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The map label for this gene is pspA [C]

Identifier: 37520467

GI number: 37520467

Start: 954759

End: 955472

Strand: Direct

Name: pspA [C]

Synonym: gvip120

Alternate gene names: 37520467

Gene position: 954759-955472 (Clockwise)

Preceding gene: 37520464

Following gene: 37520471

Centisome position: 20.49

GC content: 60.64

Gene sequence:

>714_bases
ATGGGATTATTCGATCGCATCGCCGCGGTCTTGAAGTCCAACCTGAACTCTGTGGTCACCAAGGCCGAAGATCCCGAGAA
GATGCTGAACCAGACGGTCAACGACATGCAGGAGGACCTCGTCCAGCTGCGTCAGGCCGTGGCCCAGGCGATTGCCAGTG
AAAAACGTATAGAACAACAGTACCTCCAGGCCGATGCCCAGGCCAACGAATGGCAGCGCCGCGCCGCCCTCGCCGTCTCC
AAGGACAACGACGAGTTGGCCCGCGAAGCGCTGACCCGCAGAAAGTCTTTTTCTGAAAGCGCCACGGGCCTCAAGACCCA
GCTTGAGCAGCAGCGCAAGACCGTCGCCACCCTCAAGACCAACCTGACCGGCCTCGAAGGCAAAATCTCCGAGGCAAAGG
CCAAAAAAGATCTGCTGGTGGCCCGCGCCCGCTCCGCCAAGGCGACCGAGCAAATCAACCAGACTCTGGGCAAAGTCAAC
ACCGGCGGCTCCTTTTCGACCTTCGAGCGCATGGAAGAAAAGGTCAACGAACTGGAAGCCCGCTCCCAGGCGGTGGCAGA
ACTGGCGACCGACAACCTCGAAGACCAATTTAAAGTCCTCGAATCGGGCGGTGGCGTCGAGGACGAACTGCTTGCCCTCA
AGTCCCAACTCGGCTCACAAAAGTCGCTGCCGGCTGCCGAGGCTCCCAAGCCCGACGCCGACAAGGCCCCCTAG

Upstream 100 bases:

>100_bases
TCCTTGGGTGTCCAATAAATAATTAAGCCGACGCTGGCAAACGGCGCCTGCAACTGGCTACAATACGACACATTGAGAGG
CAAACACTGGAGAGAGCGCT

Downstream 100 bases:

>100_bases
CGACGGAGCCGACCTTCCACTGCCCAGAGCCCGTGCCGCAGCCCCTTTTCTGAGTCAGAAAAGGGGCTGCAGCGTCGATG
CGCACCAGGCTAAGGCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGLFDRIAAVLKSNLNSVVTKAEDPEKMLNQTVNDMQEDLVQLRQAVAQAIASEKRIEQQYLQADAQANEWQRRAALAVS
KDNDELAREALTRRKSFSESATGLKTQLEQQRKTVATLKTNLTGLEGKISEAKAKKDLLVARARSAKATEQINQTLGKVN
TGGSFSTFERMEEKVNELEARSQAVAELATDNLEDQFKVLESGGGVEDELLALKSQLGSQKSLPAAEAPKPDADKAP

Sequences:

>Translated_237_residues
MGLFDRIAAVLKSNLNSVVTKAEDPEKMLNQTVNDMQEDLVQLRQAVAQAIASEKRIEQQYLQADAQANEWQRRAALAVS
KDNDELAREALTRRKSFSESATGLKTQLEQQRKTVATLKTNLTGLEGKISEAKAKKDLLVARARSAKATEQINQTLGKVN
TGGSFSTFERMEEKVNELEARSQAVAELATDNLEDQFKVLESGGGVEDELLALKSQLGSQKSLPAAEAPKPDADKAP
>Mature_236_residues
GLFDRIAAVLKSNLNSVVTKAEDPEKMLNQTVNDMQEDLVQLRQAVAQAIASEKRIEQQYLQADAQANEWQRRAALAVSK
DNDELAREALTRRKSFSESATGLKTQLEQQRKTVATLKTNLTGLEGKISEAKAKKDLLVARARSAKATEQINQTLGKVNT
GGSFSTFERMEEKVNELEARSQAVAELATDNLEDQFKVLESGGGVEDELLALKSQLGSQKSLPAAEAPKPDADKAP

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=217, Percent_Identity=29.0322580645161, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25911; Mature: 25780

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDRIAAVLKSNLNSVVTKAEDPEKMLNQTVNDMQEDLVQLRQAVAQAIASEKRIEQQ
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQADAQANEWQRRAALAVSKDNDELAREALTRRKSFSESATGLKTQLEQQRKTVATLKT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLTGLEGKISEAKAKKDLLVARARSAKATEQINQTLGKVNTGGSFSTFERMEEKVNELEA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RSQAVAELATDNLEDQFKVLESGGGVEDELLALKSQLGSQKSLPAAEAPKPDADKAP
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLFDRIAAVLKSNLNSVVTKAEDPEKMLNQTVNDMQEDLVQLRQAVAQAIASEKRIEQQ
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQADAQANEWQRRAALAVSKDNDELAREALTRRKSFSESATGLKTQLEQQRKTVATLKT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLTGLEGKISEAKAKKDLLVARARSAKATEQINQTLGKVNTGGSFSTFERMEEKVNELEA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RSQAVAELATDNLEDQFKVLESGGGVEDELLALKSQLGSQKSLPAAEAPKPDADKAP
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]