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The map label for this gene is nblB

Identifier: 37520550

GI number: 37520550

Start: 1043166

End: 1043867

Strand: Reverse

Name: nblB

Synonym: gvip128

Alternate gene names: NA

Gene position: 1043867-1043166 (Counterclockwise)

Preceding gene: 37520558

Following gene: 37520549

Centisome position: 22.41

GC content: 62.39

Gene sequence:

>702_bases
ATGACATCCTCTCTAGAAGAAGTAAAAGCCCAAATGGCCAGTGCCGACCCCGGCAAGCGCATGGCCGCCCTGGTTGCCCT
GCGTTTTTTCTCGGACGAAGAAGCGGTGCCGCTGCTGTTCCAGGCGGCTCTCGACCCGATTCCGCTGGTGCGCGTCTACG
CCGCCATCGGTTTGGGTAAGAAGAAGGGCGAAGGCAACTTCGACTTGCTCATCGACTTGCTCAACAACGACAAAGACGCC
TCGGTACGGGCGGAGGCGGCGGGCTCCCTGGGCTCGCTCGGGGACATACGGGCGGTGGAATACCTGTTGCGGGCTTATTA
CGAAGACATCGACTGGATCGTCCGTTACAGCGCGGTGGTCTCGCTGGGGCAGTTGCGCGACGAGCGAGGCTACCCGGTAC
TGCGCGACGCGATCGCAAGCGACACCGACATGATCCGCGATGCCGCCATCAGTGCACTGGGCGAACTGGGCAACGCCCGC
GCCCTCGACGTGCTGTTGCCATTGGTGCCCAATCCGGACCCCGAAGTGCGCCGCCGCATTGCTCAGGCGCTGGGTCTGAT
TGCCCTGCAGGCACGCGAGACCAATATCCAGGAGCCGAGCCGCGCACCTCTCGCCTATCTGGCCAAAGACGACGACGAGA
AAGTCGCCGAGTTCGCCCGTTACTATCTTGAACAACTGGACGGTAATACCCCCCACGAGTAG

Upstream 100 bases:

>100_bases
AAACTAGCTGATCGGCCGACGCTTCTGCAGTAGGAGAGATTGCCCCCTGGGTTCGGCACTGCTAGATTAAGAGATGTAAC
ATATTGGGGCCTTTGCGGCG

Downstream 100 bases:

>100_bases
AAAACCAGGGCCGCCGGTCACAACCGCTGCGATTGACTGGTGCCATCTACACGCCATTTTTTAGCCCTCTACCGGAGCTG
TAAACAAGGGGAATTCTGTG

Product: phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein; HEAT Repeat-Containing Protein; Heat Domain-Containing Protein

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTSSLEEVKAQMASADPGKRMAALVALRFFSDEEAVPLLFQAALDPIPLVRVYAAIGLGKKKGEGNFDLLIDLLNNDKDA
SVRAEAAGSLGSLGDIRAVEYLLRAYYEDIDWIVRYSAVVSLGQLRDERGYPVLRDAIASDTDMIRDAAISALGELGNAR
ALDVLLPLVPNPDPEVRRRIAQALGLIALQARETNIQEPSRAPLAYLAKDDDEKVAEFARYYLEQLDGNTPHE

Sequences:

>Translated_233_residues
MTSSLEEVKAQMASADPGKRMAALVALRFFSDEEAVPLLFQAALDPIPLVRVYAAIGLGKKKGEGNFDLLIDLLNNDKDA
SVRAEAAGSLGSLGDIRAVEYLLRAYYEDIDWIVRYSAVVSLGQLRDERGYPVLRDAIASDTDMIRDAAISALGELGNAR
ALDVLLPLVPNPDPEVRRRIAQALGLIALQARETNIQEPSRAPLAYLAKDDDEKVAEFARYYLEQLDGNTPHE
>Mature_232_residues
TSSLEEVKAQMASADPGKRMAALVALRFFSDEEAVPLLFQAALDPIPLVRVYAAIGLGKKKGEGNFDLLIDLLNNDKDAS
VRAEAAGSLGSLGDIRAVEYLLRAYYEDIDWIVRYSAVVSLGQLRDERGYPVLRDAIASDTDMIRDAAISALGELGNARA
LDVLLPLVPNPDPEVRRRIAQALGLIALQARETNIQEPSRAPLAYLAKDDDEKVAEFARYYLEQLDGNTPHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25511; Mature: 25380

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSLEEVKAQMASADPGKRMAALVALRFFSDEEAVPLLFQAALDPIPLVRVYAAIGLGK
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
KKGEGNFDLLIDLLNNDKDASVRAEAAGSLGSLGDIRAVEYLLRAYYEDIDWIVRYSAVV
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGQLRDERGYPVLRDAIASDTDMIRDAAISALGELGNARALDVLLPLVPNPDPEVRRRI
HHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
AQALGLIALQARETNIQEPSRAPLAYLAKDDDEKVAEFARYYLEQLDGNTPHE
HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSSLEEVKAQMASADPGKRMAALVALRFFSDEEAVPLLFQAALDPIPLVRVYAAIGLGK
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
KKGEGNFDLLIDLLNNDKDASVRAEAAGSLGSLGDIRAVEYLLRAYYEDIDWIVRYSAVV
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGQLRDERGYPVLRDAIASDTDMIRDAAISALGELGNARALDVLLPLVPNPDPEVRRRI
HHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
AQALGLIALQARETNIQEPSRAPLAYLAKDDDEKVAEFARYYLEQLDGNTPHE
HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA