Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is ycdQ [C]

Identifier: 37520237

GI number: 37520237

Start: 716780

End: 717508

Strand: Direct

Name: ycdQ [C]

Synonym: glr0668

Alternate gene names: 37520237

Gene position: 716780-717508 (Clockwise)

Preceding gene: 37520236

Following gene: 37520241

Centisome position: 15.38

GC content: 59.67

Gene sequence:

>729_bases
ATGTCTCGCGTTTCGATTGTGATTCCGGCACTCAACGAAGCGACCAATCTCGGTCGAACTCTGCGGCTGCTAAAAGCGCT
CGACCCGCCTGCCCATGAGATTTTGGTGGTCGACGGCGGCAGCGCCGACGGGACCGCCGCTGTCGCCCGTGCCTTCGGGT
TGCGGGTGCTGGAGAGTCCTCGAGGGCGGGCGGTGCAGATGAACCTGGGGGGGGAAGCTGCCACCGGCGATATCTTGTGT
TTTCTACACGCCGATACGTTGGTTCCGGACGACTGTGTGGAAGTAATGATGCGTACCCTGGCCGATCCGGGTACCGCCTG
CGCCGGGTTCGTATCGCTGATGGCGGGGCCTGAGACGACCCGCTGGGGCATTTCGCTGCACAACTACCTCAAAACCTATT
ACGCGCCGCTGCTGTTTCGGCCGCGGCTGTTCTTCAAAGGGTTGCGGCTGCTGTTTGGTGATCAGGTCATCTTCTGCCGC
CGTTCGCAGTTTCTGGAGTGCGGCGGCTTCGACCCGAAAATGGTGATCTTGGAAGAGGCAGATCTGTGCTTGAAAATGGT
GCGCTTTGGCCGCATCCGTCAAATAAACCGGGTGGTGCACTCTTCAGATCGGCGTGTGGTCCGCTGGGGATCGTTCAAGG
CTACGGCCGTCTACATGTACATTGGTTTTTTGTGGGGTCTGGGCGCCTCGCCCGCCTATCTGAAGCGCTTTTATGCCGAT
ATTCGCTGA

Upstream 100 bases:

>100_bases
ATCAAATTGAAGCCGCTTTTCGGGTGCCGAATCCAGGTGCTTGAAGCGGCAGGCCGAGCCCTGTGCTAGGGTCGGCGGTG
CCGGTCCCGGAAGATGGTGC

Downstream 100 bases:

>100_bases
GGTAGTCGATGGGTAACGACTGTGGCCAGGCTGCAGATCGCCGCAGGATCGGTGCGGGCGGAGTTTGTCGATCTCGCGGC
GCGACCTCAGGGAGGTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESPRGRAVQMNLGGEAATGDILC
FLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETTRWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCR
RSQFLECGGFDPKMVILEEADLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD
IR

Sequences:

>Translated_242_residues
MSRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESPRGRAVQMNLGGEAATGDILC
FLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETTRWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCR
RSQFLECGGFDPKMVILEEADLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD
IR
>Mature_241_residues
SRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESPRGRAVQMNLGGEAATGDILCF
LHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETTRWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCRR
SQFLECGGFDPKMVILEEADLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYADI
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26850; Mature: 26719

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESP
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
RGRAVQMNLGGEAATGDILCFLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETT
CCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
RWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCRRSQFLECGGFDPKMVILEEA
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEEEEEHH
DLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IR
CC
>Mature Secondary Structure 
SRVSIVIPALNEATNLGRTLRLLKALDPPAHEILVVDGGSADGTAAVARAFGLRVLESP
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
RGRAVQMNLGGEAATGDILCFLHADTLVPDDCVEVMMRTLADPGTACAGFVSLMAGPETT
CCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
RWGISLHNYLKTYYAPLLFRPRLFFKGLRLLFGDQVIFCRRSQFLECGGFDPKMVILEEA
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEEEEEHH
DLCLKMVRFGRIRQINRVVHSSDRRVVRWGSFKATAVYMYIGFLWGLGASPAYLKRFYAD
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA