Click here to switch to the map view.

The map label for this gene is cpeS [H]

Identifier: 37520761

GI number: 37520761

Start: 1269144

End: 1269686

Strand: Direct

Name: cpeS [H]

Synonym: gvip162

Alternate gene names: 37520761

Gene position: 1269144-1269686 (Clockwise)

Preceding gene: 37520760

Following gene: 37520762

Centisome position: 27.24

GC content: 63.35

Gene sequence:

>543_bases
GTGGTCATCGTGAAGCACGTCACCGAATTTTTTGAGCAGTCCTTTGGCCGTTGGCGCTCCCAGCGCAGCGGTCACCACTT
GGCCTTCAGCCACTTTGAAGAGGTACGCTCGACCATCGATATCGAGCCGCTGACGGCCGCCGACCCGGCGGTGGCGGAAC
TGTGCCATCGCTACGGTGTCTCTGCCGAAGCGATCACCCACCCATTTCGCATGCGCTGGCAGGGCGAGTCGGACTGGGAG
GAAAACGCCACTTTCGAGGGTTCCACCGTGCTGGTACCGGTGCCTGACCCCGGCGACGCCACCAGAGGCAAGCTGCTGCG
CGATCAAGGTTACGCCGAGACGGTGGCGGCGGTGGGCGAGTACGCCTTTGGCCCCGACGGCACCTTTGTGCTGTTCACCG
ATTACGAGCGGGCGAGTGCGGAGGAGCGCATCTGGTTTGCGACGCCCAATGTGCGCTTTCGCGTCTCGCTTATCCGCACA
CGCGACGGAGCCGGGGTGACTACCGCTTCGTTTTCTTCCGAAATCCGCGCCCTTGCGAAGTAG

Upstream 100 bases:

>100_bases
AAGCGCGTGGATGCGGCAGCGGCGGCCGTGGAGTCCCAGGAGCGCACCGCCGTCCAGACCGAGCGCTCCTACTCGCTGTG
GGGTTGGTAACTTCCCTGCT

Downstream 100 bases:

>100_bases
CGATGACCACCGCACCCTCCGAGGATTTGCTGACCCTGGCGCGCTGGATGGCGGGCGATTTTAGCAATCAAAAGCAGGCC
CTCGCCCAACCGCAGACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MVIVKHVTEFFEQSFGRWRSQRSGHHLAFSHFEEVRSTIDIEPLTAADPAVAELCHRYGVSAEAITHPFRMRWQGESDWE
ENATFEGSTVLVPVPDPGDATRGKLLRDQGYAETVAAVGEYAFGPDGTFVLFTDYERASAEERIWFATPNVRFRVSLIRT
RDGAGVTTASFSSEIRALAK

Sequences:

>Translated_180_residues
MVIVKHVTEFFEQSFGRWRSQRSGHHLAFSHFEEVRSTIDIEPLTAADPAVAELCHRYGVSAEAITHPFRMRWQGESDWE
ENATFEGSTVLVPVPDPGDATRGKLLRDQGYAETVAAVGEYAFGPDGTFVLFTDYERASAEERIWFATPNVRFRVSLIRT
RDGAGVTTASFSSEIRALAK
>Mature_180_residues
MVIVKHVTEFFEQSFGRWRSQRSGHHLAFSHFEEVRSTIDIEPLTAADPAVAELCHRYGVSAEAITHPFRMRWQGESDWE
ENATFEGSTVLVPVPDPGDATRGKLLRDQGYAETVAAVGEYAFGPDGTFVLFTDYERASAEERIWFATPNVRFRVSLIRT
RDGAGVTTASFSSEIRALAK

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 20158; Mature: 20158

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIVKHVTEFFEQSFGRWRSQRSGHHLAFSHFEEVRSTIDIEPLTAADPAVAELCHRYGV
CEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
SAEAITHPFRMRWQGESDWEENATFEGSTVLVPVPDPGDATRGKLLRDQGYAETVAAVGE
CHHHHCCCEEEEECCCCCCCCCCEECCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHH
YAFGPDGTFVLFTDYERASAEERIWFATPNVRFRVSLIRTRDGAGVTTASFSSEIRALAK
HCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCC
>Mature Secondary Structure
MVIVKHVTEFFEQSFGRWRSQRSGHHLAFSHFEEVRSTIDIEPLTAADPAVAELCHRYGV
CEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
SAEAITHPFRMRWQGESDWEENATFEGSTVLVPVPDPGDATRGKLLRDQGYAETVAAVGE
CHHHHCCCEEEEECCCCCCCCCCEECCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHH
YAFGPDGTFVLFTDYERASAEERIWFATPNVRFRVSLIRTRDGAGVTTASFSSEIRALAK
HCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA