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The map label for this gene is ydiU [C]

Identifier: 37520165

GI number: 37520165

Start: 638780

End: 640393

Strand: Reverse

Name: ydiU [C]

Synonym: gll0596

Alternate gene names: 37520165

Gene position: 640393-638780 (Counterclockwise)

Preceding gene: 37520168

Following gene: 37520164

Centisome position: 13.75

GC content: 63.94

Gene sequence:

>1614_bases
GTGGCACCCTGCAGGAGTACCTTCAGGCCGAGGCTCTTGTGTACCGATTGCAGCGAAATCAGGCTCATATGGGTCAACAG
CGGGTGTCCGCCCCATGCTAGCTACTCCTGTAAGCACAGTCGGTGCGCGCAGGAGTGCTTAGGCTGGAAGTCGGACCCGA
TTTTGGAGGGCGGTTTGGATACCGATGCGAGCGTCCACAATAATCCGCTGTTGCAACTGGACTACGAGCCGGCCTTCGCC
TCGCTCGGAGACGACTATTACGACCTGGTGGCCGCCGCCCCTTTTCCCGAGCACCGGCTGCGCTTTCGGGGCGACGGGGT
TTTGCGCCTATTGGGCCTCGACCCGGCCACCGTCGGCGAGGAGCACTTTATCGAAGCGTTCGGCCGCTTCGCCGGGCGCG
GGCCGTTTCTGGCGATGCGCTACCACGGCTACCAGTTCGGCGAGTACAACCCCTACCTGGGCGATGGGCGCGGCTTTTTG
TACGGCCAGGTGCGCGGTCTGGACGGTGAGCTGTACGACTTTGGCACCAAGGGTTCGGGCACCACGCCTTATTCGCGCGG
CGGCGACGGGCGGCTCACCCTCAAAGGCGGCGTGCGCGAGGTACTGGCCTCCGAGGCGCTGCACCATCTGGGGGTGCGCA
CCTCCCGCAGCTTGAGTCTGATCGAAACGGGCGAGGCGCTCTGGCGCGGCGACGAACCTTCGCCCACGCGCTCCGCGGTG
CTGGTGCGCACGAGCCGCTCCCACGTCCGCTTCGGCACCTTCGAGCGGCTCCATCACTTCAAGCGCAAGGATTTGATCCA
GAAGTTGCTCGATTATGTGATCGCGGTCTATTACCCGCACTACGGGGCGGAGCCCGAGCGCTACGCGCTGTTCTACCGCG
AACTGGTGGGACGGACGGCGGAGTTGGCCGCCCAGTGGATGGCGGTGGGCTTTACCCACGCCGTGCTCAACACCGACAAC
ATGTCGATCACCGCCGAGAGCTTCGACTACGGCCCCTACGCATTTATAGACAGGTTCGATCCGGGCTTTACCGCCGCCTA
CTTCGACCACTACGGCCGCTACAGCTACGGCAACCAGCCGCTCGTCTGCCGGATCAACCTGGAGGCACTGCAGCTACCGC
TGTCGATGGTGATCCCGATCGCGGACCTGGAGGCGGGTCTGGCGATTTTTGATACCCACTACGCCGCCCACTACACCGCC
CGGATGCTCGCCAAACTGGGTTTTGGGGCGCTCGGTCCGGTGCTGGGTCCCGAACTTGTCAAGGCGACGCTGAACTACCT
GGAAGCGGCTCAGGCCGGTTATCACGGTTTTTTCCAGGCGCTCGCCGCTTCGTTCGACCGCAGCTGGCAAAGCGATCAAG
GGGCGATCCCCGCCCCCGTGGTCGGGGCGCCAGAAGCTTTTGAGCTGTGGCGGGAGAGTTACTTTCGGGCTCTAGCGAGC
CTGTCGGACTCGGAATTGCTGCGCGTGGGTGAGAGGCTCAACCGTCACAATCCGACGACGGTGCTGCTGCGCCCGGCCAT
CGAAGCGGTCTGGGCCGCCATCGACCAGAACGACGACTGGCAACCCTTTTACGATCTGATTGGGCGGCTGCGAAAGCCCT
ATGCCATTGCGTGA

Upstream 100 bases:

>100_bases
GTCGACCGCTTCGAGACCGGCCAAAATCTTCAGCAGCGTCGATTTGCCCGAGCCGTTGGTGCCGATCAGCCCCACCTTGT
CCCCGGCCTCCAGGCTGAAG

Downstream 100 bases:

>100_bases
TATCGAATCCGGGTGAAGCGGCAGGGTTTATATGAGACACCGTCCTTCCGGCTGCTCTTTGCCTGGGTCTGGGTGGATTG
GGTTGGCACGAGGGTCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MAPCRSTFRPRLLCTDCSEIRLIWVNSGCPPHASYSCKHSRCAQECLGWKSDPILEGGLDTDASVHNNPLLQLDYEPAFA
SLGDDYYDLVAAAPFPEHRLRFRGDGVLRLLGLDPATVGEEHFIEAFGRFAGRGPFLAMRYHGYQFGEYNPYLGDGRGFL
YGQVRGLDGELYDFGTKGSGTTPYSRGGDGRLTLKGGVREVLASEALHHLGVRTSRSLSLIETGEALWRGDEPSPTRSAV
LVRTSRSHVRFGTFERLHHFKRKDLIQKLLDYVIAVYYPHYGAEPERYALFYRELVGRTAELAAQWMAVGFTHAVLNTDN
MSITAESFDYGPYAFIDRFDPGFTAAYFDHYGRYSYGNQPLVCRINLEALQLPLSMVIPIADLEAGLAIFDTHYAAHYTA
RMLAKLGFGALGPVLGPELVKATLNYLEAAQAGYHGFFQALAASFDRSWQSDQGAIPAPVVGAPEAFELWRESYFRALAS
LSDSELLRVGERLNRHNPTTVLLRPAIEAVWAAIDQNDDWQPFYDLIGRLRKPYAIA

