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The map label for this gene is cpeS2 [H]

Identifier: 37521100

GI number: 37521100

Start: 1651931

End: 1652455

Strand: Reverse

Name: cpeS2 [H]

Synonym: gll1531

Alternate gene names: 37521100

Gene position: 1652455-1651931 (Counterclockwise)

Preceding gene: 37521102

Following gene: 37521097

Centisome position: 35.47

GC content: 59.62

Gene sequence:

>525_bases
GTGCAAACTCTCACTCAATCTTCCGAATCGCTGATTTCGCGCCTGTTCCAGCGCTCCGAGGGGCACTGGCGCTCCGAGCG
GCGCTACTACACGCTGCCCGAAGGCCGCACCCAGGAGATGGAGAGCTTGCTCGAGATTGCCTACTTGCCCTCGGGCAGTG
CAGAACTCATCGAACTGGCTGGGTTGCACAGCCTGTCGACAGAAATGCCTCTGGTCTGCGGAGCCAAAATTCACTGGCGC
AGCAGTGCAAAGCTGACCGGCCGCGAGCAGTCCGAAGGGATTACCCTATTTGGGGCACTTGGGGATACGCTCTATCGCGA
CCGGGGTTTTGCCACCAGCAAGCCGGTCACCGCCCTTTACCGCTTTACCGATCCAGACACGCTGCACCTGCGCACCGAGT
ACAACGGTTCGGTGTTCGAAGAAGAACTCAAACTGGTCGGCGAGCGCTATCGCACGCGCCAGACGATCATCTCGCGCCTC
GGCGAGCAGCAGATGATTGGCCAGTATCTAGAGAAGCGCATCTAA

Upstream 100 bases:

>100_bases
CTACTGCACAGAGAATGCCAGCAAAGCGGTGCTAGGATAAAGAAAATTTACATTGACCGGTTCAGTCTCTGCCCCGGTCG
TCTCGACAGGACACAGACCG

Downstream 100 bases:

>100_bases
TTTGGATTCCAGGCGGCGAGCACATCTCTGCCGCCTGGAATGCGCTCAAACGCGCAGAGCAAGCATGTTTTCGACAGCCT
GGACGATATCCTGCGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQTLTQSSESLISRLFQRSEGHWRSERRYYTLPEGRTQEMESLLEIAYLPSGSAELIELAGLHSLSTEMPLVCGAKIHWR
SSAKLTGREQSEGITLFGALGDTLYRDRGFATSKPVTALYRFTDPDTLHLRTEYNGSVFEEELKLVGERYRTRQTIISRL
GEQQMIGQYLEKRI

Sequences:

>Translated_174_residues
MQTLTQSSESLISRLFQRSEGHWRSERRYYTLPEGRTQEMESLLEIAYLPSGSAELIELAGLHSLSTEMPLVCGAKIHWR
SSAKLTGREQSEGITLFGALGDTLYRDRGFATSKPVTALYRFTDPDTLHLRTEYNGSVFEEELKLVGERYRTRQTIISRL
GEQQMIGQYLEKRI
>Mature_174_residues
MQTLTQSSESLISRLFQRSEGHWRSERRYYTLPEGRTQEMESLLEIAYLPSGSAELIELAGLHSLSTEMPLVCGAKIHWR
SSAKLTGREQSEGITLFGALGDTLYRDRGFATSKPVTALYRFTDPDTLHLRTEYNGSVFEEELKLVGERYRTRQTIISRL
GEQQMIGQYLEKRI

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (Potential). In vitro does not act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 19953; Mature: 19953

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLTQSSESLISRLFQRSEGHWRSERRYYTLPEGRTQEMESLLEIAYLPSGSAELIELA
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHH
GLHSLSTEMPLVCGAKIHWRSSAKLTGREQSEGITLFGALGDTLYRDRGFATSKPVTALY
CCHHCCCCCCEEECCEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCEEEE
RFTDPDTLHLRTEYNGSVFEEELKLVGERYRTRQTIISRLGEQQMIGQYLEKRI
EECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MQTLTQSSESLISRLFQRSEGHWRSERRYYTLPEGRTQEMESLLEIAYLPSGSAELIELA
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHH
GLHSLSTEMPLVCGAKIHWRSSAKLTGREQSEGITLFGALGDTLYRDRGFATSKPVTALY
CCHHCCCCCCEEECCEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCEEEE
RFTDPDTLHLRTEYNGSVFEEELKLVGERYRTRQTIISRLGEQQMIGQYLEKRI
EECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]