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The map label for this gene is glf [C]

Identifier: 37520704

GI number: 37520704

Start: 1214065

End: 1215528

Strand: Reverse

Name: glf [C]

Synonym: gll1135

Alternate gene names: 37520704

Gene position: 1215528-1214065 (Counterclockwise)

Preceding gene: 37520705

Following gene: 37520703

Centisome position: 26.09

GC content: 63.66

Gene sequence:

>1464_bases
ATGGCAGAAAAGCAGGTCATCGTCATCGGCGCGGGTCCGGCCGGATTGACCGCCGCCTACGAACTGAGCCGCCTCGGAGT
CGCAGCGACCATCCTCGAGCGCAGCGCCCACGTGGGAGGGATCAGCCGCACCGCGAGCTACAAAGGCTTTCGTTTCGACA
TCGGCGGCCATCGTTTTTTCTCCAAATCTCAAGAAATCGAAGATCTCTGGAGCGAGGTGCTCGGGGCGCGTTTGCTCGAG
CGCGGCCGGCTTTCGCGCATCTTCTACCGCAACCGCTTTTTTGACTACCCGATTCGGCCGCTCAACGCCCTCGCCAACCT
CGGTCCGGCGACCGCCGCTCTGTGCGTGGCAAGCTATCTCAAGGCGCGGGTTCTGCCGCCGCGGGAGGTGCGCTCCTTCG
AAGACTGGACGGTGCGCTCCTTCGGGCGGACCCTGTACGAGATTTTTTTTAAGACCTATACCGAAAAAGTCTGGGGGATG
CCCTGCTCGGAGATTTCTGCCGACTGGGCGGCCCAGCGCATCAAGGGGCTTTCGATGGCCTCGCTGATGCGCTCGATGTT
CTTGCCCAAACCAAAAGGGCGCGGAGCGGTGATCAAGACCCTCATCGACCGCTTTCGCTATCCCGGCCGCGGTCCGGGGG
AGATGTGGGAAACGGTCGCCCGGATAGTAACCGGGCGCGGCCATCGGCTGGTCTTCGAGGCCGCAGTCGAGCGCATCGAG
CGGGCAAGTGCGGGACTGCTGCGCGTCTGGACGGCGGACGGACGCTCTTACGCAGGCAGCGATTTTCTTTCCACCATGCC
GCTGCGCGAACTGGTGAACGCCCTCGACCCGCCCGCCCCGAGTGCGGTGCAAACCGCTGCCCGCGCCCTGGGCTACCGCG
ATTTTTTGACCGTGGCGCTCATCGTGGATCAGACCCAGGTCTTTCCGGACAACTGGATCTACATCCACGACCCCACCGTC
AAGATGGGCCGCATCCAGAACTTTAAGAACTGGAGCCCCGAGATGGTGCCCGATGCGCGTTACACCTGCCTGGGGCTCGA
GTACTTCTGCTTCGAAGGCGACGGCCTCTGGAGCGCCCCGGACAGCGAACTGGTCGCCCTGGGCTGCGCGGAACTGGCCA
AACTGGGCCTGGTGGACCCGGCAAAAGTGGTGGACGGCACCGTCGTGCGCCAGGCCAAAGCCTACCCGGTCTACGACGAT
CACTACCGCGAGAACGTCGAAGCGATCCGCGCCTTTTTGGAACGCGAAGCGCCGAATTTGCAGCTGATCGGCCGCAACGG
CATGCACCGCTACAACAACCAGGACCACGCGATGATGACGGGGTTGCTCGCCGCACGCAACATCGCGGCGGGAGGCCAGT
ACAACCTCTGGGCCGTCAACGCCGACGCCCAGTATCAAGAAGAAATCCGCGAAGGCGAACTCGATGGCGGCGGACGCCTG
GTGCCCGAGCGGCTGAAAACCTGA

Upstream 100 bases:

>100_bases
TCAAAGAAATTGCCCGCACCGGCAAAATTTCCCTCACCCGCGAGTCGGGGGTGAACACCGAATTTCTGCGCACCCAGCCG
CCTGCGGCGACGCGGGTCTG

Downstream 100 bases:

>100_bases
CGTTGTGCCCCTTTAGGCGCTATACTACGGCTATACTACAGGACTCGGCCGAGCCAAGGAGCATACCGATGCATACACTC
CCACGCACTTCGACCACCGA

Product: hypothetical protein

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: UDP-Galactopyranose Mutase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Protoporphyrinogen Oxidase-Like Protein; Amine Oxidase Flavin-Containing Superfamily; Flavin Containing Amine Oxidoreductase; Amine Oxidase Family Protein; LOW QUALITY PROTEIN Protoporphyrinogen Oxidase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Teichuronic Acid Biosynthesis Glycosyltransferase TuaH; Oxidase

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MAEKQVIVIGAGPAGLTAAYELSRLGVAATILERSAHVGGISRTASYKGFRFDIGGHRFFSKSQEIEDLWSEVLGARLLE
RGRLSRIFYRNRFFDYPIRPLNALANLGPATAALCVASYLKARVLPPREVRSFEDWTVRSFGRTLYEIFFKTYTEKVWGM
PCSEISADWAAQRIKGLSMASLMRSMFLPKPKGRGAVIKTLIDRFRYPGRGPGEMWETVARIVTGRGHRLVFEAAVERIE
RASAGLLRVWTADGRSYAGSDFLSTMPLRELVNALDPPAPSAVQTAARALGYRDFLTVALIVDQTQVFPDNWIYIHDPTV
KMGRIQNFKNWSPEMVPDARYTCLGLEYFCFEGDGLWSAPDSELVALGCAELAKLGLVDPAKVVDGTVVRQAKAYPVYDD
HYRENVEAIRAFLEREAPNLQLIGRNGMHRYNNQDHAMMTGLLAARNIAAGGQYNLWAVNADAQYQEEIREGELDGGGRL
VPERLKT

Sequences:

>Translated_487_residues
MAEKQVIVIGAGPAGLTAAYELSRLGVAATILERSAHVGGISRTASYKGFRFDIGGHRFFSKSQEIEDLWSEVLGARLLE
RGRLSRIFYRNRFFDYPIRPLNALANLGPATAALCVASYLKARVLPPREVRSFEDWTVRSFGRTLYEIFFKTYTEKVWGM
PCSEISADWAAQRIKGLSMASLMRSMFLPKPKGRGAVIKTLIDRFRYPGRGPGEMWETVARIVTGRGHRLVFEAAVERIE
RASAGLLRVWTADGRSYAGSDFLSTMPLRELVNALDPPAPSAVQTAARALGYRDFLTVALIVDQTQVFPDNWIYIHDPTV
KMGRIQNFKNWSPEMVPDARYTCLGLEYFCFEGDGLWSAPDSELVALGCAELAKLGLVDPAKVVDGTVVRQAKAYPVYDD
HYRENVEAIRAFLEREAPNLQLIGRNGMHRYNNQDHAMMTGLLAARNIAAGGQYNLWAVNADAQYQEEIREGELDGGGRL
VPERLKT
>Mature_486_residues
AEKQVIVIGAGPAGLTAAYELSRLGVAATILERSAHVGGISRTASYKGFRFDIGGHRFFSKSQEIEDLWSEVLGARLLER
GRLSRIFYRNRFFDYPIRPLNALANLGPATAALCVASYLKARVLPPREVRSFEDWTVRSFGRTLYEIFFKTYTEKVWGMP
CSEISADWAAQRIKGLSMASLMRSMFLPKPKGRGAVIKTLIDRFRYPGRGPGEMWETVARIVTGRGHRLVFEAAVERIER
ASAGLLRVWTADGRSYAGSDFLSTMPLRELVNALDPPAPSAVQTAARALGYRDFLTVALIVDQTQVFPDNWIYIHDPTVK
MGRIQNFKNWSPEMVPDARYTCLGLEYFCFEGDGLWSAPDSELVALGCAELAKLGLVDPAKVVDGTVVRQAKAYPVYDDH
YRENVEAIRAFLEREAPNLQLIGRNGMHRYNNQDHAMMTGLLAARNIAAGGQYNLWAVNADAQYQEEIREGELDGGGRLV
PERLKT

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990307, Length=492, Percent_Identity=24.390243902439, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 54399; Mature: 54268

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKQVIVIGAGPAGLTAAYELSRLGVAATILERSAHVGGISRTASYKGFRFDIGGHRFF
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHH
SKSQEIEDLWSEVLGARLLERGRLSRIFYRNRFFDYPIRPLNALANLGPATAALCVASYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
KARVLPPREVRSFEDWTVRSFGRTLYEIFFKTYTEKVWGMPCSEISADWAAQRIKGLSMA
HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
SLMRSMFLPKPKGRGAVIKTLIDRFRYPGRGPGEMWETVARIVTGRGHRLVFEAAVERIE
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
RASAGLLRVWTADGRSYAGSDFLSTMPLRELVNALDPPAPSAVQTAARALGYRDFLTVAL
HHCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHH
IVDQTQVFPDNWIYIHDPTVKMGRIQNFKNWSPEMVPDARYTCLGLEYFCFEGDGLWSAP
EEHHHEECCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
DSELVALGCAELAKLGLVDPAKVVDGTVVRQAKAYPVYDDHYRENVEAIRAFLEREAPNL
CCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
QLIGRNGMHRYNNQDHAMMTGLLAARNIAAGGQYNLWAVNADAQYQEEIREGELDGGGRL
EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCC
VPERLKT
CHHHHCC
>Mature Secondary Structure 
AEKQVIVIGAGPAGLTAAYELSRLGVAATILERSAHVGGISRTASYKGFRFDIGGHRFF
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHH
SKSQEIEDLWSEVLGARLLERGRLSRIFYRNRFFDYPIRPLNALANLGPATAALCVASYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
KARVLPPREVRSFEDWTVRSFGRTLYEIFFKTYTEKVWGMPCSEISADWAAQRIKGLSMA
HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
SLMRSMFLPKPKGRGAVIKTLIDRFRYPGRGPGEMWETVARIVTGRGHRLVFEAAVERIE
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
RASAGLLRVWTADGRSYAGSDFLSTMPLRELVNALDPPAPSAVQTAARALGYRDFLTVAL
HHCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHH
IVDQTQVFPDNWIYIHDPTVKMGRIQNFKNWSPEMVPDARYTCLGLEYFCFEGDGLWSAP
EEHHHEECCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
DSELVALGCAELAKLGLVDPAKVVDGTVVRQAKAYPVYDDHYRENVEAIRAFLEREAPNL
CCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
QLIGRNGMHRYNNQDHAMMTGLLAARNIAAGGQYNLWAVNADAQYQEEIREGELDGGGRL
EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCC
VPERLKT
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA