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The map label for this gene is ynbC [H]

Identifier: 37520347

GI number: 37520347

Start: 831166

End: 832032

Strand: Reverse

Name: ynbC [H]

Synonym: gll0778

Alternate gene names: 37520347

Gene position: 832032-831166 (Counterclockwise)

Preceding gene: 37520350

Following gene: 37520346

Centisome position: 17.86

GC content: 62.75

Gene sequence:

>867_bases
ATGTGTTATGGAACGCAATCGATGACCGGTTCAATCGTTGCCAGCGAGTATCTGAAGTCTGCCGATGGCCTGCGCCTGCA
CATCACTCGCTGGGATGTGAACGAGCCTTTTGGGACGTTATTGGTGTTGCCCGGCAAGGGTGAACACGGCGGTCGCTACG
GCCAACTGGCCGCCGGGCTGGCCGCCTGCGGCTGGCAGACCTGGGGACTGGATCCTCGCGGTCAGGGGCTTTCCGACGGA
GCGCGCTCCCGGATCGGTTCCTATGACGAATTTCTGACCGATATCGCAGCAGCCCTGGAAGCACTCGGGCGGGAGTTTCC
CGGTCGGCCCGCGGTCGTGCTCGGATACAGCATGGGAGCGGTGACAGGAGTACTGGCAGCCCTGCGGTGGCCCGAACGCA
TCCAGGGACTCATCTGCGTCTCACCGGCTTTTGTGATCGACAATCGCCTGCGGGGTCTTGCGAAGGTTTTTGCGTACCTG
GGAAGCTGGCTGTTTCCACAGCGAATCGTCGCATCGGGCTACAATCCGGCCGCGGTGACCAACTGCCCCCTTGAGCAGCA
GCAGATTGCCGCCGATCCGCTCATCGACGGTACCACCCGGCCCCGTCTGGTGGTGGAATTGCACAAGGCGGGGGCACAAT
GCCTGCGCCTGGCTCCCCGGTTGGCTATTCCAACGCTCATTCTTGCCACTGCTTTTGATCGCATCGTCGATGCGCGGGGG
GCACAGGCTTTTTACGACCGCCTCCCGGGCGATCGAACCCTCCACTGGTACGACGATCAACTGCACGATCTGTTGCACGA
GCGGCGCAGTGCCGAGGTGACGGGCGAGATTACCGGTTGGCTGCGGGAGAGATGGCCGGGTGCTTAG

Upstream 100 bases:

>100_bases
AGTTCATGAGGCTCTAATTGTTCACTCGGATTTGCTTTTGCTTATATCTCAAATCAGTATCGCTTATCTATGATGCCGGT
CTCAGGCGATGGGATAATGC

Downstream 100 bases:

>100_bases
GCAGGCGGTTTTTCTCGATCGCGACGGTGTGCTCAACCAGGAGCGGGGCTATCTGCACCGGCTTGCGGATCTGGAGTTGA
TCCCCGGTGTGGCAAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MCYGTQSMTGSIVASEYLKSADGLRLHITRWDVNEPFGTLLVLPGKGEHGGRYGQLAAGLAACGWQTWGLDPRGQGLSDG
ARSRIGSYDEFLTDIAAALEALGREFPGRPAVVLGYSMGAVTGVLAALRWPERIQGLICVSPAFVIDNRLRGLAKVFAYL
GSWLFPQRIVASGYNPAAVTNCPLEQQQIAADPLIDGTTRPRLVVELHKAGAQCLRLAPRLAIPTLILATAFDRIVDARG
AQAFYDRLPGDRTLHWYDDQLHDLLHERRSAEVTGEITGWLRERWPGA

Sequences:

>Translated_288_residues
MCYGTQSMTGSIVASEYLKSADGLRLHITRWDVNEPFGTLLVLPGKGEHGGRYGQLAAGLAACGWQTWGLDPRGQGLSDG
ARSRIGSYDEFLTDIAAALEALGREFPGRPAVVLGYSMGAVTGVLAALRWPERIQGLICVSPAFVIDNRLRGLAKVFAYL
GSWLFPQRIVASGYNPAAVTNCPLEQQQIAADPLIDGTTRPRLVVELHKAGAQCLRLAPRLAIPTLILATAFDRIVDARG
AQAFYDRLPGDRTLHWYDDQLHDLLHERRSAEVTGEITGWLRERWPGA
>Mature_288_residues
MCYGTQSMTGSIVASEYLKSADGLRLHITRWDVNEPFGTLLVLPGKGEHGGRYGQLAAGLAACGWQTWGLDPRGQGLSDG
ARSRIGSYDEFLTDIAAALEALGREFPGRPAVVLGYSMGAVTGVLAALRWPERIQGLICVSPAFVIDNRLRGLAKVFAYL
GSWLFPQRIVASGYNPAAVTNCPLEQQQIAADPLIDGTTRPRLVVELHKAGAQCLRLAPRLAIPTLILATAFDRIVDARG
AQAFYDRLPGDRTLHWYDDQLHDLLHERRSAEVTGEITGWLRERWPGA

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=273, Percent_Identity=27.1062271062271, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI6005786, Length=273, Percent_Identity=27.1062271062271, Blast_Score=104, Evalue=9e-23,
Organism=Escherichia coli, GI1787678, Length=284, Percent_Identity=27.8169014084507, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 31419; Mature: 31419

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYGTQSMTGSIVASEYLKSADGLRLHITRWDVNEPFGTLLVLPGKGEHGGRYGQLAAGL
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHH
AACGWQTWGLDPRGQGLSDGARSRIGSYDEFLTDIAAALEALGREFPGRPAVVLGYSMGA
HHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH
VTGVLAALRWPERIQGLICVSPAFVIDNRLRGLAKVFAYLGSWLFPQRIVASGYNPAAVT
HHHHHHHHCCHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NCPLEQQQIAADPLIDGTTRPRLVVELHKAGAQCLRLAPRLAIPTLILATAFDRIVDARG
CCCCHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AQAFYDRLPGDRTLHWYDDQLHDLLHERRSAEVTGEITGWLRERWPGA
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCYGTQSMTGSIVASEYLKSADGLRLHITRWDVNEPFGTLLVLPGKGEHGGRYGQLAAGL
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHH
AACGWQTWGLDPRGQGLSDGARSRIGSYDEFLTDIAAALEALGREFPGRPAVVLGYSMGA
HHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH
VTGVLAALRWPERIQGLICVSPAFVIDNRLRGLAKVFAYLGSWLFPQRIVASGYNPAAVT
HHHHHHHHCCHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NCPLEQQQIAADPLIDGTTRPRLVVELHKAGAQCLRLAPRLAIPTLILATAFDRIVDARG
CCCCHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AQAFYDRLPGDRTLHWYDDQLHDLLHERRSAEVTGEITGWLRERWPGA
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]