| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520553
Identifier: 37520553
GI number: 37520553
Start: 1048615
End: 1050285
Strand: Direct
Name: 37520553
Synonym: glr0984
Alternate gene names: NA
Gene position: 1048615-1050285 (Clockwise)
Preceding gene: 37520552
Following gene: 37520554
Centisome position: 22.51
GC content: 62.9
Gene sequence:
>1671_bases ATGGAAACAACGGTACTGTCGCTGTGGACTCGTGATCGAAAGGTTCCCCGGTGTGCGCCGCGCCGTTGGCGGGGGTGGTT GAGCTTCTCGTTGGGGGTGTGGTGGTGCGTGGTTTCCCTGGCGCCAGTAGGGGCGCAGGCACTGCTGAGGGCGGTGGAGA CCCCGGTGGGTGGGGGCCTGGGTTTTGTCATCAACGGCAGCAACAACTACGATCGCTCCGGCACTTCTGTCAGCGGGGCG GGGGACGTCAACGGCGACGGGCTGGATGATGTGATTGTCGGGGCTTCCAGTGCCTCCCCGGACGGACGGTACGCAGCCGG TCGCAGCTACGTGGTCTTCGGCAAGCGGGGCGGCCAACCAGCCGAATTGTCCACCCTTGAAAATGGCACGAGCCGGGACG GCTTTGTCATCAACGGCAGCAATAACTACGATGGCTCCGGGTATTCTGTCGACGGGGCGGGAGACGTCAACGGCGACGGG CTGGATGATGTGATTGTCGGGGCTCCCGGTGCCGACCCGGACAGTCGGTACGCAGCTGGCCGCAGCTACGTGGTCTTCGG CAAGCGGGGCGGCCAACCGGTCGAGTTGGCCACCCTCGAAAGCGGCACGAGTCGCAACGGCTTTGTGATTAACGGCAGCA ATGACTACGATAGCGCCGGCATTGCTGTCAGCGGAGTGGGGGACGTCAACGGCGACGGGCTGGATGATGTGATTGTCGGG GCTCCCGGTGCCGACCCGGACAGTCGGTACGCAGCTGGCCGCAGCTACGTGGTCTTCGGCAAGCGGGGCGGCCAACCGGT CGAGTTGGCCACCCTCGAAAGCGGCACGAGTCGCAACGGCTTTGTGATTAACGGCAGCATTGAAAACTTTCTCTCCGGCG TTGCTGTCAGCGGGGCGGGGGACGTCAACGGCGACGGACTCGATGACCTGATCGTCGGGACCGACCCGGACGGTCGGTAC AATACCGAACACAGCTACGTGGTGTTCGGCAAGCGCAACGGCAGACCTGTGGAGTTGTCGGCGCTCGAAAGCGGCAACAG CCGGACGGGCTTTGTCATCAATGGCATTTACTTTGCTGAATCCGGCGAATCTGTGGGCGGAGCGGGGGACGTCAACGGCG ACGGATTGGACGATGTGATCGTCGGGGCTCCCGTTGCCACCCCGCCTGATGGCTACTTTTCTGGCCAAAGCTACGTAGTG TTCGGCAAGCGCAACAGCCAACCGGTCGAACTGACAGACATCGGAAGAGGCACCGGTCGGGACGGCTTTGTCATCAACGG CAGCAATGACTACGATAGCGCCGGCCGATCTGTGGGCGGAGCGGGGGACGTCAACGGCGACGGATTGGACGATGTGCTCG TCTATGCTCCCTTTGCCTACCCGTACGGTCGCAGCTATGTGGTCTTTGGTAAGCGCAGTACCCAACCGGTTGAATTGTCC ACACTGGAAAGTGGCACCGGCCGCGACGGCTTTGTCATCAACGGTAGCAACAACTCTTTCAGCGGGGCAGAGGACGTCAA CGGCGACGGCCTGGATGATGTGATTGTCGGGGTTTCCAGTGCCTCCCCGGACGGACGGTACGCAGCCGGCCGCAGCTACG TCGTGTTTGGCAAGCGCAACAGCCAACCGGTCGAACTGGCGGACTTGGAAGCCGCCGGGCAACTCCCTTGA
Upstream 100 bases:
>100_bases GGCTATCCGTTAGAGCTGATCGATCTTCGAAATACTGCTTTTTCTCCTGGCGTCGGCTACTGTAAGGCGTGACCTTGCCA ACGAAAGCGAGAAATAAGAA
Downstream 100 bases:
>100_bases ATAGGGAAAGTTGACGGATAGGAGTGCGTTTGTCCATGAATTGCCGCCATGAACAACCCTCTCAGTTAGAGCAGGTGCCA GGTGTGAGGAGAATGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: FG-GAP Repeat-Containing Protein; FG-GAP Repeat Protein; Integrins Alpha Chain; Outer Membrane Adhesin Like Proteiin; Integrin Alpha- And Beta4- Subunit; Phosphoribosyl-ATP Pyrophosphohydrolase; Ig Domain Family; Integrin Alpha Beta-Propellor Repeat Protein; Type I Secretion Target Repeat-Containing Protein; Ig Family Protein
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues METTVLSLWTRDRKVPRCAPRRWRGWLSFSLGVWWCVVSLAPVGAQALLRAVETPVGGGLGFVINGSNNYDRSGTSVSGA GDVNGDGLDDVIVGASSASPDGRYAAGRSYVVFGKRGGQPAELSTLENGTSRDGFVINGSNNYDGSGYSVDGAGDVNGDG LDDVIVGAPGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSNDYDSAGIAVSGVGDVNGDGLDDVIVG APGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSIENFLSGVAVSGAGDVNGDGLDDLIVGTDPDGRY NTEHSYVVFGKRNGRPVELSALESGNSRTGFVINGIYFAESGESVGGAGDVNGDGLDDVIVGAPVATPPDGYFSGQSYVV FGKRNSQPVELTDIGRGTGRDGFVINGSNDYDSAGRSVGGAGDVNGDGLDDVLVYAPFAYPYGRSYVVFGKRSTQPVELS TLESGTGRDGFVINGSNNSFSGAEDVNGDGLDDVIVGVSSASPDGRYAAGRSYVVFGKRNSQPVELADLEAAGQLP
Sequences:
>Translated_556_residues METTVLSLWTRDRKVPRCAPRRWRGWLSFSLGVWWCVVSLAPVGAQALLRAVETPVGGGLGFVINGSNNYDRSGTSVSGA GDVNGDGLDDVIVGASSASPDGRYAAGRSYVVFGKRGGQPAELSTLENGTSRDGFVINGSNNYDGSGYSVDGAGDVNGDG LDDVIVGAPGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSNDYDSAGIAVSGVGDVNGDGLDDVIVG APGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSIENFLSGVAVSGAGDVNGDGLDDLIVGTDPDGRY NTEHSYVVFGKRNGRPVELSALESGNSRTGFVINGIYFAESGESVGGAGDVNGDGLDDVIVGAPVATPPDGYFSGQSYVV FGKRNSQPVELTDIGRGTGRDGFVINGSNDYDSAGRSVGGAGDVNGDGLDDVLVYAPFAYPYGRSYVVFGKRSTQPVELS TLESGTGRDGFVINGSNNSFSGAEDVNGDGLDDVIVGVSSASPDGRYAAGRSYVVFGKRNSQPVELADLEAAGQLP >Mature_556_residues METTVLSLWTRDRKVPRCAPRRWRGWLSFSLGVWWCVVSLAPVGAQALLRAVETPVGGGLGFVINGSNNYDRSGTSVSGA GDVNGDGLDDVIVGASSASPDGRYAAGRSYVVFGKRGGQPAELSTLENGTSRDGFVINGSNNYDGSGYSVDGAGDVNGDG LDDVIVGAPGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSNDYDSAGIAVSGVGDVNGDGLDDVIVG APGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSIENFLSGVAVSGAGDVNGDGLDDLIVGTDPDGRY NTEHSYVVFGKRNGRPVELSALESGNSRTGFVINGIYFAESGESVGGAGDVNGDGLDDVIVGAPVATPPDGYFSGQSYVV FGKRNSQPVELTDIGRGTGRDGFVINGSNDYDSAGRSVGGAGDVNGDGLDDVLVYAPFAYPYGRSYVVFGKRSTQPVELS TLESGTGRDGFVINGSNNSFSGAEDVNGDGLDDVIVGVSSASPDGRYAAGRSYVVFGKRNSQPVELADLEAAGQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57027; Mature: 57027
