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The map label for this gene is 37520868

Identifier: 37520868

GI number: 37520868

Start: 1383793

End: 1385028

Strand: Reverse

Name: 37520868

Synonym: gll1299

Alternate gene names: NA

Gene position: 1385028-1383793 (Counterclockwise)

Preceding gene: 37520871

Following gene: 37520867

Centisome position: 29.73

GC content: 60.44

Gene sequence:

>1236_bases
ATGACTGAGACTACAGATTTGTATAGAATGAGTTCGAGTTTGCGCGTGGTTGCGCTCGCGGAAACTCTTCAGCGAGCGCG
GGCTTTTGCAAGCCGCTTGGGTATTATCCGCGTGACGGACACCACCCGGTTAGACTGCATCGGCATTCCTGTTTTTGCTA
GTATCCGACCCACGGCGCTGCCTGGTTCTCTGTGCGTCAATGCAGGCAAAGGGCTCCGTCCTGAGGAGGCGCGCGTCGGG
GCATACATGGAAGCCATTGAGTTTGCCATGGCCGAGTATGGGCGTTCGGCCGTCGATTACGTGATGGCCACACCGCGCGA
CGTCCTCGACGGCAGGAGTCGGCCAGAAGCTATTCTTGATTTTTGTCCTGTCTTCGGTGCCCAGATTACTCTCGATGACC
CGATGCCGTGCGTGGAAGCGGAGGAATTGCTCAGTTCGACGCGATGCCTGGTGCCGGCAGAACTCGTCTACGTGCCTGCC
CCGGCGGTAGAGGGGGTGCAGAGGCATTTCGGGTCGAGTTCGAATGGCCTGTGTTCCGGCAACTCCGTCTGGGAGGCAAG
CGTGCACGGACTGGCCGAGGTGATCGAACGGGACATCCAGTCATTTTGTTTCCTGCACGACACCTCGGTACTGGTGGACA
TCGCCTCGTTGCCGCCGCAGCCGGCCGCCCTGGCCCGGCAGATCGGCGAGGCCGGTTTCACCCTCCGGCTGCGTTACGTC
GAGAACATCTTCGAGTTGCCGTACTTCGCCGCTTACGTCATGGAGCCGGACCCGGTCGATGCCGTCTACATTTGCGGCGG
CTTTGGATGCCACCCTTTCAAGGAGATCGCCGCGGTGCGCGCTATCTGCGAAGCGGTCCAGGGGCGCCTGTCGTTCATCC
ATGGCGGGCGGGACGATCTAATCGAGCGCCACCGGCTGCTTGCCCAGATGAACGGCGAGCAGGAGTTGGCCTTCAGCCGA
AAACTGGCCGCTAAAGTCTCACGCCCCGAAGGAATGATTGGCTTTGAAGCGATTGGCGATCGATCAGGTGAAGTTTGCGA
TCTGTCCTCGGCCTGGGAGGTGCTCGTCGCCGCCATCCGGAAAGTGGGGATCGCGCATGTCTGCCGGGTCGTCTTCACCC
AGCCGCACGATCCGGTTCAGGTACTCAAGCTGATCGTGCCTCGCCTGGAGATGTTTGACCGAAGCACCAGACGGATTGGA
CCGAGGCTGAGGGACCATGCCCGATTTCATGAATAA

Upstream 100 bases:

>100_bases
ATGTGGCGCGATGGCTATTCACTCCACTGCGGGTCAGTAGCCGGCATTTTGCGCAGTGCTCTTTGCCGGCAATTTGTTGA
AAATAACTTCAAGTTGAAAA

Downstream 100 bases:

>100_bases
CTGCACGTTCTTCGTCGGCCCGACGCTGCAGGGCATCGAACCGCTCAAACACCTGCGATTGGATGTGACCTGTCTACCGC
CCGTGCGCCGCGGCGACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTETTDLYRMSSSLRVVALAETLQRARAFASRLGIIRVTDTTRLDCIGIPVFASIRPTALPGSLCVNAGKGLRPEEARVG
AYMEAIEFAMAEYGRSAVDYVMATPRDVLDGRSRPEAILDFCPVFGAQITLDDPMPCVEAEELLSSTRCLVPAELVYVPA
PAVEGVQRHFGSSSNGLCSGNSVWEASVHGLAEVIERDIQSFCFLHDTSVLVDIASLPPQPAALARQIGEAGFTLRLRYV
ENIFELPYFAAYVMEPDPVDAVYICGGFGCHPFKEIAAVRAICEAVQGRLSFIHGGRDDLIERHRLLAQMNGEQELAFSR
KLAAKVSRPEGMIGFEAIGDRSGEVCDLSSAWEVLVAAIRKVGIAHVCRVVFTQPHDPVQVLKLIVPRLEMFDRSTRRIG
PRLRDHARFHE

Sequences:

>Translated_411_residues
MTETTDLYRMSSSLRVVALAETLQRARAFASRLGIIRVTDTTRLDCIGIPVFASIRPTALPGSLCVNAGKGLRPEEARVG
AYMEAIEFAMAEYGRSAVDYVMATPRDVLDGRSRPEAILDFCPVFGAQITLDDPMPCVEAEELLSSTRCLVPAELVYVPA
PAVEGVQRHFGSSSNGLCSGNSVWEASVHGLAEVIERDIQSFCFLHDTSVLVDIASLPPQPAALARQIGEAGFTLRLRYV
ENIFELPYFAAYVMEPDPVDAVYICGGFGCHPFKEIAAVRAICEAVQGRLSFIHGGRDDLIERHRLLAQMNGEQELAFSR
KLAAKVSRPEGMIGFEAIGDRSGEVCDLSSAWEVLVAAIRKVGIAHVCRVVFTQPHDPVQVLKLIVPRLEMFDRSTRRIG
PRLRDHARFHE
>Mature_410_residues
TETTDLYRMSSSLRVVALAETLQRARAFASRLGIIRVTDTTRLDCIGIPVFASIRPTALPGSLCVNAGKGLRPEEARVGA
YMEAIEFAMAEYGRSAVDYVMATPRDVLDGRSRPEAILDFCPVFGAQITLDDPMPCVEAEELLSSTRCLVPAELVYVPAP
AVEGVQRHFGSSSNGLCSGNSVWEASVHGLAEVIERDIQSFCFLHDTSVLVDIASLPPQPAALARQIGEAGFTLRLRYVE
NIFELPYFAAYVMEPDPVDAVYICGGFGCHPFKEIAAVRAICEAVQGRLSFIHGGRDDLIERHRLLAQMNGEQELAFSRK
LAAKVSRPEGMIGFEAIGDRSGEVCDLSSAWEVLVAAIRKVGIAHVCRVVFTQPHDPVQVLKLIVPRLEMFDRSTRRIGP
RLRDHARFHE

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017667
- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 45159; Mature: 45027

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTDLYRMSSSLRVVALAETLQRARAFASRLGIIRVTDTTRLDCIGIPVFASIRPTAL
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEECCCCCCC
PGSLCVNAGKGLRPEEARVGAYMEAIEFAMAEYGRSAVDYVMATPRDVLDGRSRPEAILD
CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCHHHHHH
FCPVFGAQITLDDPMPCVEAEELLSSTRCLVPAELVYVPAPAVEGVQRHFGSSSNGLCSG
HHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCC
NSVWEASVHGLAEVIERDIQSFCFLHDTSVLVDIASLPPQPAALARQIGEAGFTLRLRYV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEHHHH
ENIFELPYFAAYVMEPDPVDAVYICGGFGCHPFKEIAAVRAICEAVQGRLSFIHGGRDDL
HHHHHCCHHEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IERHRLLAQMNGEQELAFSRKLAAKVSRPEGMIGFEAIGDRSGEVCDLSSAWEVLVAAIR
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCEECCHHHHHHHHHHHH
KVGIAHVCRVVFTQPHDPVQVLKLIVPRLEMFDRSTRRIGPRLRDHARFHE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCC
>Mature Secondary Structure 
TETTDLYRMSSSLRVVALAETLQRARAFASRLGIIRVTDTTRLDCIGIPVFASIRPTAL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEECCCCCCC
PGSLCVNAGKGLRPEEARVGAYMEAIEFAMAEYGRSAVDYVMATPRDVLDGRSRPEAILD
CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCHHHHHH
FCPVFGAQITLDDPMPCVEAEELLSSTRCLVPAELVYVPAPAVEGVQRHFGSSSNGLCSG
HHHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCC
NSVWEASVHGLAEVIERDIQSFCFLHDTSVLVDIASLPPQPAALARQIGEAGFTLRLRYV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEHHHH
ENIFELPYFAAYVMEPDPVDAVYICGGFGCHPFKEIAAVRAICEAVQGRLSFIHGGRDDL
HHHHHCCHHEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IERHRLLAQMNGEQELAFSRKLAAKVSRPEGMIGFEAIGDRSGEVCDLSSAWEVLVAAIR
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCEECCHHHHHHHHHHHH
KVGIAHVCRVVFTQPHDPVQVLKLIVPRLEMFDRSTRRIGPRLRDHARFHE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]