| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ycdQ [C]
Identifier: 37520237
GI number: 37520237
Start: 716780
End: 717508
Strand: Direct
Name: ycdQ [C]
Synonym: glr0668
Alternate gene names: 37520237
Gene position: 716780-717508 (Clockwise)
Preceding gene: 37520236
Following gene: 37520241
Centisome position: 15.38
GC content: 59.67
Gene sequence:
>729_bases ATGTCTCGCGTTTCGATTGTGATTCCGGCACTCAACGAAGCGACCAATCTCGGTCGAACTCTGCGGCTGCTAAAAGCGCT CGACCCGCCTGCCCATGAGATTTTGGTGGTCGACGGCGGCAGCGCCGACGGGACCGCCGCTGTCGCCCGTGCCTTCGGGT TGCGGGTGCTGGAGAGTCCTCGAGGGCGGGCGGTGCAGATGAACCTGGGGGGGGAAGCTGCCACCGGCGATATCTTGTGT TTTCTACACGCCGATACGTTGGTTCCGGACGACTGTGTGGAAGTAATGATGCGTACCCTGGCCGATCCGGGTACCGCCTG CGCCGGGTTCGTATCGCTGATGGCGGGGCCTGAGACGACCCGCTGGGGCATTTCGCTGCACAACTACCTCAAAACCTATT ACGCGCCGCTGCTGTTTCGGCCGCGGCTGTTCTTCAAAGGGTTGCGGCTGCTGTTTGGTGATCAGGTCATCTTCTGCCGC CGTTCGCAGTTTCTGGAGTGCGGCGGCTTCGACCCGAAAATGGTGATCTTGGAAGAGGCAGATCTGTGCTTGAAAATGGT GCGCTTTGGCCGCATCCGTCAAATAAACCGGGTGGTGCACTCTTCAGATCGGCGTGTGGTCCGCTGGGGATCGTTCAAGG CTACGGCCGTCTACATGTACATTGGTTTTTTGTGGGGTCTGGGCGCCTCGCCCGCCTATCTGAAGCGCTTTTATGCCGAT ATTCGCTGA
Upstream 100 bases:
>100_bases ATCAAATTGAAGCCGCTTTTCGGGTGCCGAATCCAGGTGCTTGAAGCGGCAGGCCGAGCCCTGTGCTAGGGTCGGCGGTG CCGGTCCCGGAAGATGGTGC
Downstream 100 bases:
>100_bases GGTAGTCGATGGGTAACGACTGTGGCCAGGCTGCAGATCGCCGCAGGATCGGTGCGGGCGGAGTTTGTCGATCTCGCGGC GCGACCTCAGGGAGGTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESPRGRAVQMNLGGEAATGDILC FLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETTRWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCR RSQFLECGGFDPKMVILEEADLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD IR
Sequences:
>Translated_242_residues MSRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESPRGRAVQMNLGGEAATGDILC FLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETTRWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCR RSQFLECGGFDPKMVILEEADLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD IR >Mature_241_residues SRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESPRGRAVQMNLGGEAATGDILCF LHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETTRWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCRR SQFLECGGFDPKMVILEEADLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYADI R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26850; Mature: 26719
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESP CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC RGRAVQMNLGGEAATGDILCFLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETT CCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC RWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCRRSQFLECGGFDPKMVILEEA CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEEEEEHH DLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH IR CC >Mature Secondary Structure SRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESP CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC RGRAVQMNLGGEAATGDILCFLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETT CCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC RWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCRRSQFLECGGFDPKMVILEEA CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEEEEEHH DLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH IR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA