| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yjhP [C]
Identifier: 37520580
GI number: 37520580
Start: 1082736
End: 1083590
Strand: Direct
Name: yjhP [C]
Synonym: glr1011
Alternate gene names: 37520580
Gene position: 1082736-1083590 (Clockwise)
Preceding gene: 37520579
Following gene: 37520585
Centisome position: 23.24
GC content: 60.7
Gene sequence:
>855_bases ATGTCTTTGTTTCGACGCCGCACCTTGTTGCTTAGCAGCCTGGGTCTCTGGCCGGCCGGCCGGCTGCCGGCCCAACCGGG AGGCAATCTGGTCGTTCCCTACGTGCCCACGGCGGATGTGGTCGTGGCAGCAATGCTCAAGCTCGCCCGCGTGGGCAAAG ACGACTATTTGATCGATCTCGGTTGCGGCGACGGGCGGATCGTCGTCACCGCCGCCCGCGAGCACGGCACGCGGGGTCTT GGAGTGGACATTGCTCCCGAACTGGTGGAACTGAGCCGCACCAACGCCCGGCGGGCCGGTGTCGATGAACGGGTACGCTT TGCTGAGCAAGATCTTTTCCAGACCGACCTGCGCCCGGCCTCGGTCGTGACGCTGTATTTGTTTCCTGAGATCAACCTGA AGCTCAGGCCCAAGCTCTTTGCCGAACTCAAGCCCGGATCCCGCGTGGTCTCCAACGAATGGGACATGGGCGAGTGGCAA CCGGACGAGACCCTCAAAGTGCAGGCGCCGGACCGTGCCTATCAGATCTTCGCCTGGACAATCCCTGCCGAAGCCCAGGG AGTTTGGGAGGGCAGTGTTTCTGCGGGCGGTCCCCCGCGCAGTTACCGGCTCGTGCTGCGCCAACGCTTCCAAGTAGTAA GCGGTATCCTGCTTGTCGAGGGTAGGGAGCATCTATTGAGCGATGCACGCTTGGAGGGCGACCGTCTGCGCTTTATTGCC CCGGCCGTAGGTTTGCGATTTGTTGGAGAGGTGTCAGGCAACAGACTCATGGGAAATTTCAATGAAGGACCGACTGAAAA AGGCCCAGTCTGCGACTTCCAGCAGACCAGGCGATTTAATGAAGTATGGTTCTAA
Upstream 100 bases:
>100_bases CCCGGCGACTGCGAGAATTGGGACTGGAACCCTAGCCGCCCGGCGCACTAAAGCCTGACAAGGCTCCTGCGACGATCTGG CGGCTTCTATCGGTCGCACT
Downstream 100 bases:
>100_bases TCCAACCGGTAGTTTTCAAGGCGCCAATTTAAGAATGAAGTGCAACGGCTGAGAACTAGCGGGAGCCGGCCTCCGTAACA TCAGCCGGATGTTCGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Histone Methylation DOT1 Family Protein; Methyltransferase; Methyltransferase Type; Ribosomal Methyltransferase; rRNA Methylase Family Protein; RNA Methylase Family UPF; SAM-Dependent Methyltransferase; Cyclopropane Fatty Acid Synthase-Like Protein; Ribosomal Methylase-Like Protein; RNA Methylase Family; Methylase
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSLFRRRTLLLSSLGLWPAGRLPAQPGGNLVVPYVPTADVVVAAMLKLARVGKDDYLIDLGCGDGRIVVTAAREHGTRGL GVDIAPELVELSRTNARRAGVDERVRFAEQDLFQTDLRPASVVTLYLFPEINLKLRPKLFAELKPGSRVVSNEWDMGEWQ PDETLKVQAPDRAYQIFAWTIPAEAQGVWEGSVSAGGPPRSYRLVLRQRFQVVSGILLVEGREHLLSDARLEGDRLRFIA PAVGLRFVGEVSGNRLMGNFNEGPTEKGPVCDFQQTRRFNEVWF
Sequences:
>Translated_284_residues MSLFRRRTLLLSSLGLWPAGRLPAQPGGNLVVPYVPTADVVVAAMLKLARVGKDDYLIDLGCGDGRIVVTAAREHGTRGL GVDIAPELVELSRTNARRAGVDERVRFAEQDLFQTDLRPASVVTLYLFPEINLKLRPKLFAELKPGSRVVSNEWDMGEWQ PDETLKVQAPDRAYQIFAWTIPAEAQGVWEGSVSAGGPPRSYRLVLRQRFQVVSGILLVEGREHLLSDARLEGDRLRFIA PAVGLRFVGEVSGNRLMGNFNEGPTEKGPVCDFQQTRRFNEVWF >Mature_283_residues SLFRRRTLLLSSLGLWPAGRLPAQPGGNLVVPYVPTADVVVAAMLKLARVGKDDYLIDLGCGDGRIVVTAAREHGTRGLG VDIAPELVELSRTNARRAGVDERVRFAEQDLFQTDLRPASVVTLYLFPEINLKLRPKLFAELKPGSRVVSNEWDMGEWQP DETLKVQAPDRAYQIFAWTIPAEAQGVWEGSVSAGGPPRSYRLVLRQRFQVVSGILLVEGREHLLSDARLEGDRLRFIAP AVGLRFVGEVSGNRLMGNFNEGPTEKGPVCDFQQTRRFNEVWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13027600, Length=157, Percent_Identity=36.3057324840764, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI154240720, Length=135, Percent_Identity=32.5925925925926, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI24648672, Length=123, Percent_Identity=32.520325203252, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31594; Mature: 31462
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFRRRTLLLSSLGLWPAGRLPAQPGGNLVVPYVPTADVVVAAMLKLARVGKDDYLIDL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE GCGDGRIVVTAAREHGTRGLGVDIAPELVELSRTNARRAGVDERVRFAEQDLFQTDLRPA ECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCC SVVTLYLFPEINLKLRPKLFAELKPGSRVVSNEWDMGEWQPDETLKVQAPDRAYQIFAWT EEEEEEEECCCCEEECCCEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEE IPAEAQGVWEGSVSAGGPPRSYRLVLRQRFQVVSGILLVEGREHLLSDARLEGDRLRFIA CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHCCCCCCEEEEEE PAVGLRFVGEVSGNRLMGNFNEGPTEKGPVCDFQQTRRFNEVWF HHHHHEEEEECCCCEEEECCCCCCCCCCCCCCHHHHCCHHHCCC >Mature Secondary Structure SLFRRRTLLLSSLGLWPAGRLPAQPGGNLVVPYVPTADVVVAAMLKLARVGKDDYLIDL CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE GCGDGRIVVTAAREHGTRGLGVDIAPELVELSRTNARRAGVDERVRFAEQDLFQTDLRPA ECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCC SVVTLYLFPEINLKLRPKLFAELKPGSRVVSNEWDMGEWQPDETLKVQAPDRAYQIFAWT EEEEEEEECCCCEEECCCEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEE IPAEAQGVWEGSVSAGGPPRSYRLVLRQRFQVVSGILLVEGREHLLSDARLEGDRLRFIA CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHCCCCCCEEEEEE PAVGLRFVGEVSGNRLMGNFNEGPTEKGPVCDFQQTRRFNEVWF HHHHHEEEEECCCCEEEECCCCCCCCCCCCCCHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA