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The map label for this gene is ycf54

Identifier: 37520451

GI number: 37520451

Start: 934036

End: 934365

Strand: Direct

Name: ycf54

Synonym: gvip117

Alternate gene names: NA

Gene position: 934036-934365 (Clockwise)

Preceding gene: 37520446

Following gene: 37520452

Centisome position: 20.05

GC content: 63.94

Gene sequence:

>330_bases
ATGGCACAGACGTATTATTTTCTCGCGGCAAGCGATCGCTTCTTGCAGGGACATCAGGCTCAAGAGGTGCTCGAAGAGCG
CACCCGCCACTACCTGGCTCACAGCAAGGCAATCGATTTCTGGCTGGTGCGTACTCCGGCCTTTCTGGCGGTGCCGGAGT
TTGCCGATCTCCGGCACCGCTGCCCGGCCCCGGCGGCAGCCGTCGTCTCCACCGACGGCCAGTTTATCCTCTGGCTCAAG
CACCGGCTGCAGTATGTGCTGCTAGGCCAATTCGAAGCCCCCAGCGCCGCGATCCCCGACCCGCTCGCCGTCCACACCGC
CGCTCGATGA

Upstream 100 bases:

>100_bases
ATCAAACTCATCGCTACATCGGCACTCCGGACCGGATTTAGCTTCATTTGGGCCAACGGCCCGTACGCTAATATGTACCC
CATGAAGCCCGAGGCACAGC

Downstream 100 bases:

>100_bases
GCACCAAAAGCGGATGGGTGACGGGTATCGGGCTTGTGCTTTTTGCAAGTGCTGTCTGCGCCCAGACGGTACAGCCCTAT
CGCGATTGGATCTTGGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MAQTYYFLAASDRFLQGHQAQEVLEERTRHYLAHSKAIDFWLVRTPAFLAVPEFADLRHRCPAPAAAVVSTDGQFILWLK
HRLQYVLLGQFEAPSAAIPDPLAVHTAAR

Sequences:

>Translated_109_residues
MAQTYYFLAASDRFLQGHQAQEVLEERTRHYLAHSKAIDFWLVRTPAFLAVPEFADLRHRCPAPAAAVVSTDGQFILWLK
HRLQYVLLGQFEAPSAAIPDPLAVHTAAR
>Mature_108_residues
AQTYYFLAASDRFLQGHQAQEVLEERTRHYLAHSKAIDFWLVRTPAFLAVPEFADLRHRCPAPAAAVVSTDGQFILWLKH
RLQYVLLGQFEAPSAAIPDPLAVHTAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019616 [H]

Pfam domain/function: PF10674 DUF2488 [H]

EC number: NA

Molecular weight: Translated: 12314; Mature: 12183

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTYYFLAASDRFLQGHQAQEVLEERTRHYLAHSKAIDFWLVRTPAFLAVPEFADLRHR
CCCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHC
CPAPAAAVVSTDGQFILWLKHRLQYVLLGQFEAPSAAIPDPLAVHTAAR
CCCCCEEEEECCCCEEEEEHHHHHEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQTYYFLAASDRFLQGHQAQEVLEERTRHYLAHSKAIDFWLVRTPAFLAVPEFADLRHR
CCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHC
CPAPAAAVVSTDGQFILWLKHRLQYVLLGQFEAPSAAIPDPLAVHTAAR
CCCCCEEEEECCCCEEEEEHHHHHEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]