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The map label for this gene is yqgF [C]

Identifier: 37520701

GI number: 37520701

Start: 1211705

End: 1212175

Strand: Reverse

Name: yqgF [C]

Synonym: gll1132

Alternate gene names: 37520701

Gene position: 1212175-1211705 (Counterclockwise)

Preceding gene: 37520702

Following gene: 37520700

Centisome position: 26.02

GC content: 63.91

Gene sequence:

>471_bases
ATGCGGGTGGTTTCGGTATTGGGGCTGGACGTGGGCAGCAAGCGCATCGGTGTAGCCGGCTGCGATCCCACCGGCCTGAT
CGCCAGCGGACTTGAAACCATCGTGCGCTGCAACCTGGGCGCGGACCTCGACGCGATTCGCCATTGGATCGAGCGCCGCC
GCGCCCAAGCCGTGGTCATCGGCCTGCCGCGCAATATGAACGGTTCCCTTGGCCCCCAGGCTCACCGCATCCAGCACTTC
GGCCAGCAACTGGCCCGGGTGATCGATGTGCCGATCGATTATGTAGACGAGCGTCTGTCCACCGTGCAGGCCGGACGGGC
GCTCCAGTCGGTTTCCGCCACCCGGCGCAAAGCCCTCATCGATCAGCAGGCCGCCGCGATCATCCTTCAGCAGTGGCTCG
ACATCCGCCGCTGCCAACACCGTCCTACGCAGGAATCCTTAGATGAGCGACACATTGACACTGAAAGATGA

Upstream 100 bases:

>100_bases
GGTGGTGGAGGCGTTCAACCACCGCGGCCTCTACCCGTAAAGGCCGTTGCCCTGCGGGGGGTGCCCTTTCTGCTAAAGTT
GGAAGGGCAAAATCGCGGGG

Downstream 100 bases:

>100_bases
AGCCGGCCGCACGCTAGCCTGCGAGCTGGTGACCGAACTGGAGATCGACGGTTCCCAGTACGGGCTGGTCGTGCCCCAGG
CGACGCCGGTGCGGCTGATG

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRVVSVLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVIGLPRNMNGSLGPQAHRIQHF
GQQLARVIDVPIDYVDERLSTVQAGRALQSVSATRRKALIDQQAAAIILQQWLDIRRCQHRPTQESLDERHIDTER

Sequences:

>Translated_156_residues
MRVVSVLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVIGLPRNMNGSLGPQAHRIQHF
GQQLARVIDVPIDYVDERLSTVQAGRALQSVSATRRKALIDQQAAAIILQQWLDIRRCQHRPTQESLDERHIDTER
>Mature_156_residues
MRVVSVLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVIGLPRNMNGSLGPQAHRIQHF
GQQLARVIDVPIDYVDERLSTVQAGRALQSVSATRRKALIDQQAAAIILQQWLDIRRCQHRPTQESLDERHIDTER

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_GLOVI (Q7NLJ1)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_924078.1
- ProteinModelPortal:   Q7NLJ1
- SMR:   Q7NLJ1
- GeneID:   2598999
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:gll1132
- NMPDR:   fig|251221.1.peg.1132
- HOGENOM:   HBG607919
- OMA:   VLILQNY
- ProtClustDB:   PRK00109
- BioCyc:   GVIO251221:GLL1132-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 17341; Mature: 17341

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVSVLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVI
CCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEE
GLPRNMNGSLGPQAHRIQHFGQQLARVIDVPIDYVDERLSTVQAGRALQSVSATRRKALI
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQQAAAIILQQWLDIRRCQHRPTQESLDERHIDTER
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MRVVSVLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVI
CCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEE
GLPRNMNGSLGPQAHRIQHFGQQLARVIDVPIDYVDERLSTVQAGRALQSVSATRRKALI
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQQAAAIILQQWLDIRRCQHRPTQESLDERHIDTER
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292