| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is psbP
Identifier: 37521009
GI number: 37521009
Start: 1543282
End: 1543869
Strand: Reverse
Name: psbP
Synonym: gvip201
Alternate gene names: NA
Gene position: 1543869-1543282 (Counterclockwise)
Preceding gene: 37521011
Following gene: 37521007
Centisome position: 33.14
GC content: 63.1
Gene sequence:
>588_bases GTGGGCAAAAGCATGATCCGCATCGGTCGCAAGCAGTTGGTCCAAGCCGGTGTCGCCGCCGTGCTCAGCGCAGCACTCGT CGGCTGCAGCCGCTCGGGTATCGACGCGCCCAAAGGATTTCAGCGTTTTTCTGAGCCCAATTCCACCTTTACGCTGGTCT ACCCCGATACCTGGACCTTCAATCCGGATCCGAAGGGGGCGGTGCGGCTGTCGGACCCGGCGGATGCCACCTATCAGGTG TCGGTGGTGGTGAGCGACGCCCCGCGCAAGGACATCAAAGATATCCGCGCCTTCGGCACCCCCCAGCAGGTGGCCGACCG CTTTGCCAACGACGTGCTCAAGAAAAAATCGCCCCCCGGCGCGGTGATCGAAGTCTCCAACGCCGCCCAGCGCACCGACA GCAAAGGGGTGCCCTACTACTCCTTCGAGGTGGTGATCGCCTCGGGGGGCCGGGCTGTCCACCAGGTCTACTGCGTGGCA GTGAGCGGCGGCAAAGTCTTCACCCTGGTCACCGGCTCCGCCGCCATTGCCTGGGGCGAGCGGCGCGAAAAAATTTACCA GATCGTCAACTCCTTTACGATCAGTTGA
Upstream 100 bases:
>100_bases CAGGTAGGCACCTCCTGCCGACGCCCTCCACTGTAGCCTCCTGGGGCGCTCTGCACGGCGTTCTGGTACGCTCGATTGCT GATAGATTGGGAAGGGTCCA
Downstream 100 bases:
>100_bases GGGCCGGATAAGCCCTGTGATAGCTTAGGTAGGCTCTGGAGAGGTGACAGAGCGGTTGATTGTGACGGTCTCGAAAACCG TTGAGGCGAAAGCCTCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MGKSMIRIGRKQLVQAGVAAVLSAALVGCSRSGIDAPKGFQRFSEPNSTFTLVYPDTWTFNPDPKGAVRLSDPADATYQV SVVVSDAPRKDIKDIRAFGTPQQVADRFANDVLKKKSPPGAVIEVSNAAQRTDSKGVPYYSFEVVIASGGRAVHQVYCVA VSGGKVFTLVTGSAAIAWGERREKIYQIVNSFTIS
Sequences:
>Translated_195_residues MGKSMIRIGRKQLVQAGVAAVLSAALVGCSRSGIDAPKGFQRFSEPNSTFTLVYPDTWTFNPDPKGAVRLSDPADATYQV SVVVSDAPRKDIKDIRAFGTPQQVADRFANDVLKKKSPPGAVIEVSNAAQRTDSKGVPYYSFEVVIASGGRAVHQVYCVA VSGGKVFTLVTGSAAIAWGERREKIYQIVNSFTIS >Mature_194_residues GKSMIRIGRKQLVQAGVAAVLSAALVGCSRSGIDAPKGFQRFSEPNSTFTLVYPDTWTFNPDPKGAVRLSDPADATYQVS VVVSDAPRKDIKDIRAFGTPQQVADRFANDVLKKKSPPGAVIEVSNAAQRTDSKGVPYYSFEVVIASGGRAVHQVYCVAV SGGKVFTLVTGSAAIAWGERREKIYQIVNSFTIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20887; Mature: 20756
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSMIRIGRKQLVQAGVAAVLSAALVGCSRSGIDAPKGFQRFSEPNSTFTLVYPDTWTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC NPDPKGAVRLSDPADATYQVSVVVSDAPRKDIKDIRAFGTPQQVADRFANDVLKKKSPPG CCCCCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC AVIEVSNAAQRTDSKGVPYYSFEVVIASGGRAVHQVYCVAVSGGKVFTLVTGSAAIAWGE CEEEECCHHHCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEECCEEEEHHH RREKIYQIVNSFTIS HHHHHHHHHHHHCCC >Mature Secondary Structure GKSMIRIGRKQLVQAGVAAVLSAALVGCSRSGIDAPKGFQRFSEPNSTFTLVYPDTWTF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC NPDPKGAVRLSDPADATYQVSVVVSDAPRKDIKDIRAFGTPQQVADRFANDVLKKKSPPG CCCCCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC AVIEVSNAAQRTDSKGVPYYSFEVVIASGGRAVHQVYCVAVSGGKVFTLVTGSAAIAWGE CEEEECCHHHCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEECCEEEEHHH RREKIYQIVNSFTIS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA