| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yngK [H]
Identifier: 37520863
GI number: 37520863
Start: 1375106
End: 1377496
Strand: Direct
Name: yngK [H]
Synonym: glr1294
Alternate gene names: 37520863
Gene position: 1375106-1377496 (Clockwise)
Preceding gene: 37520862
Following gene: 37520864
Centisome position: 29.51
GC content: 65.54
Gene sequence:
>2391_bases ATGGTGTGTGGAGTCCGCCGCTGGAAAGGAATTGTGCTCGCCCTTGTGCTGTGGTTGGCGTCGGCGCCGCTGATCCTGGC CGCCCAGGCCTATCCGATTGTGGTAGTCCAGCCCCCTGAGGCAGGAGCCTGGGATACGCTGCGGGGGCGTATCGAGCGGT TGAATCTGCGCTATCGGCCCCTGGCCCTCGCCGATTTGAGCCTGGAGCGGCTCGCCGAGGCCAAGGTGCTGTTTTTGCCG AATCTGACCAAGCTCACCCTCGAGCAGGCAAACGCCATCCAGCAGTGGGTGGACCGGGGCGGCAAGCTCATCGTCAGCGG ACCTTTCGGCACCGAATCGCCCCCTGAGGTGCGCGAAGCGCTCACCAACCTGGTGGGTGCCTACTGGATCGAACCGCTCA ATATCGTCTCGCGCGCCGAGGTGCAGCTGGTCCAGCCCTGGACGAAGCTCGGCAACACCGCCAGCGCTGTGCGCGGCGGC AGCCTGGTGCGGCCCGTGGGCAGCACCGCCAACATCGCGGCTACCTGGATCGGTGGCCTGGGCAATCCGGCGGTGCTCGT CAACGAGGATGTGACCTACCTGGGCTGGCAGTGGGGGACGACTTCACCGACTTTTGACCGCGACTGGCTGGCGGCGGCGA TCGAGCGCTTCTTGCCGGGGGCGGTGGGCAACCAGTTCAAAGTCGCGCCGGTCGAAGCGACCGCCATGTTCAAAGAACTG GAGGGGGTGCTGGGGCGCGTCGAGAGCGCTCTGCTCACCAGCGACGCGCGCTCGACAGCCCCCGAGCAGTTCCCGCCTGC CTACCGCGACGCCATCGCCCGCGCCCAGCGCACGCTCAAAGAATTGCCCGCCATGCTCAAAGACGGCCTCGACACCCAGG CGCGCGCCGCCTGGGAGGATGCCATCGAAGATCTGTGGGCGCACTATCCGACTTCGCAACTGGCGGCCCTGCCGGAGGTG CGCGCCATCTGGCTCGACCGGGGCACGATCGTCAAAGCCGGTTCTGAAGAGGGACTGACCCGCATCTTCGACCGCCTGGC CCAGTCGGGGATCAACACGGTCTTCTTTGAAACCGTCAACGCGGGCTACACGATTTACCCGAGTGCCGTCGCTCCTGCCC AAAATCCGCTCATTCGGGGCTGGGATCCGCTCGCGGCGGCGGTGCGCCTGGCCCACGAGCGCAAGATGGAACTGCACGCC TGGACGTGGGCGTTCGCGGCGGGCAACACGCGCCACAACGCGCTTATCGGCAAATCCCAGGACTTTCCCGGACCGGTCCT CGCCGCCCACCCCGGTTGGGCACAAAGCGGCCGCAAGGGCAATCTGCGCCCGGCGGGCCAACCCGAGTACTGGATGGACC CAGCCAATCCGGAAGTGCGCGCCTACTTGCAGAGTCTCTACGAGGAGATCCTCACCAACTACGATGTCGACGGGTTGCAG TTCGATTACATCCGCTATCCGCTCCAAAAGAACGCCGGTCAGTACTTCGGCTACTCCCCGGCGGCGCGCCGGAGCTTTGC CCAATTGACCGGCGTCGACCCGATCGACATCGCTCCTGAAGAAAGCTCGCTCTGGGCGCTGTGGACCCGCTTCAAAGCCG AGCAAGTGAGCAGCTTCGTCGCCGAATCCGCCGAGAAGCTGCGTCGCATCAAGCCGCGGCTCATCGTTTCGGCGGCGGTC TTTCCCAACCCTCCCGGCGAGCGGCTACGCCTGTTGCAGCAGGACTGGGAAGCGTGGGCGATCCAGGGCAACATCGACCT GCTGGTGCCGATGACCTACGCCCTCAATACCCGCCGCCTGCAGCAGCTGGTGGAGCCCACCCTCCCCGGCGTCAAAGAAG CGCCCGTGCTGATTTTGCCCAGCCTCAACCTGATGTCGCTGCCGCAGGTCCAACTGCGCGATCAGCTCCAGGCGGTGCGC GATTTGCCCTCCGGCGGTTACTCGCTTTTTGCCGCCGCCCACCTGGCGGATAACCACCAGCAGATGCTTGCCCAGGCTTC TTCCGCCTCCAATCTTCTGCCCTATCGCGACCCGCTTTCGACCGCCCTAGAGCGATTCACGGCCCTCAAGCGCGAGTGGG ATTTTTTGCTGGATCGTAAACAGATCTGGGTGGCTGAGTACAGCCTCAGCGAATGGCGCGCCCAGATTAAGCGCACCCAG GCCGCCCTCGAAACGTTGAGCAAGCAGCCGTCGGCCGGCTGGCTGCGCACCGCCCGCGAGCAGCTTCTGGCCATCCGCCA GGGTCTGGGCACCTGGCTGGGGCAAGAAAAAATCCTCAGACCCTATCGCCTGCAGACCTGGGAGAACCGGATCGATTCGC TCGACACGCTTTTGCGCTATGCCGAGGGCCGCCTCGACCGCCAGGTGCGCGCCGCCAGAACCGGCCGATAG
Upstream 100 bases:
>100_bases TCAATTACCGTTCTGATTCTCGATACAATCTTGAAGCGGCAATTTTGCCCATCAAACCCGCTTGATACTTTGTTAAACTT CCTACGTACTGGGGATCGCG
Downstream 100 bases:
>100_bases GCTGGAAAGCCCCCAATCGCATGAGCCGCTGTGCCCGCCGCGCGTCTATTGAACTGGCTTGCCTTTGGCGCCGCCGCGGC TCTCTGGCTTGCTCTACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MVCGVRRWKGIVLALVLWLASAPLILAAQAYPIVVVQPPEAGAWDTLRGRIERLNLRYRPLALADLSLERLAEAKVLFLP NLTKLTLEQANAIQQWVDRGGKLIVSGPFGTESPPEVREALTNLVGAYWIEPLNIVSRAEVQLVQPWTKLGNTASAVRGG SLVRPVGSTANIAATWIGGLGNPAVLVNEDVTYLGWQWGTTSPTFDRDWLAAAIERFLPGAVGNQFKVAPVEATAMFKEL EGVLGRVESALLTSDARSTAPEQFPPAYRDAIARAQRTLKELPAMLKDGLDTQARAAWEDAIEDLWAHYPTSQLAALPEV RAIWLDRGTIVKAGSEEGLTRIFDRLAQSGINTVFFETVNAGYTIYPSAVAPAQNPLIRGWDPLAAAVRLAHERKMELHA WTWAFAAGNTRHNALIGKSQDFPGPVLAAHPGWAQSGRKGNLRPAGQPEYWMDPANPEVRAYLQSLYEEILTNYDVDGLQ FDYIRYPLQKNAGQYFGYSPAARRSFAQLTGVDPIDIAPEESSLWALWTRFKAEQVSSFVAESAEKLRRIKPRLIVSAAV FPNPPGERLRLLQQDWEAWAIQGNIDLLVPMTYALNTRRLQQLVEPTLPGVKEAPVLILPSLNLMSLPQVQLRDQLQAVR DLPSGGYSLFAAAHLADNHQQMLAQASSASNLLPYRDPLSTALERFTALKREWDFLLDRKQIWVAEYSLSEWRAQIKRTQ AALETLSKQPSAGWLRTAREQLLAIRQGLGTWLGQEKILRPYRLQTWENRIDSLDTLLRYAEGRLDRQVRAARTGR
Sequences:
>Translated_796_residues MVCGVRRWKGIVLALVLWLASAPLILAAQAYPIVVVQPPEAGAWDTLRGRIERLNLRYRPLALADLSLERLAEAKVLFLP NLTKLTLEQANAIQQWVDRGGKLIVSGPFGTESPPEVREALTNLVGAYWIEPLNIVSRAEVQLVQPWTKLGNTASAVRGG SLVRPVGSTANIAATWIGGLGNPAVLVNEDVTYLGWQWGTTSPTFDRDWLAAAIERFLPGAVGNQFKVAPVEATAMFKEL EGVLGRVESALLTSDARSTAPEQFPPAYRDAIARAQRTLKELPAMLKDGLDTQARAAWEDAIEDLWAHYPTSQLAALPEV RAIWLDRGTIVKAGSEEGLTRIFDRLAQSGINTVFFETVNAGYTIYPSAVAPAQNPLIRGWDPLAAAVRLAHERKMELHA WTWAFAAGNTRHNALIGKSQDFPGPVLAAHPGWAQSGRKGNLRPAGQPEYWMDPANPEVRAYLQSLYEEILTNYDVDGLQ FDYIRYPLQKNAGQYFGYSPAARRSFAQLTGVDPIDIAPEESSLWALWTRFKAEQVSSFVAESAEKLRRIKPRLIVSAAV FPNPPGERLRLLQQDWEAWAIQGNIDLLVPMTYALNTRRLQQLVEPTLPGVKEAPVLILPSLNLMSLPQVQLRDQLQAVR DLPSGGYSLFAAAHLADNHQQMLAQASSASNLLPYRDPLSTALERFTALKREWDFLLDRKQIWVAEYSLSEWRAQIKRTQ AALETLSKQPSAGWLRTAREQLLAIRQGLGTWLGQEKILRPYRLQTWENRIDSLDTLLRYAEGRLDRQVRAARTGR >Mature_796_residues MVCGVRRWKGIVLALVLWLASAPLILAAQAYPIVVVQPPEAGAWDTLRGRIERLNLRYRPLALADLSLERLAEAKVLFLP NLTKLTLEQANAIQQWVDRGGKLIVSGPFGTESPPEVREALTNLVGAYWIEPLNIVSRAEVQLVQPWTKLGNTASAVRGG SLVRPVGSTANIAATWIGGLGNPAVLVNEDVTYLGWQWGTTSPTFDRDWLAAAIERFLPGAVGNQFKVAPVEATAMFKEL EGVLGRVESALLTSDARSTAPEQFPPAYRDAIARAQRTLKELPAMLKDGLDTQARAAWEDAIEDLWAHYPTSQLAALPEV RAIWLDRGTIVKAGSEEGLTRIFDRLAQSGINTVFFETVNAGYTIYPSAVAPAQNPLIRGWDPLAAAVRLAHERKMELHA WTWAFAAGNTRHNALIGKSQDFPGPVLAAHPGWAQSGRKGNLRPAGQPEYWMDPANPEVRAYLQSLYEEILTNYDVDGLQ FDYIRYPLQKNAGQYFGYSPAARRSFAQLTGVDPIDIAPEESSLWALWTRFKAEQVSSFVAESAEKLRRIKPRLIVSAAV FPNPPGERLRLLQQDWEAWAIQGNIDLLVPMTYALNTRRLQQLVEPTLPGVKEAPVLILPSLNLMSLPQVQLRDQLQAVR DLPSGGYSLFAAAHLADNHQQMLAQASSASNLLPYRDPLSTALERFTALKREWDFLLDRKQIWVAEYSLSEWRAQIKRTQ AALETLSKQPSAGWLRTAREQLLAIRQGLGTWLGQEKILRPYRLQTWENRIDSLDTLLRYAEGRLDRQVRAARTGR
Specific function: Unknown
COG id: COG1649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Attached to the membrane by a lipid anchor (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0748 family [H]
Homologues:
Organism=Escherichia coli, GI1787767, Length=302, Percent_Identity=25.1655629139073, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003790 - InterPro: IPR017853 [H]
Pfam domain/function: PF02638 DUF187 [H]
EC number: NA
Molecular weight: Translated: 88641; Mature: 88641
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCGVRRWKGIVLALVLWLASAPLILAAQAYPIVVVQPPEAGAWDTLRGRIERLNLRYRP CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCEECC LALADLSLERLAEAKVLFLPNLTKLTLEQANAIQQWVDRGGKLIVSGPFGTESPPEVREA EEHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH LTNLVGAYWIEPLNIVSRAEVQLVQPWTKLGNTASAVRGGSLVRPVGSTANIAATWIGGL HHHHHHHHHHCHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCEECCCCCCCCCHHHHHCCC GNPAVLVNEDVTYLGWQWGTTSPTFDRDWLAAAIERFLPGAVGNQFKVAPVEATAMFKEL CCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHH EGVLGRVESALLTSDARSTAPEQFPPAYRDAIARAQRTLKELPAMLKDGLDTQARAAWED HHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AIEDLWAHYPTSQLAALPEVRAIWLDRGTIVKAGSEEGLTRIFDRLAQSGINTVFFETVN HHHHHHHHCCHHHHHHCCCHHEEEECCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEECC AGYTIYPSAVAPAQNPLIRGWDPLAAAVRLAHERKMELHAWTWAFAAGNTRHNALIGKSQ CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEECCCC DFPGPVLAAHPGWAQSGRKGNLRPAGQPEYWMDPANPEVRAYLQSLYEEILTNYDVDGLQ CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE