| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37520253
Identifier: 37520253
GI number: 37520253
Start: 731519
End: 732466
Strand: Direct
Name: 37520253
Synonym: glr0684
Alternate gene names: NA
Gene position: 731519-732466 (Clockwise)
Preceding gene: 37520248
Following gene: 37520255
Centisome position: 15.7
GC content: 64.98
Gene sequence:
>948_bases GTGGAACGTGCACTTGCCTTGCCCCAGATCTTAGCCGTCGGGCTGATAGGATCGCCTGTGGTCCATTCATGTCGGATAAT GGCGACCGTTCTGCGATTTAGTGAACGCCCACTCGTTCGCATTGCACTGTTTTTGGCCGGGCTTTTGGCGCTGTGGCTGC CGGGGGTGTTGGTGTGGCTTTTTGTGACCGGGTGGCGACCGGGGATGCCCTTCGAGACGCTCAGCACCTCTCAGACCCTT GGGGCAGCCGTGATCTTGTACGCGGCTATTCTGGCGGTGTTGCGGCTTTTGGCTCACCGCCTTGACGGCCGCTCCCTCGC CCAGTACGGCCTGGCCCGCGATTGGGCCAATCTCCTCCTCGCAGGCATCGGTCTTGTCATCGGGGTGGTGGGACTCAGTC TACTGGTCGCGGCCGAAGCCGCCCTGGGCTGGGTGAGCTGGCATCCCGAAAAAATCGCCGGGCTAGCTATTCCCCTTGCC GAGGGGCTCGCAGTCGGCCTGGCGGTCGGCTTTATCGAAGAGCTGCTCTTTCGGGGGTTCTTGCTGCAAACGTTCGCCCA GCGCTATGGGGCCTGGGCGGGAGCGGTAGCGAGTGCGGCGCTGTTTGCTGCTGCGCACTTCATCAAAGCCCCCGAAATCA TCCTCGCCACCTGGCCGCAGTTTCCGGCGCTGTTCGCAGCCGGGCTGCTGCTCGCATTCGCCCGCCTGCGGAGCGCCGGT CGTCTGGGGCTTGCCGTCGGACTGCACGCCGGCTGGGTGTGGACCTACTACGTCGTGAGCACCCAGGGTATGGCCCTGTA CGACCGACCCGAAGTGCCCCAGTGGCTCACTGGCCTGGGGGGACATCCCCTGGCCGGAGCCGCCGGGGTGCTGCTTTTGG CCGCCGTCGCCCTGCTGCTTGCCCGTCTGCCGCTGCCCACCCCAGAAAAATTGCCGAAGCACCGTTGA
Upstream 100 bases:
>100_bases CGCCCACCGCTTCCGCAGAAGCCAACCGCCAATCCGGGTAGCGCCAGCCCTGGCAGCCGACGTAAATGAGTGTGTCCTCG GACATCGAAGCCATGCCCCG
Downstream 100 bases:
>100_bases CATCTCTATCCAGAATGGATAGAGTGTCCACATCGGATATATCCGATGTGGATAGTTTCTGGAGTCGGTTCCTGCCCTCG GGCCTTCCCACAGTCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MERALALPQILAVGLIGSPVVHSCRIMATVLRFSERPLVRIALFLAGLLALWLPGVLVWLFVTGWRPGMPFETLSTSQTL GAAVILYAAILAVLRLLAHRLDGRSLAQYGLARDWANLLLAGIGLVIGVVGLSLLVAAEAALGWVSWHPEKIAGLAIPLA EGLAVGLAVGFIEELLFRGFLLQTFAQRYGAWAGAVASAALFAAAHFIKAPEIILATWPQFPALFAAGLLLAFARLRSAG RLGLAVGLHAGWVWTYYVVSTQGMALYDRPEVPQWLTGLGGHPLAGAAGVLLLAAVALLLARLPLPTPEKLPKHR
Sequences:
>Translated_315_residues MERALALPQILAVGLIGSPVVHSCRIMATVLRFSERPLVRIALFLAGLLALWLPGVLVWLFVTGWRPGMPFETLSTSQTL GAAVILYAAILAVLRLLAHRLDGRSLAQYGLARDWANLLLAGIGLVIGVVGLSLLVAAEAALGWVSWHPEKIAGLAIPLA EGLAVGLAVGFIEELLFRGFLLQTFAQRYGAWAGAVASAALFAAAHFIKAPEIILATWPQFPALFAAGLLLAFARLRSAG RLGLAVGLHAGWVWTYYVVSTQGMALYDRPEVPQWLTGLGGHPLAGAAGVLLLAAVALLLARLPLPTPEKLPKHR >Mature_315_residues MERALALPQILAVGLIGSPVVHSCRIMATVLRFSERPLVRIALFLAGLLALWLPGVLVWLFVTGWRPGMPFETLSTSQTL GAAVILYAAILAVLRLLAHRLDGRSLAQYGLARDWANLLLAGIGLVIGVVGLSLLVAAEAALGWVSWHPEKIAGLAIPLA EGLAVGLAVGFIEELLFRGFLLQTFAQRYGAWAGAVASAALFAAAHFIKAPEIILATWPQFPALFAAGLLLAFARLRSAG RLGLAVGLHAGWVWTYYVVSTQGMALYDRPEVPQWLTGLGGHPLAGAAGVLLLAAVALLLARLPLPTPEKLPKHR
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33449; Mature: 33449
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERALALPQILAVGLIGSPVVHSCRIMATVLRFSERPLVRIALFLAGLLALWLPGVLVWL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FVTGWRPGMPFETLSTSQTLGAAVILYAAILAVLRLLAHRLDGRSLAQYGLARDWANLLL HHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AGIGLVIGVVGLSLLVAAEAALGWVSWHPEKIAGLAIPLAEGLAVGLAVGFIEELLFRGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQTFAQRYGAWAGAVASAALFAAAHFIKAPEIILATWPQFPALFAAGLLLAFARLRSAG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCC RLGLAVGLHAGWVWTYYVVSTQGMALYDRPEVPQWLTGLGGHPLAGAAGVLLLAAVALLL CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH ARLPLPTPEKLPKHR HHCCCCCHHCCCCCC >Mature Secondary Structure MERALALPQILAVGLIGSPVVHSCRIMATVLRFSERPLVRIALFLAGLLALWLPGVLVWL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FVTGWRPGMPFETLSTSQTLGAAVILYAAILAVLRLLAHRLDGRSLAQYGLARDWANLLL HHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AGIGLVIGVVGLSLLVAAEAALGWVSWHPEKIAGLAIPLAEGLAVGLAVGFIEELLFRGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQTFAQRYGAWAGAVASAALFAAAHFIKAPEIILATWPQFPALFAAGLLLAFARLRSAG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCC RLGLAVGLHAGWVWTYYVVSTQGMALYDRPEVPQWLTGLGGHPLAGAAGVLLLAAVALLL CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH ARLPLPTPEKLPKHR HHCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA