| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520743
Identifier: 37520743
GI number: 37520743
Start: 1251578
End: 1252579
Strand: Direct
Name: 37520743
Synonym: glr1174
Alternate gene names: NA
Gene position: 1251578-1252579 (Clockwise)
Preceding gene: 37520742
Following gene: 37520744
Centisome position: 26.86
GC content: 61.88
Gene sequence:
>1002_bases GTGGCGGCGCTGTTGGCAAAAATACCAGGACAGCTCTATCTGTGGGTCGCAGTCGCGATCTTCGCCGCCTCGGGCGCTGT GACGAAACAGTTGACCGAACTGGGCACCCAGCACCCAATCGACGGCAGAAACCCGATTTCATTTTGCAATTTGTTGTTCG TCGGCAATCTCTGCGCCCTGCTGGTCCTGATTCCCCTCTACCGCAAGCAGCTGAGCCCGGCCATTTTGCGGCAGTTTTCC CGCGGCGACTGGTTGGGGATGGTGGCGGTGGCTCTGCTCGCGGGCGCTCTGGCCCCGGCGCTCATCTTGATCGCCCTTTC CCAGACCATGATCAACGACGTCACCCTGGTGGGCCGTCTCGAACCGCTGTTGACGCTTGCCCTCTCGGCCTGGTGGCTGC GCGAACGCCCTACCCCCTGGCAGACCACCGGTGCCGCCGTGTGTTTTTTGGGGGTGATCGTCACCGTAACTTTGCAGGGA GTTTCGGCGGGCGGCATGGCCGCGCTGCACTTGAGCACCACGGGCCGGGGGGAATGGCTGACCGCATTCGGGGCGGTGGC CCTGGCACTTGCGAATATCATCAGCCGCGCGCGCCTCGGCCGTATTCCGATCGGGACTTTCGCCGTCGTGCGTACGACTT TGGGAACGGTCATATTTTTTGGCATCGCCCTTTACCTGTTTGGCAGCCACCATTTCGTCGACGCGTTTTCGCCATTTCTC TGGGAGTGGATGCTGCTGTACGGCATGCTTATTGTCGTGGTCGGCCAATCGCTCTGGCTTCTGGGCCTCAAGCGCGCCGG CTCCGCTCAAGCTGCCGTCATCCAAGCTTTTCATCCGCTCGGGGCGATTTTAGCCGCTTACTGGCTTTTGGGGGAGGCGC CCACCCCGGCTCAGTATGCGGGAGGCGGCATCATTCTTTTCGGTATTGCCTTAAGTCTTGTGGGAAGCGGGCGCACCACA GCGCCACCCCCGGGAGCGGGCATGGGATTTAAAGGCTGGTAG
Upstream 100 bases:
>100_bases TGCGCGCACCGGCCGCCGGAAGTTCCGGGGGGCCGGATCCCTCCCACAACTGACGGGGCTGTGCCGCCGGACCTGTAGAG CATCTAGCGAGGATTGCCTT
Downstream 100 bases:
>100_bases AGCTGTGTAAGCTCAAAAAGAGGTAGGAATGTTGTTGAGCAACACGATGTTGTTGAGTAACATTTCGAGTTTTGCTGGTA GGTCAGCTGAAGACAGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MAALLAKIPGQLYLWVAVAIFAASGAVTKQLTELGTQHPIDGRNPISFCNLLFVGNLCALLVLIPLYRKQLSPAILRQFS RGDWLGMVAVALLAGALAPALILIALSQTMINDVTLVGRLEPLLTLALSAWWLRERPTPWQTTGAAVCFLGVIVTVTLQG VSAGGMAALHLSTTGRGEWLTAFGAVALALANIISRARLGRIPIGTFAVVRTTLGTVIFFGIALYLFGSHHFVDAFSPFL WEWMLLYGMLIVVVGQSLWLLGLKRAGSAQAAVIQAFHPLGAILAAYWLLGEAPTPAQYAGGGIILFGIALSLVGSGRTT APPPGAGMGFKGW
Sequences:
>Translated_333_residues MAALLAKIPGQLYLWVAVAIFAASGAVTKQLTELGTQHPIDGRNPISFCNLLFVGNLCALLVLIPLYRKQLSPAILRQFS RGDWLGMVAVALLAGALAPALILIALSQTMINDVTLVGRLEPLLTLALSAWWLRERPTPWQTTGAAVCFLGVIVTVTLQG VSAGGMAALHLSTTGRGEWLTAFGAVALALANIISRARLGRIPIGTFAVVRTTLGTVIFFGIALYLFGSHHFVDAFSPFL WEWMLLYGMLIVVVGQSLWLLGLKRAGSAQAAVIQAFHPLGAILAAYWLLGEAPTPAQYAGGGIILFGIALSLVGSGRTT APPPGAGMGFKGW >Mature_332_residues AALLAKIPGQLYLWVAVAIFAASGAVTKQLTELGTQHPIDGRNPISFCNLLFVGNLCALLVLIPLYRKQLSPAILRQFSR GDWLGMVAVALLAGALAPALILIALSQTMINDVTLVGRLEPLLTLALSAWWLRERPTPWQTTGAAVCFLGVIVTVTLQGV SAGGMAALHLSTTGRGEWLTAFGAVALALANIISRARLGRIPIGTFAVVRTTLGTVIFFGIALYLFGSHHFVDAFSPFLW EWMLLYGMLIVVVGQSLWLLGLKRAGSAQAAVIQAFHPLGAILAAYWLLGEAPTPAQYAGGGIILFGIALSLVGSGRTTA PPPGAGMGFKGW
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35166; Mature: 35035
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALLAKIPGQLYLWVAVAIFAASGAVTKQLTELGTQHPIDGRNPISFCNLLFVGNLCAL CCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LVLIPLYRKQLSPAILRQFSRGDWLGMVAVALLAGALAPALILIALSQTMINDVTLVGRL HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPLLTLALSAWWLRERPTPWQTTGAAVCFLGVIVTVTLQGVSAGGMAALHLSTTGRGEWL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH TAFGAVALALANIISRARLGRIPIGTFAVVRTTLGTVIFFGIALYLFGSHHFVDAFSPFL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WEWMLLYGMLIVVVGQSLWLLGLKRAGSAQAAVIQAFHPLGAILAAYWLLGEAPTPAQYA HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHC GGGIILFGIALSLVGSGRTTAPPPGAGMGFKGW CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AALLAKIPGQLYLWVAVAIFAASGAVTKQLTELGTQHPIDGRNPISFCNLLFVGNLCAL CCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LVLIPLYRKQLSPAILRQFSRGDWLGMVAVALLAGALAPALILIALSQTMINDVTLVGRL HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPLLTLALSAWWLRERPTPWQTTGAAVCFLGVIVTVTLQGVSAGGMAALHLSTTGRGEWL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH TAFGAVALALANIISRARLGRIPIGTFAVVRTTLGTVIFFGIALYLFGSHHFVDAFSPFL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WEWMLLYGMLIVVVGQSLWLLGLKRAGSAQAAVIQAFHPLGAILAAYWLLGEAPTPAQYA HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHC GGGIILFGIALSLVGSGRTTAPPPGAGMGFKGW CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]