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The map label for this gene is 37520547

Identifier: 37520547

GI number: 37520547

Start: 1038338

End: 1038718

Strand: Direct

Name: 37520547

Synonym: glr0978

Alternate gene names: NA

Gene position: 1038338-1038718 (Clockwise)

Preceding gene: 37520546

Following gene: 37520548

Centisome position: 22.29

GC content: 51.18

Gene sequence:

>381_bases
TTGACGCCAGAGCAACAAGATTTAATGGATCGTGCCGAACAGAGCCTGCAAGCTGCCCGAATATTGGCAGACGAAGCTCT
CTTCGATGTATCTGTGTCTCGTTCTTACTACGCTATGTTCTACTGTGCCCGAGCCAGCCTCCTCGCATTAAATTTGTCCA
GCAAGAGTCATAGCGGCACGATTTCATTGTTTGGTCAGCACCTCGCTGCTGCGGGACGGTTACCCATTGAGATTCACCGT
CAGCTAATAGACGCTGAGCGGTTGCGCATTCTTGGTGACTATGGAGGTGCCAACAGCCACTGCTCGCAACAGGATGCTCA
GGTACTCATCGCACAGTCAGCACGATTCATGCAGATTGCGATGGAATTCCTTGCACAGTAA

Upstream 100 bases:

>100_bases
AATATGGACATGTGATTGGCTTGTTGAGTGCAAGCGAGTCAGACTACCAAAAAGGAGAATGGAGCTTCTTAAGTAGTGTT
CGGCGCGAAGGTATACCCAT

Downstream 100 bases:

>100_bases
CTGCCGCAGACAAGTAAAGATTCAACGTGCTTGGAGACCACCGCTTTGGCGTCGAACAGGGCACAGGTCATTCCACAAAG
AGCGCTCGCACTGATTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTPEQQDLMDRAEQSLQAARILADEALFDVSVSRSYYAMFYCARASLLALNLSSKSHSGTISLFGQHLAAAGRLPIEIHR
QLIDAERLRILGDYGGANSHCSQQDAQVLIAQSARFMQIAMEFLAQ

Sequences:

>Translated_126_residues
MTPEQQDLMDRAEQSLQAARILADEALFDVSVSRSYYAMFYCARASLLALNLSSKSHSGTISLFGQHLAAAGRLPIEIHR
QLIDAERLRILGDYGGANSHCSQQDAQVLIAQSARFMQIAMEFLAQ
>Mature_125_residues
TPEQQDLMDRAEQSLQAARILADEALFDVSVSRSYYAMFYCARASLLALNLSSKSHSGTISLFGQHLAAAGRLPIEIHRQ
LIDAERLRILGDYGGANSHCSQQDAQVLIAQSARFMQIAMEFLAQ

Specific function: Unknown

COG id: COG1895

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0332 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y978_GLOVI (Q7NLZ1)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923924.1
- ProteinModelPortal:   Q7NLZ1
- SMR:   Q7NLZ1
- GeneID:   2599191
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr0978
- NMPDR:   fig|251221.1.peg.978
- HOGENOM:   HBG494302
- OMA:   FYCARAS
- BioCyc:   GVIO251221:GLR0978-MONOMER
- InterPro:   IPR007842

Pfam domain/function: PF05168 HEPN

EC number: NA

Molecular weight: Translated: 13932; Mature: 13801

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEQQDLMDRAEQSLQAARILADEALFDVSVSRSYYAMFYCARASLLALNLSSKSHSGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCCCCCCH
ISLFGQHLAAAGRLPIEIHRQLIDAERLRILGDYGGANSHCSQQDAQVLIAQSARFMQIA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MEFLAQ
HHHHCC
>Mature Secondary Structure 
TPEQQDLMDRAEQSLQAARILADEALFDVSVSRSYYAMFYCARASLLALNLSSKSHSGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCCCCCCH
ISLFGQHLAAAGRLPIEIHRQLIDAERLRILGDYGGANSHCSQQDAQVLIAQSARFMQIA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MEFLAQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292