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The map label for this gene is nusG [H]

Identifier: 37520399

GI number: 37520399

Start: 887198

End: 887815

Strand: Direct

Name: nusG [H]

Synonym: gvip098

Alternate gene names: 37520399

Gene position: 887198-887815 (Clockwise)

Preceding gene: 37520398

Following gene: 37520400

Centisome position: 19.04

GC content: 62.14

Gene sequence:

>618_bases
ATGGTTATCGGGACTGATTTTCTGATGGATTCCGCAAGAAAGCCCGAGCAGCCCGAGCCGCACTGGTACTTCGTCCAGGT
GGCCTCCGGATGCGAAAAAAAGGTCAAGACCAATCTGGAGCAGCGCATCCAGACGATGGAGATGAGCGAGCGCATCCTCA
AAGTCGAGATTCCCGAGCGCCAGGCGGTCCGCATTCGGCAAGAGGGCTCGCGTACCGCGAGTGCTGAGAAGATTTTTCCG
GGCTACGTGCTCATCAACATGGTGATGGACGACGAGTCCTGGCAGGTGGTCAAAAATACCCCGAACGTGATCAACTTCGT
GGGCACCGAGGAGCGCCGCCGCTACGGCCGCGGGCGCGGCCACGTCACCCCCCGGCCCTTGGGGTCGGCGGAGGTCAACC
GCATCTTCCGCGCCGCCGAGCAGGAGGAGCCGGTGATCAAGGTCGACCTCGAACCCGGGCACAAAATCGAAGTCACCGCC
GGTCCGTTCCAGGACTTCAACGGCGAAGTGGTCGAGGTTAACCCCGAGCGGGGCACCCTCAAGGCGCTCATCTCCATCTT
CGGCCGCGACACGCCGGTCGAACTGGGCTTCAATCAGGTCCGCCGTCTCGACGAATAG

Upstream 100 bases:

>100_bases
TCTGGCCCGATCGCAAGCAGCTGATCAGCCAGTCGGTGTCGGTGGTGCTCATCGTGGTGGTGATCGCAAGCTTCATCTAT
TTGCTCGACGAGTTGTTGAA

Downstream 100 bases:

>100_bases
GAGGTACCCCTGTGACCGTTCTGGTGATTGTTCTAAGAATCCTGTGGTCGCTGCTTGCGGTGGGTATTGTCGTCACAGTG
CTCCTGCACGCCGCCAAGGG

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MVIGTDFLMDSARKPEQPEPHWYFVQVASGCEKKVKTNLEQRIQTMEMSERILKVEIPERQAVRIRQEGSRTASAEKIFP
GYVLINMVMDDESWQVVKNTPNVINFVGTEERRRYGRGRGHVTPRPLGSAEVNRIFRAAEQEEPVIKVDLEPGHKIEVTA
GPFQDFNGEVVEVNPERGTLKALISIFGRDTPVELGFNQVRRLDE

Sequences:

>Translated_205_residues
MVIGTDFLMDSARKPEQPEPHWYFVQVASGCEKKVKTNLEQRIQTMEMSERILKVEIPERQAVRIRQEGSRTASAEKIFP
GYVLINMVMDDESWQVVKNTPNVINFVGTEERRRYGRGRGHVTPRPLGSAEVNRIFRAAEQEEPVIKVDLEPGHKIEVTA
GPFQDFNGEVVEVNPERGTLKALISIFGRDTPVELGFNQVRRLDE
>Mature_205_residues
MVIGTDFLMDSARKPEQPEPHWYFVQVASGCEKKVKTNLEQRIQTMEMSERILKVEIPERQAVRIRQEGSRTASAEKIFP
GYVLINMVMDDESWQVVKNTPNVINFVGTEERRRYGRGRGHVTPRPLGSAEVNRIFRAAEQEEPVIKVDLEPGHKIEVTA
GPFQDFNGEVVEVNPERGTLKALISIFGRDTPVELGFNQVRRLDE

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=189, Percent_Identity=41.7989417989418, Blast_Score=140, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 23404; Mature: 23404

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIGTDFLMDSARKPEQPEPHWYFVQVASGCEKKVKTNLEQRIQTMEMSERILKVEIPER
CEECCHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCH
QAVRIRQEGSRTASAEKIFPGYVLINMVMDDESWQVVKNTPNVINFVGTEERRRYGRGRG
HHHHHHHCCCCCCCHHHCCCCEEEEEEEECCCCCEEECCCCCEEEECCCHHHHHHCCCCC
HVTPRPLGSAEVNRIFRAAEQEEPVIKVDLEPGHKIEVTAGPFQDFNGEVVEVNPERGTL
CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCHHH
KALISIFGRDTPVELGFNQVRRLDE
HHHHHHHCCCCCEECCHHHHHHCCC
>Mature Secondary Structure
MVIGTDFLMDSARKPEQPEPHWYFVQVASGCEKKVKTNLEQRIQTMEMSERILKVEIPER
CEECCHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCH
QAVRIRQEGSRTASAEKIFPGYVLINMVMDDESWQVVKNTPNVINFVGTEERRRYGRGRG
HHHHHHHCCCCCCCHHHCCCCEEEEEEEECCCCCEEECCCCCEEEECCCHHHHHHCCCCC
HVTPRPLGSAEVNRIFRAAEQEEPVIKVDLEPGHKIEVTAGPFQDFNGEVVEVNPERGTL
CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCHHH
KALISIFGRDTPVELGFNQVRRLDE
HHHHHHHCCCCCEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7685084; 8905231; 7505271 [H]