FDYIRYPLQKNAGQYFGYSPAARRSFAQLTGVDPIDIAPEESSLWALWTRFKAEQVSSFV EHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AESAEKLRRIKPRLIVSAAVFPNPPGERLRLLQQDWEAWAIQGNIDLLVPMTYALNTRRL HHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHCCHHEEEECCCEEEEEHHHHHCHHHH QQLVEPTLPGVKEAPVLILPSLNLMSLPQVQLRDQLQAVRDLPSGGYSLFAAAHLADNHQ HHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHH QMLAQASSASNLLPYRDPLSTALERFTALKREWDFLLDRKQIWVAEYSLSEWRAQIKRTQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHH AALETLSKQPSAGWLRTAREQLLAIRQGLGTWLGQEKILRPYRLQTWENRIDSLDTLLRY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHH AEGRLDRQVRAARTGR HHHHHHHHHHHHCCCC >Mature Secondary Structure MVCGVRRWKGIVLALVLWLASAPLILAAQAYPIVVVQPPEAGAWDTLRGRIERLNLRYRP CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCEECC LALADLSLERLAEAKVLFLPNLTKLTLEQANAIQQWVDRGGKLIVSGPFGTESPPEVREA EEHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH LTNLVGAYWIEPLNIVSRAEVQLVQPWTKLGNTASAVRGGSLVRPVGSTANIAATWIGGL HHHHHHHHHHCHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCEECCCCCCCCCHHHHHCCC GNPAVLVNEDVTYLGWQWGTTSPTFDRDWLAAAIERFLPGAVGNQFKVAPVEATAMFKEL CCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHH EGVLGRVESALLTSDARSTAPEQFPPAYRDAIARAQRTLKELPAMLKDGLDTQARAAWED HHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AIEDLWAHYPTSQLAALPEVRAIWLDRGTIVKAGSEEGLTRIFDRLAQSGINTVFFETVN HHHHHHHHCCHHHHHHCCCHHEEEECCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEECC AGYTIYPSAVAPAQNPLIRGWDPLAAAVRLAHERKMELHAWTWAFAAGNTRHNALIGKSQ CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEECCCC DFPGPVLAAHPGWAQSGRKGNLRPAGQPEYWMDPANPEVRAYLQSLYEEILTNYDVDGLQ CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE FDYIRYPLQKNAGQYFGYSPAARRSFAQLTGVDPIDIAPEESSLWALWTRFKAEQVSSFV EHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AESAEKLRRIKPRLIVSAAVFPNPPGERLRLLQQDWEAWAIQGNIDLLVPMTYALNTRRL HHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHCCHHEEEECCCEEEEEHHHHHCHHHH QQLVEPTLPGVKEAPVLILPSLNLMSLPQVQLRDQLQAVRDLPSGGYSLFAAAHLADNHQ HHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHH QMLAQASSASNLLPYRDPLSTALERFTALKREWDFLLDRKQIWVAEYSLSEWRAQIKRTQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHH AALETLSKQPSAGWLRTAREQLLAIRQGLGTWLGQEKILRPYRLQTWENRIDSLDTLLRY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHH AEGRLDRQVRAARTGR HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]