| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yoaA [H]
Identifier: 37520183
GI number: 37520183
Start: 655817
End: 657976
Strand: Reverse
Name: yoaA [H]
Synonym: gll0614
Alternate gene names: 37520183
Gene position: 657976-655817 (Counterclockwise)
Preceding gene: 37520186
Following gene: 37520182
Centisome position: 14.12
GC content: 62.78
Gene sequence:
>2160_bases GTGTTGCTAGCTACTTTAGCCAAGATGCTCATCAAGCTGACAGCTCCCACCCCCGACGAGCGGCCACTCGAGCCACAGTG CGCGATTGGCGGAAGACTGAATGCGCCAGTACCGGTATCGCCCTGGCCATCACCCGCTACCGTACAGCTAAATGCCAATG TCGGTGGGTCGCAAGGTAGACAGATGAGCCCCTACACTAGACAAATGATTAGCCTCAGCGATGCCTTCGAGGACGTGGCC CGGGTGCTGCCGGGCTACGAGGTGCGCCAGCCCCAGCTGGATATGGCCCGCGCCGTCGAGCGGGGCTTCGCCGAACGCAT CGCGGTGGTGGCGGAGGCGGGCACCGGCACCGGCAAGAGTTTTAGCGCCCTTGTCCCGGCCATCCTCAGCGGCAAGCGGG TGGTGATTTCGACGGCCACCATCGCCCTGCAGGAGCAGTATCTCTACAAAGACATTCCTTTGCTGCAAAAGGCGCTCCCG GTGCGCTTCGAGGCGCGGCTGGTCAAAGGCCGCAGCCACTATGTCTCGAAGCGGCGCTGGTCAGAATCGCTGCTCGCTCC GGGGATCACCTGGTTGCGCGAGTGGTACGAGCAGACCGAAAGCGGCGATCTGGCCGACCTGCCCACCAGTCCGCCTTCCG AAATCTGGGACGACATCCGCTCCGACAAAGACGATTGCCTGCGCGAGAAGTGTCCTCACTTTGATAGCTGCTTTTATTTC GAGTCGCGCCGCTCGCTCGGGCAGGCACAGATTTTGATCACCAACCACGCGCTATTGCTGATTGATCGGGCAAGCCACGG GCAGATCCTCCCCGACTTCGACTTGCTGGTCATCGACGAGGCCCATCAATTTGCCGAGTACGCCACCCGTGCCCTGACGC TCACCCTCAGCAACTTCGGCATGGGCCGCACCCTGAGCCGAATCAAAAAGCAGTTTCCCAACCTGGGCATCGCCCTGGCG CGGGCGGAGGCGGAGGCGAACGCCTTCTTCGAAGTGCTGCTTACCGAAGCGCACCAGACGCGCCGCTACAATCTCGACCC GGCGATGGCCGACGATCTGTCGGCGGCCGTCGTGCGGCTGTTGCAATCGCTCAAGGAACTGAACCTGGGAAGCGAGGACA ACCTCGAAACGAACGTGGCGCGCATGCGCCGCGACCGGCTGGTGGAGACGCTCACCGGCTACGAGGGCAATTTGCGTGTC CTTGCTGAGCCAGGAGAAAACTGGGTCAACTGGGTCGAATATCAGACGACGCGCGGCGGCGGGACCAATGTCGCACTCAA CTGCACGCCCCTGGATGTGGCACCGCCGTTGGGTCAGTGGTTCAGTCACCCGGACGGACCGACCGCCGTCTGGATGTCGG CCACCCTCAGCACCGCCGGGGCGGACCCGTTCGATTTTTTTCGCCGCCAGGTGGGGCTACCGGCTGGAACCGCCGAGGAG CGCATCTTTGCCAGCCCCTTCGATTACCCGAGCCAGGGTTTGCTATACCTGCCCACCCATCTGCCTGACCCGAATGACGC CAGTTACGCAAACGCCATCGCCGCCGAAATTGAGAAGCTGGTCAATTTCTCGGAGGGCCGCGCCTTTGTGCTCTTTACCA GCCTCCAGCAGATGAAGCAGGTATATGCCCTGCTCGAAGCGAAGTTGCTCTGGCCCGCGCAGCACCAGGAGCAAATGCCC AAGCGCCGCCTGGTCGAATGGTTCCGCACGGTCAAAAACCCGGTGCTCTTTGCCACGGCAAGTTTCTGGGAAGGGGTGAG CGTCGAAGGACCGCAATTGAGCCTGGTGGTTATCGACCGCATTCCGTTTCAGTCGCCCGGCGACATCGTCTACGACGCGC GCTGCGAGCTGCTCTCGCGCACCAGCGGCGATCGGTGGGCCTGGTTCGACCGGCTCGCCCTGCCCTATGCCCAGTTGCGG CTCAAACAGGGAGCGGGCCGCCTCGTCCGTACCCGCACCGACAAAGGCATCGTCGCCATTCTCGACCCGCGCATGCATCG CAAAGCCTACGGCAAGACCATTCTCAAGTCGCTGCCGCCGATGCAGGTGAGCCGTCGCTTCGACCCGCGGCTGTTTCGTG CGTTCATCGACCCAGCCGGCACCGGCGTCAGCGTCGAGGACGACGAGCTATGGGTGCAGGATTTTGGTTTGGGCATCTAA
Upstream 100 bases:
>100_bases CGCATTTCATCGCCAAGTTGATTCGGGGTGAGTTTGAGCGCCAGTAAAATTTCATCCGGGAGCGACAGGGTAACGTCGGG CATTGGAGCTTCCGCCAGAA
Downstream 100 bases:
>100_bases ACTGTGATGATGACATACCGCGGGTAAAGCGATGGTGCAAGTCGTTGCGGCAGGAGATCTGGAATTCATCGATCTTGAAA CAAAATTTGGCCTGGCTCGC
Product: ATP-dependent helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGRQMSPYTRQMISLSDAFEDVA RVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKSFSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALP VRFEARLVKGRSHYVSKRRWSESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFGMGRTLSRIKKQFPNLGIALA RAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRLLQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRV LAEPGENWVNWVEYQTTRGGGTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQVYALLEAKLLWPAQHQEQMP KRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDRIPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLR LKQGAGRLVRTRTDKGIVAILDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI
Sequences:
