| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37520664
Identifier: 37520664
GI number: 37520664
Start: 1174356
End: 1175195
Strand: Reverse
Name: 37520664
Synonym: gll1095
Alternate gene names: NA
Gene position: 1175195-1174356 (Counterclockwise)
Preceding gene: 37520674
Following gene: 37520663
Centisome position: 25.22
GC content: 64.05
Gene sequence:
>840_bases ATGGCGCCGAAGGAAAGGATACCTGTGCAGAAGTTGCCCTGTAAGACCCCATATCACCCGTCGGCAAACGCGGCCGACCC GAGTGAAACGCTGCTGCCACTGCGCATCTACGCCCTGGGTACGGCTTCGGTGTACCGGGGCGAGTACGCCCTGACGGCTG CCGACTGGACCTACGCCAGGCCCCGGGAGCTGTTTTTCTGCCTGCTGCTGCGCCGCTTTGCCACCAAGGAGCAACTCGGC CTGGCGCTGTGGCCCGACGCCTCGGCGCTGCAGTTGCGCCGCAGTTTTCATACCACATTGCACCATCTGCGCCGCGCCCT CGGCCCGTCGGACTGGATCGTCTACGAACACCAGCGCTATACCTTCAATCGCCGCTTACCCTACTGGTTCGACGTCGAGG AGTTCGAGGCTCACTTTGCCGAGGGGAAGCGGCTGGAAAGCTCTGCCCCCGAGCGGGCCATCGCCTGCTTCGAGGCGGCC GCGGGCCTTTACGAGGGCGAATTGCTCGAAGGGATGATCCAGAGCGAATGGTGCCTGCAGAGGCGGGAGGAACTGCACAG GCGGTTTGTGGAGGCGCTGTTTGCCCTGGGACAACTGTTGAGCACCATCGGGCGGAGTTTGCAAGCCGCCGACGTCTACC TGCGCATCGTCTCTTGCGACAATCTGCTGGAGCGCGCCCACCGCGAACTGATGCGCTGTTACGCCTGCCTGGGAGAGACG GGTCTAGCGCTGCGGCAGTACCAGACCCTGGTGCACCTGTTGCGCCGAGAGTTGGACTCCCCGCCGGCTGCTGAGACAAC CCGCCTTTTCGAAGAGCTGCGCCGGGGCGAGAATCTCTAA
Upstream 100 bases:
>100_bases CGATCAATTCATCGACGTTTGTCGCGTTGTTGGGCAGAGAGGAGTTCTACCTCGTAACTCCTACCTTGCCTCGCGTGGGG TTTGACGATTCGCACGGCGC
Downstream 100 bases:
>100_bases AAACAAGGTCACCGACCCATCTGCAAAGTTTGTAGGAAAGTTTTTTACATTTAAGCGCTTCTGATAGCGCTTAAATGAGT GAGAGTGATTGTGCAATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Activator Domain Protein; SARP Family Transcriptional Regulator; Response Regulator Receiver/SARP Domain-Containing Protein; Adenylate/Guanylate Cyclase; TPR Repeat-Containing Protein; Transcriptional Activator; Transcriptional Regulator SARP Family; Adenylate Cyclase
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAPKERIPVQKLPCKTPYHPSANAADPSETLLPLRIYALGTASVYRGEYALTAADWTYARPRELFFCLLLRRFATKEQLG LALWPDASALQLRRSFHTTLHHLRRALGPSDWIVYEHQRYTFNRRLPYWFDVEEFEAHFAEGKRLESSAPERAIACFEAA AGLYEGELLEGMIQSEWCLQRREELHRRFVEALFALGQLLSTIGRSLQAADVYLRIVSCDNLLERAHRELMRCYACLGET GLALRQYQTLVHLLRRELDSPPAAETTRLFEELRRGENL
Sequences:
>Translated_279_residues MAPKERIPVQKLPCKTPYHPSANAADPSETLLPLRIYALGTASVYRGEYALTAADWTYARPRELFFCLLLRRFATKEQLG LALWPDASALQLRRSFHTTLHHLRRALGPSDWIVYEHQRYTFNRRLPYWFDVEEFEAHFAEGKRLESSAPERAIACFEAA AGLYEGELLEGMIQSEWCLQRREELHRRFVEALFALGQLLSTIGRSLQAADVYLRIVSCDNLLERAHRELMRCYACLGET GLALRQYQTLVHLLRRELDSPPAAETTRLFEELRRGENL >Mature_278_residues APKERIPVQKLPCKTPYHPSANAADPSETLLPLRIYALGTASVYRGEYALTAADWTYARPRELFFCLLLRRFATKEQLGL ALWPDASALQLRRSFHTTLHHLRRALGPSDWIVYEHQRYTFNRRLPYWFDVEEFEAHFAEGKRLESSAPERAIACFEAAA GLYEGELLEGMIQSEWCLQRREELHRRFVEALFALGQLLSTIGRSLQAADVYLRIVSCDNLLERAHRELMRCYACLGETG LALRQYQTLVHLLRRELDSPPAAETTRLFEELRRGENL
Specific function: Unknown
COG id: COG3629
COG function: function code T; DNA-binding transcriptional activator of the SARP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32267; Mature: 32136
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKERIPVQKLPCKTPYHPSANAADPSETLLPLRIYALGTASVYRGEYALTAADWTYAR CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEECHHHHHCCCEEEEECCCCCCC PRELFFCLLLRRFATKEQLGLALWPDASALQLRRSFHTTLHHLRRALGPSDWIVYEHQRY HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH TFNRRLPYWFDVEEFEAHFAEGKRLESSAPERAIACFEAAAGLYEGELLEGMIQSEWCLQ EECCCCCCEECHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RREELHRRFVEALFALGQLLSTIGRSLQAADVYLRIVSCDNLLERAHRELMRCYACLGET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLALRQYQTLVHLLRRELDSPPAAETTRLFEELRRGENL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure APKERIPVQKLPCKTPYHPSANAADPSETLLPLRIYALGTASVYRGEYALTAADWTYAR CCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEECHHHHHCCCEEEEECCCCCCC PRELFFCLLLRRFATKEQLGLALWPDASALQLRRSFHTTLHHLRRALGPSDWIVYEHQRY HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH TFNRRLPYWFDVEEFEAHFAEGKRLESSAPERAIACFEAAAGLYEGELLEGMIQSEWCLQ EECCCCCCEECHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RREELHRRFVEALFALGQLLSTIGRSLQAADVYLRIVSCDNLLERAHRELMRCYACLGET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLALRQYQTLVHLLRRELDSPPAAETTRLFEELRRGENL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA