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The map label for this gene is ygeR [H]

Identifier: 37520711

GI number: 37520711

Start: 1218679

End: 1219740

Strand: Reverse

Name: ygeR [H]

Synonym: gll1142

Alternate gene names: 37520711

Gene position: 1219740-1218679 (Counterclockwise)

Preceding gene: 37520716

Following gene: 37520710

Centisome position: 26.18

GC content: 69.4

Gene sequence:

>1062_bases
GTGCACGGACCTATGATCCCCCAGCCAAAGGCGCAGACGGTGACGGCACAGAGGTGGTCGCCCGCCCGGGTCGCCCAGCG
CCGACGGTCATGGGGCGGGTGGGCTGCGGGGGCGCTCGCGGTGGCGGTTGCCGCAGGCGGTGCCATCGCTTTGCGCAACG
CCGCCCCTGTCGAGCAGACCGCCGATGCCAACCTCGTCCTGCTGCTGCAGCAACACAGTCAATCCAAAGTGATCGCCGCC
CTGGCGGCCGTCGAAAGCGGCACCCTCGCAATGCTCGACGGCCGCCGCTCGGTGGTGAGTCATCCGGTATCGGCGGGCGA
CACGCTCGCGTCGCTGGCGGCGGCCTACAAGCTGGATGCCCGCTCGATCGCTTTTTCCAACGGCTTGGACCCGCAAAGTC
CGCTCACCCCGAGCCAGAAACTGCTCATTCCGCCGGTGGACGGTCTGGTCTACCGGGTCCAACGCCGCGATACTCTAGTC
GCCGTCTCCGAGCGCCACCGCGTCCCGATCACCGCCATCGCCAAAGCCACCGGACCGGGTTTTCAGGACTTTATTTCCCC
CGGCCAGTTGCTGGTCATTCCCGGCGACGCCGAGGCGCTTGCGGCCTTCAGCCGGGCCGCCGCCGAGCCGGCCAACGCCC
TCGCATCGCTTGCCGTCACGGGTCGCGGCGTCTCCAAAGCTCCCCGCTCGCCGCGCGGCTACGTGTGGCCCGTCCGGGGC
TTCGTGATTTCGCCCTACGGCCCGCGCGGGGGCCGTAGGCACATGGGAATCGATATTGCCGGGCCGAGCGGTTCGCCCGT
GGCCACCGTCCGCCGGGGGACGGTGCTGTTTGCCGGGTGGATGTCCGGCGGCTTCGGCAACGCCGTCGATGTCCGCCACG
AGGACGGCATGGTCAGCCGCTACGCCCATCTGTCGCGCATCCTCGTCCGCCCGGACCAGATCCTCGAAGCCGGTCAGATT
CTCGGAGCCACCGGCTGCACCGGCCGCTGCACCGGTCCGCATCTGCACCTGGAGTTGCACGTGGGCGGCCGGGCGGTCAA
CCCGCTGCCTTTTTTGAAATGA

Upstream 100 bases:

>100_bases
CTGAATTGATCCGCTACGCTTTCGGGGTATCTTGTGCTCAACCGCCGAACGCCCCGGGCTCGATTCGGATCGGCCGGGCG
GTTGGGCCAGTTGTTTCGGA

Downstream 100 bases:

>100_bases
GCTATCTTGGGGCAAGCTTGGCGATGGAAGCGTCTCCTGAATGATCAGGAACTATCCATTCCGCCCGGTCGTCCCCGCTT
AAGATAATCCCAGTTTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MHGPMIPQPKAQTVTAQRWSPARVAQRRRSWGGWAAGALAVAVAAGGAIALRNAAPVEQTADANLVLLLQQHSQSKVIAA
LAAVESGTLAMLDGRRSVVSHPVSAGDTLASLAAAYKLDARSIAFSNGLDPQSPLTPSQKLLIPPVDGLVYRVQRRDTLV
AVSERHRVPITAIAKATGPGFQDFISPGQLLVIPGDAEALAAFSRAAAEPANALASLAVTGRGVSKAPRSPRGYVWPVRG
FVISPYGPRGGRRHMGIDIAGPSGSPVATVRRGTVLFAGWMSGGFGNAVDVRHEDGMVSRYAHLSRILVRPDQILEAGQI
LGATGCTGRCTGPHLHLELHVGGRAVNPLPFLK

Sequences:

>Translated_353_residues
MHGPMIPQPKAQTVTAQRWSPARVAQRRRSWGGWAAGALAVAVAAGGAIALRNAAPVEQTADANLVLLLQQHSQSKVIAA
LAAVESGTLAMLDGRRSVVSHPVSAGDTLASLAAAYKLDARSIAFSNGLDPQSPLTPSQKLLIPPVDGLVYRVQRRDTLV
AVSERHRVPITAIAKATGPGFQDFISPGQLLVIPGDAEALAAFSRAAAEPANALASLAVTGRGVSKAPRSPRGYVWPVRG
FVISPYGPRGGRRHMGIDIAGPSGSPVATVRRGTVLFAGWMSGGFGNAVDVRHEDGMVSRYAHLSRILVRPDQILEAGQI
LGATGCTGRCTGPHLHLELHVGGRAVNPLPFLK
>Mature_353_residues
MHGPMIPQPKAQTVTAQRWSPARVAQRRRSWGGWAAGALAVAVAAGGAIALRNAAPVEQTADANLVLLLQQHSQSKVIAA
LAAVESGTLAMLDGRRSVVSHPVSAGDTLASLAAAYKLDARSIAFSNGLDPQSPLTPSQKLLIPPVDGLVYRVQRRDTLV
AVSERHRVPITAIAKATGPGFQDFISPGQLLVIPGDAEALAAFSRAAAEPANALASLAVTGRGVSKAPRSPRGYVWPVRG
FVISPYGPRGGRRHMGIDIAGPSGSPVATVRRGTVLFAGWMSGGFGNAVDVRHEDGMVSRYAHLSRILVRPDQILEAGQI
LGATGCTGRCTGPHLHLELHVGGRAVNPLPFLK

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=211, Percent_Identity=29.8578199052133, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=39.8305084745763, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081989, Length=96, Percent_Identity=45.8333333333333, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082297, Length=129, Percent_Identity=36.4341085271318, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 36881; Mature: 36881

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGPMIPQPKAQTVTAQRWSPARVAQRRRSWGGWAAGALAVAVAAGGAIALRNAAPVEQT
CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC
ADANLVLLLQQHSQSKVIAALAAVESGTLAMLDGRRSVVSHPVSAGDTLASLAAAYKLDA
CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCC
RSIAFSNGLDPQSPLTPSQKLLIPPVDGLVYRVQRRDTLVAVSERHRVPITAIAKATGPG
HHEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCC
FQDFISPGQLLVIPGDAEALAAFSRAAAEPANALASLAVTGRGVSKAPRSPRGYVWPVRG
HHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCCCEEEECC
FVISPYGPRGGRRHMGIDIAGPSGSPVATVRRGTVLFAGWMSGGFGNAVDVRHEDGMVSR
EEECCCCCCCCCEEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHH
YAHLSRILVRPDQILEAGQILGATGCTGRCTGPHLHLELHVGGRAVNPLPFLK
HHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCEEEEEEEECCEECCCCCCCC
>Mature Secondary Structure
MHGPMIPQPKAQTVTAQRWSPARVAQRRRSWGGWAAGALAVAVAAGGAIALRNAAPVEQT
CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC
ADANLVLLLQQHSQSKVIAALAAVESGTLAMLDGRRSVVSHPVSAGDTLASLAAAYKLDA
CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCC
RSIAFSNGLDPQSPLTPSQKLLIPPVDGLVYRVQRRDTLVAVSERHRVPITAIAKATGPG
HHEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCC
FQDFISPGQLLVIPGDAEALAAFSRAAAEPANALASLAVTGRGVSKAPRSPRGYVWPVRG
HHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCCCEEEECC
FVISPYGPRGGRRHMGIDIAGPSGSPVATVRRGTVLFAGWMSGGFGNAVDVRHEDGMVSR
EEECCCCCCCCCEEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHH
YAHLSRILVRPDQILEAGQILGATGCTGRCTGPHLHLELHVGGRAVNPLPFLK
HHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCEEEEEEEECCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]