>Translated_719_residues MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGRQMSPYTRQMISLSDAFEDVA RVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKSFSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALP VRFEARLVKGRSHYVSKRRWSESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFGMGRTLSRIKKQFPNLGIALA RAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRLLQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRV LAEPGENWVNWVEYQTTRGGGTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQVYALLEAKLLWPAQHQEQMP KRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDRIPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLR LKQGAGRLVRTRTDKGIVAILDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI >Mature_719_residues MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGRQMSPYTRQMISLSDAFEDVA RVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKSFSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALP VRFEARLVKGRSHYVSKRRWSESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFGMGRTLSRIKKQFPNLGIALA RAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRLLQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRV LAEPGENWVNWVEYQTTRGGGTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQVYALLEAKLLWPAQHQEQMP KRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDRIPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLR LKQGAGRLVRTRTDKGIVAILDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase ATP-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=640, Percent_Identity=32.65625, Blast_Score=298, Evalue=8e-82, Organism=Escherichia coli, GI1787018, Length=681, Percent_Identity=27.6064610866373, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR006935 [H]
Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 80306; Mature: 80306
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGR CHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC QMSPYTRQMISLSDAFEDVARVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCH FSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALPVRFEARLVKGRSHYVSKRRW HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH SESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEE ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFG HHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEECCCC MGRTLSRIKKQFPNLGIALARAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRL CCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRVLAEPGENWVNWVEYQTTRGG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHEEEEEEEECCC GTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE CCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCC RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQ CEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH VYALLEAKLLWPAQHQEQMPKRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDR HHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCEEEEEEEEC IPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLRLKQGAGRLVRTRTDKGIVAI CCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEE LDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI ECCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLLATLAKMLIKLTAPTPDERPLEPQCAIGGRLNAPVPVSPWPSPATVQLNANVGGSQGR CHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC QMSPYTRQMISLSDAFEDVARVLPGYEVRQPQLDMARAVERGFAERIAVVAEAGTGTGKS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCH FSALVPAILSGKRVVISTATIALQEQYLYKDIPLLQKALPVRFEARLVKGRSHYVSKRRW HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH SESLLAPGITWLREWYEQTESGDLADLPTSPPSEIWDDIRSDKDDCLREKCPHFDSCFYF HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEE ESRRSLGQAQILITNHALLLIDRASHGQILPDFDLLVIDEAHQFAEYATRALTLTLSNFG HHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEECCCC MGRTLSRIKKQFPNLGIALARAEAEANAFFEVLLTEAHQTRRYNLDPAMADDLSAAVVRL CCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LQSLKELNLGSEDNLETNVARMRRDRLVETLTGYEGNLRVLAEPGENWVNWVEYQTTRGG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHEEEEEEEECCC GTNVALNCTPLDVAPPLGQWFSHPDGPTAVWMSATLSTAGADPFDFFRRQVGLPAGTAEE CCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCC RIFASPFDYPSQGLLYLPTHLPDPNDASYANAIAAEIEKLVNFSEGRAFVLFTSLQQMKQ CEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH VYALLEAKLLWPAQHQEQMPKRRLVEWFRTVKNPVLFATASFWEGVSVEGPQLSLVVIDR HHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCEEEEEEEEC IPFQSPGDIVYDARCELLSRTSGDRWAWFDRLALPYAQLRLKQGAGRLVRTRTDKGIVAI CCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEE LDPRMHRKAYGKTILKSLPPMQVSRRFDPRLFRAFIDPAGTGVSVEDDELWVQDFGLGI ECCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]