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The map label for this gene is yodJ [H]

Identifier: 37520267

GI number: 37520267

Start: 744754

End: 745632

Strand: Direct

Name: yodJ [H]

Synonym: glr0698

Alternate gene names: 37520267

Gene position: 744754-745632 (Clockwise)

Preceding gene: 37520266

Following gene: 37520270

Centisome position: 15.99

GC content: 61.43

Gene sequence:

>879_bases
GTGATTCAGCGGGTTGCCACAGCCACGGGACACACCGATGCGTGCGGCGGTCCTGCGCGCAAACGGTGCCGCCAGTTTCA
CCTGAAAGCTGCGATAGTCGCCTTTCAAGCCGTCTTGGGGCTTTTGGCGCCAAGTCCGTCCCAAGCGCAGCCGGAGCCGC
CGATTCTGGCTGTGCCTGTGTCGACCTCGCCTGAAACCTTGCCCACCCAGTCCGAAGTCGAATTGCCCCCGGTGGATTTG
TTGCCCGCTCCCGAACCGCTGTCCCAACCCGAACCGCAACTGGAAACTCCGCCGCTTTTACTCCCACCCGAGCCTCAGCC
CCCGCCCACCCCCAAGCGCGCCCAACCGGACAAAACGGCCCCCAGCATCGCCTATCCGCCGTACGAAGAAGCAGCTCGTC
GCGATTTGCGTTTGGTGGCAAGCCACAGTACTATTCGCGGACGCAAAGAATATCTGAGCAACGAAGCCGCGTGGGCGTTC
ACCCGGATGCGGGCTGCCGCCGCTAAAGCGGGTGTGAGGCTCATTTTGATCTCCGGTTTTCGCGACCGCACCAGGCAAGC
GAGGATTTTCGCCAAACAGATAGCCAGAAAGGGATCCCTAGCCGCCGCGCTCAAATTGGTTGCCCCTCCCGGCTTCAGCG
AGCACCACACGGGCTACGCCATGGATCTGGGCGATGCGCTCTATCCGAAAACGCATCTGGAGACCACTTTTGAAAACACC
CCCGCCTTTCGCTGGCTCAGCCGCAACGCCGCCCGCTTCGGGTTCGAACTTTCTTACCCGCCAGGCAACGCCGTGGGTGT
CGGCTACGAACCCTGGCACTGGCGGTGGGTTGGATCTAAAAAGGGAAAGATACTTTTCTCTGCAGCCAAGGGTGAATAG

Upstream 100 bases:

>100_bases
CGAGGACGGATTTGTACTGGCTTTTACAAAAACTGGCCCCGGTAAAACGGCCATCGAGCAGACCGGATAAAGCCGCATAC
AGATTCTGGGGTTGAGCCGG

Downstream 100 bases:

>100_bases
GCTTTAGCTTGAAGGCGGGTCCAACTGGCGAAGCGATTCAAAAAGGACCACAGCCACGGCGTTGGAGAGATTCAAACTGC
GTACCGCCGGTTCGGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIQRVATATGHTDACGGPARKRCRQFHLKAAIVAFQAVLGLLAPSPSQAQPEPPILAVPVSTSPETLPTQSEVELPPVDL
LPAPEPLSQPEPQLETPPLLLPPEPQPPPTPKRAQPDKTAPSIAYPPYEEAARRDLRLVASHSTIRGRKEYLSNEAAWAF
TRMRAAAAKAGVRLILISGFRDRTRQARIFAKQIARKGSLAAALKLVAPPGFSEHHTGYAMDLGDALYPKTHLETTFENT
PAFRWLSRNAARFGFELSYPPGNAVGVGYEPWHWRWVGSKKGKILFSAAKGE

Sequences:

>Translated_292_residues
MIQRVATATGHTDACGGPARKRCRQFHLKAAIVAFQAVLGLLAPSPSQAQPEPPILAVPVSTSPETLPTQSEVELPPVDL
LPAPEPLSQPEPQLETPPLLLPPEPQPPPTPKRAQPDKTAPSIAYPPYEEAARRDLRLVASHSTIRGRKEYLSNEAAWAF
TRMRAAAAKAGVRLILISGFRDRTRQARIFAKQIARKGSLAAALKLVAPPGFSEHHTGYAMDLGDALYPKTHLETTFENT
PAFRWLSRNAARFGFELSYPPGNAVGVGYEPWHWRWVGSKKGKILFSAAKGE
>Mature_292_residues
MIQRVATATGHTDACGGPARKRCRQFHLKAAIVAFQAVLGLLAPSPSQAQPEPPILAVPVSTSPETLPTQSEVELPPVDL
LPAPEPLSQPEPQLETPPLLLPPEPQPPPTPKRAQPDKTAPSIAYPPYEEAARRDLRLVASHSTIRGRKEYLSNEAAWAF
TRMRAAAAKAGVRLILISGFRDRTRQARIFAKQIARKGSLAAALKLVAPPGFSEHHTGYAMDLGDALYPKTHLETTFENT
PAFRWLSRNAARFGFELSYPPGNAVGVGYEPWHWRWVGSKKGKILFSAAKGE

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 31850; Mature: 31850

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRVATATGHTDACGGPARKRCRQFHLKAAIVAFQAVLGLLAPSPSQAQPEPPILAVPV
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
STSPETLPTQSEVELPPVDLLPAPEPLSQPEPQLETPPLLLPPEPQPPPTPKRAQPDKTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PSIAYPPYEEAARRDLRLVASHSTIRGRKEYLSNEAAWAFTRMRAAAAKAGVRLILISGF
CCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECC
RDRTRQARIFAKQIARKGSLAAALKLVAPPGFSEHHTGYAMDLGDALYPKTHLETTFENT
HHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCEEEECCCHHCCCHHHHHCCCCC
PAFRWLSRNAARFGFELSYPPGNAVGVGYEPWHWRWVGSKKGKILFSAAKGE
CHHHHHHCCHHHCCEEEECCCCCEEECCCCCCEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure
MIQRVATATGHTDACGGPARKRCRQFHLKAAIVAFQAVLGLLAPSPSQAQPEPPILAVPV
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
STSPETLPTQSEVELPPVDLLPAPEPLSQPEPQLETPPLLLPPEPQPPPTPKRAQPDKTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PSIAYPPYEEAARRDLRLVASHSTIRGRKEYLSNEAAWAFTRMRAAAAKAGVRLILISGF
CCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECC
RDRTRQARIFAKQIARKGSLAAALKLVAPPGFSEHHTGYAMDLGDALYPKTHLETTFENT
HHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCEEEECCCHHCCCHHHHHCCCCC
PAFRWLSRNAARFGFELSYPPGNAVGVGYEPWHWRWVGSKKGKILFSAAKGE
CHHHHHHCCHHHCCEEEECCCCCEEECCCCCCEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]