| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yrrL [H]
Identifier: 37520699
GI number: 37520699
Start: 1210144
End: 1211181
Strand: Reverse
Name: yrrL [H]
Synonym: gll1130
Alternate gene names: 37520699
Gene position: 1211181-1210144 (Counterclockwise)
Preceding gene: 37520700
Following gene: 37520698
Centisome position: 26.0
GC content: 68.88
Gene sequence:
>1038_bases ATGAGAGGCCGGGGCACCTGGTGGCGGGTACTGCCGGTGCTGGTGGTCTTGGCGCTCGGGGCCGGTGGGTTGTGGGTAAA TTCGCCGCCGCCCACCGCCAAAGCCGTGCGCGTCGTGCTGCCCACCGGCAGCGGCAGTCTGCGCATCGGCCAGAATCTGG CCGATGCCGGGGCGATCCGCTCCGCCTGGGCCTGGCTGGCACTGGTCTGGGTGCGCGGCTGGCAAAACGACCTCAAAGCC GGCACCTACGAAATTCCCCCGGGCCGCTCGCTTATCGCGGTGGCCGATCAGGTGCGCCGCGGCGAGACGCTGCGCTTTCG CTATCGGATCATCGAAGGCTGGAACCTGGCTCAGATGGCCAGCTACTTCGAGCAGTTGGGTTACTTTCGCACCCGGGAGT TTCTCGCACTCACCAGCGGGCCTGGCATGATCCGCCCCGCCTGGCTGCCCGAGGGTCTCGACCGCCTCGAAGGTTTCTTG TTTCCGAGTACCTACGAGCTTCCCGCCGAGACCCTCGGGGCGCGCGCCGCCGTGAACCAGATGCTTTCGACCTTCGAGAA GACCGCCCTGCCGCTGTGGCGCGCCCGGGTCAAACCGGCCCGGTCGCTCAAGGACTGGGTGGCGCTTGCGAGCTTGATCG AAAAAGAAGCGGCCGTCGGTGAGGAGCGCGCCACGATCGCCGGGGTCTTCGCCAACCGCCTACGCCTCGGCATGCCCCTC GCCTCCGACCCAACCGTCGAGTACGCCTTCGGCATCCGTCAGACCGCCGATACCCCCCTCACCTACGCCCAGGTGCTTAA GCCCTCGCCCTACAACACCTATATCAACCCCGGTCTGCCCCCGACGCCCATCGCCTCGCCGGGGCTCGCGAGCCTCGAAG CCGCCCTGGCACCGGCGCTCACGCCGTATCTGTATTTCGTCGCCCGCTACGACGGCACCCACGTCTTCAGCCGCACCGAG GCCGAGCACGAGCAGGCCAAGCGCCAAATCCGCGCCGAGCGGCGGGCGGGGGCCGGAGCCGCCCCCCAGGCCCGCTAG
Upstream 100 bases:
>100_bases CGAATTGCCCGAGGGCGGCGAGCCGCGGGTGCTGGAGCCCGAGGAGACCGCGCGCTTGATGCCCAACTTCGAGGAGGCCC TGCTCGATCTGGCCGAGTAG
Downstream 100 bases:
>100_bases CTGGTAAACTCGGAGAAGTCTAAAGCGCACCATGCTTGGAAAGAACCTGTTCAAACCCGATTTGATCGTGGCCGGTCCGG TATCGGATTTGAGCTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MRGRGTWWRVLPVLVVLALGAGGLWVNSPPPTAKAVRVVLPTGSGSLRIGQNLADAGAIRSAWAWLALVWVRGWQNDLKA GTYEIPPGRSLIAVADQVRRGETLRFRYRIIEGWNLAQMASYFEQLGYFRTREFLALTSGPGMIRPAWLPEGLDRLEGFL FPSTYELPAETLGARAAVNQMLSTFEKTALPLWRARVKPARSLKDWVALASLIEKEAAVGEERATIAGVFANRLRLGMPL ASDPTVEYAFGIRQTADTPLTYAQVLKPSPYNTYINPGLPPTPIASPGLASLEAALAPALTPYLYFVARYDGTHVFSRTE AEHEQAKRQIRAERRAGAGAAPQAR
Sequences:
>Translated_345_residues MRGRGTWWRVLPVLVVLALGAGGLWVNSPPPTAKAVRVVLPTGSGSLRIGQNLADAGAIRSAWAWLALVWVRGWQNDLKA GTYEIPPGRSLIAVADQVRRGETLRFRYRIIEGWNLAQMASYFEQLGYFRTREFLALTSGPGMIRPAWLPEGLDRLEGFL FPSTYELPAETLGARAAVNQMLSTFEKTALPLWRARVKPARSLKDWVALASLIEKEAAVGEERATIAGVFANRLRLGMPL ASDPTVEYAFGIRQTADTPLTYAQVLKPSPYNTYINPGLPPTPIASPGLASLEAALAPALTPYLYFVARYDGTHVFSRTE AEHEQAKRQIRAERRAGAGAAPQAR >Mature_345_residues MRGRGTWWRVLPVLVVLALGAGGLWVNSPPPTAKAVRVVLPTGSGSLRIGQNLADAGAIRSAWAWLALVWVRGWQNDLKA GTYEIPPGRSLIAVADQVRRGETLRFRYRIIEGWNLAQMASYFEQLGYFRTREFLALTSGPGMIRPAWLPEGLDRLEGFL FPSTYELPAETLGARAAVNQMLSTFEKTALPLWRARVKPARSLKDWVALASLIEKEAAVGEERATIAGVFANRLRLGMPL ASDPTVEYAFGIRQTADTPLTYAQVLKPSPYNTYINPGLPPTPIASPGLASLEAALAPALTPYLYFVARYDGTHVFSRTE AEHEQAKRQIRAERRAGAGAAPQAR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=294, Percent_Identity=32.6530612244898, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37849; Mature: 37849
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRGTWWRVLPVLVVLALGAGGLWVNSPPPTAKAVRVVLPTGSGSLRIGQNLADAGAIR CCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEECCCCCEEECCCHHHHHHHH SAWAWLALVWVRGWQNDLKAGTYEIPPGRSLIAVADQVRRGETLRFRYRIIEGWNLAQMA HHHHHHHHHHHHCCHHHHCCCCEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHH SYFEQLGYFRTREFLALTSGPGMIRPAWLPEGLDRLEGFLFPSTYELPAETLGARAAVNQ HHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH MLSTFEKTALPLWRARVKPARSLKDWVALASLIEKEAAVGEERATIAGVFANRLRLGMPL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC ASDPTVEYAFGIRQTADTPLTYAQVLKPSPYNTYINPGLPPTPIASPGLASLEAALAPAL CCCCCCHHHHCCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TPYLYFVARYDGTHVFSRTEAEHEQAKRQIRAERRAGAGAAPQAR HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRGRGTWWRVLPVLVVLALGAGGLWVNSPPPTAKAVRVVLPTGSGSLRIGQNLADAGAIR CCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEECCCCCEEECCCHHHHHHHH SAWAWLALVWVRGWQNDLKAGTYEIPPGRSLIAVADQVRRGETLRFRYRIIEGWNLAQMA HHHHHHHHHHHHCCHHHHCCCCEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHH SYFEQLGYFRTREFLALTSGPGMIRPAWLPEGLDRLEGFLFPSTYELPAETLGARAAVNQ HHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH MLSTFEKTALPLWRARVKPARSLKDWVALASLIEKEAAVGEERATIAGVFANRLRLGMPL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC ASDPTVEYAFGIRQTADTPLTYAQVLKPSPYNTYINPGLPPTPIASPGLASLEAALAPAL CCCCCCHHHHCCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TPYLYFVARYDGTHVFSRTEAEHEQAKRQIRAERRAGAGAAPQAR HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]