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTVLSLWTRDRKVPRCAPRRWRGWLSFSLGVWWCVVSLAPVGAQALLRAVETPVGGGL CCCEEEEEECCCCCCCCCCCHHHCCEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCE GFVINGSNNYDRSGTSVSGAGDVNGDGLDDVIVGASSASPDGRYAAGRSYVVFGKRGGQP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCEEEEEECCCCCC AELSTLENGTSRDGFVINGSNNYDGSGYSVDGAGDVNGDGLDDVIVGAPGADPDSRYAAG CEEEECCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHCC RSYVVFGKRGGQPVELATLESGTSRNGFVINGSNDYDSAGIAVSGVGDVNGDGLDDVIVG CEEEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEE APGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSIENFLSGVAVSGAG CCCCCCCCHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEECCHHHHHCCEEEECCC DVNGDGLDDLIVGTDPDGRYNTEHSYVVFGKRNGRPVELSALESGNSRTGFVINGIYFAE CCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEEC SGESVGGAGDVNGDGLDDVIVGAPVATPPDGYFSGQSYVVFGKRNSQPVELTDIGRGTGR CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC DGFVINGSNDYDSAGRSVGGAGDVNGDGLDDVLVYAPFAYPYGRSYVVFGKRSTQPVELS CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEE TLESGTGRDGFVINGSNNSFSGAEDVNGDGLDDVIVGVSSASPDGRYAAGRSYVVFGKRN EECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEEECCC SQPVELADLEAAGQLP CCCEEEEECCCCCCCC >Mature Secondary Structure METTVLSLWTRDRKVPRCAPRRWRGWLSFSLGVWWCVVSLAPVGAQALLRAVETPVGGGL CCCEEEEEECCCCCCCCCCCHHHCCEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCE GFVINGSNNYDRSGTSVSGAGDVNGDGLDDVIVGASSASPDGRYAAGRSYVVFGKRGGQP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCEEEEEECCCCCC AELSTLENGTSRDGFVINGSNNYDGSGYSVDGAGDVNGDGLDDVIVGAPGADPDSRYAAG CEEEECCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHCC RSYVVFGKRGGQPVELATLESGTSRNGFVINGSNDYDSAGIAVSGVGDVNGDGLDDVIVG CEEEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEE APGADPDSRYAAGRSYVVFGKRGGQPVELATLESGTSRNGFVINGSIENFLSGVAVSGAG CCCCCCCCHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEECCHHHHHCCEEEECCC DVNGDGLDDLIVGTDPDGRYNTEHSYVVFGKRNGRPVELSALESGNSRTGFVINGIYFAE CCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEEC SGESVGGAGDVNGDGLDDVIVGAPVATPPDGYFSGQSYVVFGKRNSQPVELTDIGRGTGR CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC DGFVINGSNDYDSAGRSVGGAGDVNGDGLDDVLVYAPFAYPYGRSYVVFGKRSTQPVELS CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEE TLESGTGRDGFVINGSNNSFSGAEDVNGDGLDDVIVGVSSASPDGRYAAGRSYVVFGKRN EECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEEECCC SQPVELADLEAAGQLP CCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA