| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520242
Identifier: 37520242
GI number: 37520242
Start: 720451
End: 720996
Strand: Direct
Name: 37520242
Synonym: glr0673
Alternate gene names: NA
Gene position: 720451-720996 (Clockwise)
Preceding gene: 37520241
Following gene: 37520245
Centisome position: 15.46
GC content: 54.58
Gene sequence:
>546_bases ATGTCAAGAGTTTCGTTCAGAGTAATCTCGACACCTGCTGCAGTATTGCTTGTATTTGCAATCTCAGGTCCGGTTTCCTG TCCCATGTTGGCTCAAACAAAGGGTGGCCCAGTAGGCAAAGCCGCCGTTGCCGAATTAATGCGCTCTCGCCAGTGCGTCT CGTGTAACTTGGCTGGTGCAAATCTAAGCAATATGGATTTGAGCGGCGTGGATCTGAGTTTTGCAAGCCTTCGGGCGGTA AACCTTCGGGGCAGTGATCTGACAGGTGCATTGTTGAACGGAGCCGACTTACGCGGGGCGAAGATCGAAGGAGCTAACCT TACAGGCGTGGGATGCTTCAACTGTCAACTCGGTGGTGCGAGCTTGCGTGGGGCGACAATGGCTGGGATGACCCTTTCCA ATGCCGATCTTACCGGAGCTGATTTGTCCAATACGGATTTTGCCAGGGCTGGCGGTCTTGCCAGGAGCACCATAGGGGCC ATCCTCCCAGATGGTACTATTTGCCGTCCGCCTGCCACCAGTCCTGGCGTATGCCCTTACCGTTGA
Upstream 100 bases:
>100_bases CAGATAGCTGACAGGGTCACCCGGGAAAGGCAGGCAATCATAGTATTGACTTGCCGCCGTTGAAGAAATAACCTGTTCTT GAGCGCTTTGTGGGTACGAA
Downstream 100 bases:
>100_bases GCCAATTTTTATTTCGAATCACGAGACTAGAAGTCTAGACAATAATTAGCAGTGGTACAACGACTGCTGAATATCGACGG CTATGCCATTCTCACTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSRVSFRVISTPAAVLLVFAISGPVSCPMLAQTKGGPVGKAAVAELMRSRQCVSCNLAGANLSNMDLSGVDLSFASLRAV NLRGSDLTGALLNGADLRGAKIEGANLTGVGCFNCQLGGASLRGATMAGMTLSNADLTGADLSNTDFARAGGLARSTIGA ILPDGTICRPPATSPGVCPYR
Sequences:
>Translated_181_residues MSRVSFRVISTPAAVLLVFAISGPVSCPMLAQTKGGPVGKAAVAELMRSRQCVSCNLAGANLSNMDLSGVDLSFASLRAV NLRGSDLTGALLNGADLRGAKIEGANLTGVGCFNCQLGGASLRGATMAGMTLSNADLTGADLSNTDFARAGGLARSTIGA ILPDGTICRPPATSPGVCPYR >Mature_180_residues SRVSFRVISTPAAVLLVFAISGPVSCPMLAQTKGGPVGKAAVAELMRSRQCVSCNLAGANLSNMDLSGVDLSFASLRAVN LRGSDLTGALLNGADLRGAKIEGANLTGVGCFNCQLGGASLRGATMAGMTLSNADLTGADLSNTDFARAGGLARSTIGAI LPDGTICRPPATSPGVCPYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 18189; Mature: 18058
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVSFRVISTPAAVLLVFAISGPVSCPMLAQTKGGPVGKAAVAELMRSRQCVSCNLAGA CCCEEEEEECCCHHHEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEECCC NLSNMDLSGVDLSFASLRAVNLRGSDLTGALLNGADLRGAKIEGANLTGVGCFNCQLGGA CCCCCCCCCCCEEHHHEEEEECCCCCCCCEEECCCCCCCCEECCCCCCEEEEEEEEECCC SLRGATMAGMTLSNADLTGADLSNTDFARAGGLARSTIGAILPDGTICRPPATSPGVCPY CCCCEEEECEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCEECCCCCCCCCCCC R C >Mature Secondary Structure SRVSFRVISTPAAVLLVFAISGPVSCPMLAQTKGGPVGKAAVAELMRSRQCVSCNLAGA CCEEEEEECCCHHHEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEECCC NLSNMDLSGVDLSFASLRAVNLRGSDLTGALLNGADLRGAKIEGANLTGVGCFNCQLGGA CCCCCCCCCCCEEHHHEEEEECCCCCCCCEEECCCCCCCCEECCCCCCEEEEEEEEECCC SLRGATMAGMTLSNADLTGADLSNTDFARAGGLARSTIGAILPDGTICRPPATSPGVCPY CCCCEEEECEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCEECCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]