Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37520716

Identifier: 37520716

GI number: 37520716

Start: 1225575

End: 1226015

Strand: Reverse

Name: 37520716

Synonym: gll1147

Alternate gene names: NA

Gene position: 1226015-1225575 (Counterclockwise)

Preceding gene: 37520719

Following gene: 37520711

Centisome position: 26.31

GC content: 61.0

Gene sequence:

>441_bases
ATGTCGAATTGTCATTTCGTCCGTTTTCTAGCGGCGGCAGCAATTGCCCAAGGCACGCTGCTGTCGGTAGCGGTCCAGGC
CGGGCCAGTCTTCGAGGTAGCCCAGGTGCCTGCCGAGCGCCGTCCGGAAGTGGTGCAGATCAACAGCTTCGTAGTCACCC
CCAGCGACAAGTACGATCCGGGGACGAAGCTGATGTTCAAGGTAGAAGGTACCGCCAATTCCAAGGCCTTCCTGACTGTC
CCCGGTTCGACGGATCCACTGCCCATGGAAGAAGTCAAACCCGGCGTCTACGAGCGCAGTTACGTGGTCAGGCGTGAAGG
CGATCAGATCGAGCGGTTTACCAATGTGCGCGCCGACCTCAAGCGCGGTACCAACGTCACCACCGCCACCTTGAAGCTGG
GGGAGACGGCTGTGACCCCCGGCCAGGGCCAGCGCAAATAG

Upstream 100 bases:

>100_bases
AGACGGACCTATCGCCACAATCGCGTGTAATTGATATCGATAACGGCGGCGCAATCGATCCCGACGTCGATGCTTGCCGT
AGTGCACGCAAGGAGTCATT

Downstream 100 bases:

>100_bases
GGCCGCGACCAGGGGTATACCTACCTCGTCCGACTCACTTCGGTGCGAACTGTTTGCGCAGTTCGCGCTTCAGAATTTTG
CCGGTCGCCGATTTGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSNCHFVRFLAAAAIAQGTLLSVAVQAGPVFEVAQVPAERRPEVVQINSFVVTPSDKYDPGTKLMFKVEGTANSKAFLTV
PGSTDPLPMEEVKPGVYERSYVVRREGDQIERFTNVRADLKRGTNVTTATLKLGETAVTPGQGQRK

Sequences:

>Translated_146_residues
MSNCHFVRFLAAAAIAQGTLLSVAVQAGPVFEVAQVPAERRPEVVQINSFVVTPSDKYDPGTKLMFKVEGTANSKAFLTV
PGSTDPLPMEEVKPGVYERSYVVRREGDQIERFTNVRADLKRGTNVTTATLKLGETAVTPGQGQRK
>Mature_145_residues
SNCHFVRFLAAAAIAQGTLLSVAVQAGPVFEVAQVPAERRPEVVQINSFVVTPSDKYDPGTKLMFKVEGTANSKAFLTVP
GSTDPLPMEEVKPGVYERSYVVRREGDQIERFTNVRADLKRGTNVTTATLKLGETAVTPGQGQRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15852; Mature: 15721

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNCHFVRFLAAAAIAQGTLLSVAVQAGPVFEVAQVPAERRPEVVQINSFVVTPSDKYDP
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHCCCCEEEEEEEEECCCCCCCC
GTKLMFKVEGTANSKAFLTVPGSTDPLPMEEVKPGVYERSYVVRREGDQIERFTNVRADL
CCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHH
KRGTNVTTATLKLGETAVTPGQGQRK
HCCCCEEEEEEEECCEEECCCCCCCC
>Mature Secondary Structure 
SNCHFVRFLAAAAIAQGTLLSVAVQAGPVFEVAQVPAERRPEVVQINSFVVTPSDKYDP
CCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHCCCCEEEEEEEEECCCCCCCC
GTKLMFKVEGTANSKAFLTVPGSTDPLPMEEVKPGVYERSYVVRREGDQIERFTNVRADL
CCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHH
KRGTNVTTATLKLGETAVTPGQGQRK
HCCCCEEEEEEEECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA