| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is frpA [H]
Identifier: 37520913
GI number: 37520913
Start: 1436903
End: 1439641
Strand: Reverse
Name: frpA [H]
Synonym: gll1344
Alternate gene names: 37520913
Gene position: 1439641-1436903 (Counterclockwise)
Preceding gene: 37520917
Following gene: 37520910
Centisome position: 30.9
GC content: 57.72
Gene sequence:
>2739_bases GTGGAGTACAGATCCGTGCAGTCTAGGTTCTTTATCACTCTTAAAGCTGTACTGCTTCTATTGTTTATCGGGTGTTCGGC CGTCTTTGCCCAACCCTTCGATCCACAAAAGCCAAGAAATCCCTACCAAAGACCCGAGCCTATCAACGGCAAGAAGCCTC CAAGTATACTGCTTGCACCGACCGGTGGATACTATGAGTGTTACGACGTGCCTACAGACTACCAGGAGGCGGTACCGACT TCTGATGACATGATGGAATGCCCTCCAGGCAAATTTCCCCAGAAGCTAATCTACGAGCGCCCGTTCAAGGCACCCTTGAT TCCACTGAAGAAACAGAATTCGGAACAAAACAAAAAGGAAGAGGAAGTTCCCCGGCCAGAACCGTCCCAAAATTCCGATG CCACGACGAACGCACCTGTTTATAACCCTGGTGATAAACTATATCGCTATTACGCAGCAGCAACCAGCCCGAATAATGTC CCTAACAGTGGTGTACAGGCTAACATCACAGTTGGAAAAGCAAACTTTGATATAGTCAAAAAAGACGCCTCCCTTACACA ACTCGCAACGCTTTCATCGGATGGTGGTAACGTAGTTGAAATTGGTTGGCAGGTCGATGAAGAAGTATACTTGGACAAGC AAATCTATCTCTACGCAGCGCGTTACGTAAAAGGGGCATTTCTTCCTGCTATTAACACCAGCTCTGGCTATAAGCCAATT TCGGGGGCACCGGTGACCATTGCGCAAGAGCTCACAGGTGGGGGAAATGCTTCTTTTGCGATTGCTCACAAAGCCGCTTC AGGGAGCTTGCCTGCTCGATGGGCACTTTCTTACAATGGTACAGAGTTTGGTTATTTCCCCGATACTGTGTGGTCTGGAA GCTTTACTCAAGGTGCGATAGTAGGTGCTCAGGGCGAAGTCATTTCACCGAGAGGTAAAGGCACCTGCACGGATATGGGC AATGGTGTACTTGGTAATTCCACTTCGGCCACACCAGCCAAGTTTACAAACTTGGCTTACCTGAAGACTGGTAGTGGTAC TGCAGCGTATCCTCCCGACATTTTTGAACCACCCAGCGTGTCAAGTCAGTACACCTTCGGTGGCCAGTCGAGCGGTTCGC TGTCCCAGTTCGGTTTTGGCGGACCGGGAATTGGCAAGTGCGCTAAGCCGGCACAAAAGCCCCTCAGCTTCGACAATACC TGCAACGCCGACTTGCTTGCCTACTTGAACGGCAGCCAACGCGTCACCTACAACGCCTCCGGCTCTCAAACCACCCTCTC CAATTTCGGTATCACCGGCGACATCGCCATGCCCGGCAATTACCTCGGCTCCGGCTTCGCCAACCTCACTGTCTTTCGCC CCTCCACCGGGCAGTGGTATGCCAACCCCACCAACACCGGCACCACCGCCCCACTGCTGGCCTCAGGCCTCGGCTACATC GGCGATGTGCCCCTGGCGGGTGACTTCAACGGCGACGGACTCACCGACGCCGCTTACTGGCGCAGGTACGACAACCACTG GCTCTACTACTCCAAACCCGATAATGCCATCGTTGATCTGGGGGCTTACGGCGACGATTCCCCCCAAGACGTGTTCATCG TCGGCGACGCCAACGCCGACGGCCTCGCCGACCGGATTGTCTACCGCTACAGCAACGCCACCTGGTACTTCGCCTATACC GGCAGCGGCACCAACAACCTGGTGGCCGCCTTCCCCGGAGTGGACGGCTACTGGCTACCGCAGGCCTATGACTTCAACGG CGATGGTGCGGTGGACGAGGGGATGTACGACACCCTCACCGGCCACTGGCTGGTGCGCGACCACTACAACCGCCAGATCT ACGACTACGGCTACTACGGCGGCCCGGTGTTCACCCCCGTTGTGGACGATTTCAACTGCGACGGGCGGGTGGACCTGGGG GTGTACAACAACGGCACCACCGACTTCGCCCACTGGTTCATTCTGATGACCAACAACGGCCAGCAGTTTGACCAGGGTTA CCTATTCCGGGAGCAACGGACCCAACTGACCTACCAGTTCTACCCACCCAGCTACGTGCAACCCACCACCCCCATCCTTA TCGACATTGCTGGCGACGGCTTTGATCTGAGCGACGAGTTCGGCGGGGTGGACTTCGACATCACCGCCACGGGAGTGCCG ATGCACCTGGCATGGACTAAAGCGGACACCGACGATGCCTGGTTGGTGCTCGACCGCGACGGCAATGGCCGTATCGACAA CGGCAAGGAACTGTTCGGCAACTTCACGCCCCAACCAAGAACGGGCGAACCGAACGGGTTTTTGGCCCTGGCGAAGTTCG ACAAGCCGGGTGACGGCGGTAACGGCGACGGGCGCATCGATGCAAAAGACGCGGTGTTCGCACAATTGCGGCTGTGGCAA GACACCAATCACGACGGCGTCTCGGCTCCCGGCGAACTGCGTACCCTCCGGGCAATGGGAGTGGCGGGGCTGGGGTTGAA CTACGCCGAGTCGCGGCGGACGGACGCGTACGGCAACCAGTTCCGGTACCGGGGTTTGGTGCAGAGCGTGCCGGGTGCGC CGGTGGGCCGGGTGGCGTATGACGTGCTGCTGCGATTCGAGACGAAGGAGACGGCGGGATTGCGGGCGGCGGGTCCGCAG GCGGCGGCGCAGGTGGAGCCGCGGTTCGAGTTGCCGCCGGGGGGCTTTCCGATCACCGAAGCGGCAATCGTGCATGACCT GGCGACTTTGCGGCGCTAG
Upstream 100 bases:
>100_bases ACTCTTTGGGCTCCGCAATGTACATGCTTGAAGGCGCTGCTTTCCTTTCGGTGGCGTCGCGTCGCGTTGCAGTGCTGAAG TTTGTTGTTGTTCAACCTCA
Downstream 100 bases:
>100_bases GCGACAAACAGTCCACTCACAGCACACTCGATGGTCCCCGGCTTCCTCCAAGCCGGGGGCTTTTTGCATCGTGGGGCGTG GTCCCGGCGAGACAGGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 912; Mature: 912
Protein sequence:
>912_residues MEYRSVQSRFFITLKAVLLLLFIGCSAVFAQPFDPQKPRNPYQRPEPINGKKPPSILLAPTGGYYECYDVPTDYQEAVPT SDDMMECPPGKFPQKLIYERPFKAPLIPLKKQNSEQNKKEEEVPRPEPSQNSDATTNAPVYNPGDKLYRYYAAATSPNNV PNSGVQANITVGKANFDIVKKDASLTQLATLSSDGGNVVEIGWQVDEEVYLDKQIYLYAARYVKGAFLPAINTSSGYKPI SGAPVTIAQELTGGGNASFAIAHKAASGSLPARWALSYNGTEFGYFPDTVWSGSFTQGAIVGAQGEVISPRGKGTCTDMG NGVLGNSTSATPAKFTNLAYLKTGSGTAAYPPDIFEPPSVSSQYTFGGQSSGSLSQFGFGGPGIGKCAKPAQKPLSFDNT CNADLLAYLNGSQRVTYNASGSQTTLSNFGITGDIAMPGNYLGSGFANLTVFRPSTGQWYANPTNTGTTAPLLASGLGYI GDVPLAGDFNGDGLTDAAYWRRYDNHWLYYSKPDNAIVDLGAYGDDSPQDVFIVGDANADGLADRIVYRYSNATWYFAYT GSGTNNLVAAFPGVDGYWLPQAYDFNGDGAVDEGMYDTLTGHWLVRDHYNRQIYDYGYYGGPVFTPVVDDFNCDGRVDLG VYNNGTTDFAHWFILMTNNGQQFDQGYLFREQRTQLTYQFYPPSYVQPTTPILIDIAGDGFDLSDEFGGVDFDITATGVP MHLAWTKADTDDAWLVLDRDGNGRIDNGKELFGNFTPQPRTGEPNGFLALAKFDKPGDGGNGDGRIDAKDAVFAQLRLWQ DTNHDGVSAPGELRTLRAMGVAGLGLNYAESRRTDAYGNQFRYRGLVQSVPGAPVGRVAYDVLLRFETKETAGLRAAGPQ AAAQVEPRFELPPGGFPITEAAIVHDLATLRR
Sequences:
>Translated_912_residues MEYRSVQSRFFITLKAVLLLLFIGCSAVFAQPFDPQKPRNPYQRPEPINGKKPPSILLAPTGGYYECYDVPTDYQEAVPT SDDMMECPPGKFPQKLIYERPFKAPLIPLKKQNSEQNKKEEEVPRPEPSQNSDATTNAPVYNPGDKLYRYYAAATSPNNV PNSGVQANITVGKANFDIVKKDASLTQLATLSSDGGNVVEIGWQVDEEVYLDKQIYLYAARYVKGAFLPAINTSSGYKPI SGAPVTIAQELTGGGNASFAIAHKAASGSLPARWALSYNGTEFGYFPDTVWSGSFTQGAIVGAQGEVISPRGKGTCTDMG NGVLGNSTSATPAKFTNLAYLKTGSGTAAYPPDIFEPPSVSSQYTFGGQSSGSLSQFGFGGPGIGKCAKPAQKPLSFDNT CNADLLAYLNGSQRVTYNASGSQTTLSNFGITGDIAMPGNYLGSGFANLTVFRPSTGQWYANPTNTGTTAPLLASGLGYI GDVPLAGDFNGDGLTDAAYWRRYDNHWLYYSKPDNAIVDLGAYGDDSPQDVFIVGDANADGLADRIVYRYSNATWYFAYT GSGTNNLVAAFPGVDGYWLPQAYDFNGDGAVDEGMYDTLTGHWLVRDHYNRQIYDYGYYGGPVFTPVVDDFNCDGRVDLG VYNNGTTDFAHWFILMTNNGQQFDQGYLFREQRTQLTYQFYPPSYVQPTTPILIDIAGDGFDLSDEFGGVDFDITATGVP MHLAWTKADTDDAWLVLDRDGNGRIDNGKELFGNFTPQPRTGEPNGFLALAKFDKPGDGGNGDGRIDAKDAVFAQLRLWQ DTNHDGVSAPGELRTLRAMGVAGLGLNYAESRRTDAYGNQFRYRGLVQSVPGAPVGRVAYDVLLRFETKETAGLRAAGPQ AAAQVEPRFELPPGGFPITEAAIVHDLATLRR >Mature_912_residues MEYRSVQSRFFITLKAVLLLLFIGCSAVFAQPFDPQKPRNPYQRPEPINGKKPPSILLAPTGGYYECYDVPTDYQEAVPT SDDMMECPPGKFPQKLIYERPFKAPLIPLKKQNSEQNKKEEEVPRPEPSQNSDATTNAPVYNPGDKLYRYYAAATSPNNV PNSGVQANITVGKANFDIVKKDASLTQLATLSSDGGNVVEIGWQVDEEVYLDKQIYLYAARYVKGAFLPAINTSSGYKPI SGAPVTIAQELTGGGNASFAIAHKAASGSLPARWALSYNGTEFGYFPDTVWSGSFTQGAIVGAQGEVISPRGKGTCTDMG NGVLGNSTSATPAKFTNLAYLKTGSGTAAYPPDIFEPPSVSSQYTFGGQSSGSLSQFGFGGPGIGKCAKPAQKPLSFDNT CNADLLAYLNGSQRVTYNASGSQTTLSNFGITGDIAMPGNYLGSGFANLTVFRPSTGQWYANPTNTGTTAPLLASGLGYI GDVPLAGDFNGDGLTDAAYWRRYDNHWLYYSKPDNAIVDLGAYGDDSPQDVFIVGDANADGLADRIVYRYSNATWYFAYT GSGTNNLVAAFPGVDGYWLPQAYDFNGDGAVDEGMYDTLTGHWLVRDHYNRQIYDYGYYGGPVFTPVVDDFNCDGRVDLG VYNNGTTDFAHWFILMTNNGQQFDQGYLFREQRTQLTYQFYPPSYVQPTTPILIDIAGDGFDLSDEFGGVDFDITATGVP MHLAWTKADTDDAWLVLDRDGNGRIDNGKELFGNFTPQPRTGEPNGFLALAKFDKPGDGGNGDGRIDAKDAVFAQLRLWQ DTNHDGVSAPGELRTLRAMGVAGLGLNYAESRRTDAYGNQFRYRGLVQSVPGAPVGRVAYDVLLRFETKETAGLRAAGPQ AAAQVEPRFELPPGGFPITEAAIVHDLATLRR
Specific function: May participate in the pathogenesis of meningococcal disease [H]
COG id: COG2931
COG function: function code Q; RTX toxins and related Ca2+-binding proteins
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein. Secreted (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 12 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010566 - InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR003995 - InterPro: IPR011049 [H]
Pfam domain/function: PF06594 HCBP_related; PF00353 HemolysinCabind [H]
EC number: NA
Molecular weight: Translated: 98749; Mature: 98749
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRSVQSRFFITLKAVLLLLFIGCSAVFAQPFDPQKPRNPYQRPEPINGKKPPSILLAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC TGGYYECYDVPTDYQEAVPTSDDMMECPPGKFPQKLIYERPFKAPLIPLKKQNSEQNKKE CCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHCCHH EEVPRPEPSQNSDATTNAPVYNPGDKLYRYYAAATSPNNVPNSGVQANITVGKANFDIVK HHCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEE KDASLTQLATLSSDGGNVVEIGWQVDEEVYLDKQIYLYAARYVKGAFLPAINTSSGYKPI CCCCEEEEEEECCCCCCEEEEEEEECCEEEECCEEEEEEEHHHCCEEEEEECCCCCCCCC SGAPVTIAQELTGGGNASFAIAHKAASGSLPARWALSYNGTEFGYFPDTVWSGSFTQGAI CCCCEEEEHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE VGAQGEVISPRGKGTCTDMGNGVLGNSTSATPAKFTNLAYLKTGSGTAAYPPDIFEPPSV ECCCCCEECCCCCCCCCCCCCCEECCCCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCCC SSQYTFGGQSSGSLSQFGFGGPGIGKCAKPAQKPLSFDNTCNADLLAYLNGSQRVTYNAS CCEEEECCCCCCCHHHCCCCCCCCCHHCCCHHCCCCCCCCCCCEEEEEECCCCEEEEECC GSQTTLSNFGITGDIAMPGNYLGSGFANLTVFRPSTGQWYANPTNTGTTAPLLASGLGYI CCCEEHHHCCEEEEEECCCCHHCCCCCEEEEECCCCCCEEECCCCCCCCHHHHHHCCCCC GDVPLAGDFNGDGLTDAAYWRRYDNHWLYYSKPDNAIVDLGAYGDDSPQDVFIVGDANAD CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCC GLADRIVYRYSNATWYFAYTGSGTNNLVAAFPGVDGYWLPQAYDFNGDGAVDEGMYDTLT CCHHEEEEEECCCEEEEEEECCCCCCEEEECCCCCCEECCEEECCCCCCCCCCCCHHHCC GHWLVRDHYNRQIYDYGYYGGPVFTPVVDDFNCDGRVDLGVYNNGTTDFAHWFILMTNNG CEEEEEECCCCEEEECCCCCCCEEECEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCC QQFDQGYLFREQRTQLTYQFYPPSYVQPTTPILIDIAGDGFDLSDEFGGVDFDITATGVP CCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHCCEEEEEEECCCE MHLAWTKADTDDAWLVLDRDGNGRIDNGKELFGNFTPQPRTGEPNGFLALAKFDKPGDGG EEEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC NGDGRIDAKDAVFAQLRLWQDTNHDGVSAPGELRTLRAMGVAGLGLNYAESRRTDAYGNQ CCCCEECCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC FRYRGLVQSVPGAPVGRVAYDVLLRFETKETAGLRAAGPQAAAQVEPRFELPPGGFPITE EEECHHHHHCCCCCHHHHEEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHH AAIVHDLATLRR HHHHHHHHHHCC >Mature Secondary Structure MEYRSVQSRFFITLKAVLLLLFIGCSAVFAQPFDPQKPRNPYQRPEPINGKKPPSILLAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC TGGYYECYDVPTDYQEAVPTSDDMMECPPGKFPQKLIYERPFKAPLIPLKKQNSEQNKKE CCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHCCHH EEVPRPEPSQNSDATTNAPVYNPGDKLYRYYAAATSPNNVPNSGVQANITVGKANFDIVK HHCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEE KDASLTQLATLSSDGGNVVEIGWQVDEEVYLDKQIYLYAARYVKGAFLPAINTSSGYKPI CCCCEEEEEEECCCCCCEEEEEEEECCEEEECCEEEEEEEHHHCCEEEEEECCCCCCCCC SGAPVTIAQELTGGGNASFAIAHKAASGSLPARWALSYNGTEFGYFPDTVWSGSFTQGAI CCCCEEEEHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE VGAQGEVISPRGKGTCTDMGNGVLGNSTSATPAKFTNLAYLKTGSGTAAYPPDIFEPPSV ECCCCCEECCCCCCCCCCCCCCEECCCCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCCC SSQYTFGGQSSGSLSQFGFGGPGIGKCAKPAQKPLSFDNTCNADLLAYLNGSQRVTYNAS CCEEEECCCCCCCHHHCCCCCCCCCHHCCCHHCCCCCCCCCCCEEEEEECCCCEEEEECC GSQTTLSNFGITGDIAMPGNYLGSGFANLTVFRPSTGQWYANPTNTGTTAPLLASGLGYI CCCEEHHHCCEEEEEECCCCHHCCCCCEEEEECCCCCCEEECCCCCCCCHHHHHHCCCCC GDVPLAGDFNGDGLTDAAYWRRYDNHWLYYSKPDNAIVDLGAYGDDSPQDVFIVGDANAD CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCC GLADRIVYRYSNATWYFAYTGSGTNNLVAAFPGVDGYWLPQAYDFNGDGAVDEGMYDTLT CCHHEEEEEECCCEEEEEEECCCCCCEEEECCCCCCEECCEEECCCCCCCCCCCCHHHCC GHWLVRDHYNRQIYDYGYYGGPVFTPVVDDFNCDGRVDLGVYNNGTTDFAHWFILMTNNG CEEEEEECCCCEEEECCCCCCCEEECEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCC QQFDQGYLFREQRTQLTYQFYPPSYVQPTTPILIDIAGDGFDLSDEFGGVDFDITATGVP CCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHCCEEEEEEECCCE MHLAWTKADTDDAWLVLDRDGNGRIDNGKELFGNFTPQPRTGEPNGFLALAKFDKPGDGG EEEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC NGDGRIDAKDAVFAQLRLWQDTNHDGVSAPGELRTLRAMGVAGLGLNYAESRRTDAYGNQ CCCCEECCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC FRYRGLVQSVPGAPVGRVAYDVLLRFETKETAGLRAAGPQAAAQVEPRFELPPGGFPITE EEECHHHHHCCCCCHHHHEEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHH AAIVHDLATLRR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]