGLQVLRRVK
RRFPDCPVIMFTNSSNGELAAQAMKDGLDDYVTKSPRQYIRLAGAVRSALAFTRANRRVERLQSRLQTLLNRLHVGVFRA
SVGGRLIECNIAFLQLLGFTSSGQIQQLPFEQLYCPPPDGAPEGYWENEILLQRPDGSELWVLLSATLSAGEDGGIIDGL
IEDISARKQNSEQLERRVRERTVQLEAANQELEAFTYSVSHDLREPLRNMQGLAQALLEDFSAQLPPTAHQYAQLIVRSS
QQMDTLIQDLLTYSRLGRADTHPQPVNLNTVISAVLTQLQTKLQEVGAEVQVASPLPEVHGHFNTLVQVLLNLLTNAIKF
VAPGVTPRVRIRADVHDREGSRWVRLWVEDNGIGVSPENHQRIFRVFERLHGSETYPGTGIGLAIVRKGIEQHGGRAGVE
ADLGQGSRFWVDLPPVADG

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=384, Percent_Identity=26.8229166666667, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789149, Length=276, Percent_Identity=28.6231884057971, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=32.1266968325792, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786600, Length=239, Percent_Identity=31.3807531380753, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1786912, Length=246, Percent_Identity=31.3008130081301, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788549, Length=322, Percent_Identity=27.9503105590062, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87081816, Length=286, Percent_Identity=26.5734265734266, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790346, Length=222, Percent_Identity=30.6306306306306, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI145693157, Length=261, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786783, Length=276, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790300, Length=301, Percent_Identity=27.2425249169435, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787894, Length=225, Percent_Identity=29.3333333333333, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788393, Length=233, Percent_Identity=27.8969957081545, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789808, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788713, Length=278, Percent_Identity=23.021582733813, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790567, Length=219, Percent_Identity=27.8538812785388, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082128, Length=245, Percent_Identity=26.9387755102041, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 55736; Mature: 55605

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSQSTFMASPDLRIILIDDNPGDRLLALRELTQEFPNLQAEQITDQAAFEGALATQRFD
CCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEE
VVITDYQLHWGDGLQVLRRVKRRFPDCPVIMFTNSSNGELAAQAMKDGLDDYVTKSPRQY
EEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHCCHHHH
IRLAGAVRSALAFTRANRRVERLQSRLQTLLNRLHVGVFRASVGGRLIECNIAFLQLLGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCC
TSSGQIQQLPFEQLYCPPPDGAPEGYWENEILLQRPDGSELWVLLSATLSAGEDGGIIDG
CCCCCEECCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEHHHCCCCCCCHHHH
LIEDISARKQNSEQLERRVRERTVQLEAANQELEAFTYSVSHDLREPLRNMQGLAQALLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFSAQLPPTAHQYAQLIVRSSQQMDTLIQDLLTYSRLGRADTHPQPVNLNTVISAVLTQL
HHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
QTKLQEVGAEVQVASPLPEVHGHFNTLVQVLLNLLTNAIKFVAPGVTPRVRIRADVHDRE
HHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GSRWVRLWVEDNGIGVSPENHQRIFRVFERLHGSETYPGTGIGLAIVRKGIEQHGGRAGV
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
EADLGQGSRFWVDLPPVADG
CCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
PSQSTFMASPDLRIILIDDNPGDRLLALRELTQEFPNLQAEQITDQAAFEGALATQRFD
CCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEE
VVITDYQLHWGDGLQVLRRVKRRFPDCPVIMFTNSSNGELAAQAMKDGLDDYVTKSPRQY
EEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHCCHHHH
IRLAGAVRSALAFTRANRRVERLQSRLQTLLNRLHVGVFRASVGGRLIECNIAFLQLLGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCC
TSSGQIQQLPFEQLYCPPPDGAPEGYWENEILLQRPDGSELWVLLSATLSAGEDGGIIDG
CCCCCEECCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEHHHCCCCCCCHHHH
LIEDISARKQNSEQLERRVRERTVQLEAANQELEAFTYSVSHDLREPLRNMQGLAQALLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFSAQLPPTAHQYAQLIVRSSQQMDTLIQDLLTYSRLGRADTHPQPVNLNTVISAVLTQL
HHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
QTKLQEVGAEVQVASPLPEVHGHFNTLVQVLLNLLTNAIKFVAPGVTPRVRIRADVHDRE
HHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GSRWVRLWVEDNGIGVSPENHQRIFRVFERLHGSETYPGTGIGLAIVRKGIEQHGGRAGV
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
EADLGQGSRFWVDLPPVADG
CCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]