Sequences:

>Translated_537_residues
MAPCRSTFRPRLLCTDCSEIRLIWVNSGCPPHASYSCKHSRCAQECLGWKSDPILEGGLDTDASVHNNPLLQLDYEPAFA
SLGDDYYDLVAAAPFPEHRLRFRGDGVLRLLGLDPATVGEEHFIEAFGRFAGRGPFLAMRYHGYQFGEYNPYLGDGRGFL
YGQVRGLDGELYDFGTKGSGTTPYSRGGDGRLTLKGGVREVLASEALHHLGVRTSRSLSLIETGEALWRGDEPSPTRSAV
LVRTSRSHVRFGTFERLHHFKRKDLIQKLLDYVIAVYYPHYGAEPERYALFYRELVGRTAELAAQWMAVGFTHAVLNTDN
MSITAESFDYGPYAFIDRFDPGFTAAYFDHYGRYSYGNQPLVCRINLEALQLPLSMVIPIADLEAGLAIFDTHYAAHYTA
RMLAKLGFGALGPVLGPELVKATLNYLEAAQAGYHGFFQALAASFDRSWQSDQGAIPAPVVGAPEAFELWRESYFRALAS
LSDSELLRVGERLNRHNPTTVLLRPAIEAVWAAIDQNDDWQPFYDLIGRLRKPYAIA
>Mature_536_residues
APCRSTFRPRLLCTDCSEIRLIWVNSGCPPHASYSCKHSRCAQECLGWKSDPILEGGLDTDASVHNNPLLQLDYEPAFAS
LGDDYYDLVAAAPFPEHRLRFRGDGVLRLLGLDPATVGEEHFIEAFGRFAGRGPFLAMRYHGYQFGEYNPYLGDGRGFLY
GQVRGLDGELYDFGTKGSGTTPYSRGGDGRLTLKGGVREVLASEALHHLGVRTSRSLSLIETGEALWRGDEPSPTRSAVL
VRTSRSHVRFGTFERLHHFKRKDLIQKLLDYVIAVYYPHYGAEPERYALFYRELVGRTAELAAQWMAVGFTHAVLNTDNM
SITAESFDYGPYAFIDRFDPGFTAAYFDHYGRYSYGNQPLVCRINLEALQLPLSMVIPIADLEAGLAIFDTHYAAHYTAR
MLAKLGFGALGPVLGPELVKATLNYLEAAQAGYHGFFQALAASFDRSWQSDQGAIPAPVVGAPEAFELWRESYFRALASL
SDSELLRVGERLNRHNPTTVLLRPAIEAVWAAIDQNDDWQPFYDLIGRLRKPYAIA

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=289, Percent_Identity=39.7923875432526, Blast_Score=208, Evalue=1e-53,
Organism=Escherichia coli, GI1787999, Length=273, Percent_Identity=43.2234432234432, Blast_Score=232, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6325034, Length=285, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 59923; Mature: 59792

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00615 C_TYPE_LECTIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPCRSTFRPRLLCTDCSEIRLIWVNSGCPPHASYSCKHSRCAQECLGWKSDPILEGGLD
CCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
TDASVHNNPLLQLDYEPAFASLGDDYYDLVAAAPFPEHRLRFRGDGVLRLLGLDPATVGE
CCCCCCCCCEEEEECCCHHHHCCCCHHHHHCCCCCCHHHEEECCCCEEEEEECCCCCCCH
EHFIEAFGRFAGRGPFLAMRYHGYQFGEYNPYLGDGRGFLYGQVRGLDGELYDFGTKGSG
HHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCC
TTPYSRGGDGRLTLKGGVREVLASEALHHLGVRTSRSLSLIETGEALWRGDEPSPTRSAV
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCEE
LVRTSRSHVRFGTFERLHHFKRKDLIQKLLDYVIAVYYPHYGAEPERYALFYRELVGRTA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH
ELAAQWMAVGFTHAVLNTDNMSITAESFDYGPYAFIDRFDPGFTAAYFDHYGRYSYGNQP
HHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCC
LVCRINLEALQLPLSMVIPIADLEAGLAIFDTHYAAHYTARMLAKLGFGALGPVLGPELV
EEEEEEHHHHHCCHHHHEEHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHCCHHHH
KATLNYLEAAQAGYHGFFQALAASFDRSWQSDQGAIPAPVVGAPEAFELWRESYFRALAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSDSELLRVGERLNRHNPTTVLLRPAIEAVWAAIDQNDDWQPFYDLIGRLRKPYAIA
CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
APCRSTFRPRLLCTDCSEIRLIWVNSGCPPHASYSCKHSRCAQECLGWKSDPILEGGLD
CCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
TDASVHNNPLLQLDYEPAFASLGDDYYDLVAAAPFPEHRLRFRGDGVLRLLGLDPATVGE
CCCCCCCCCEEEEECCCHHHHCCCCHHHHHCCCCCCHHHEEECCCCEEEEEECCCCCCCH
EHFIEAFGRFAGRGPFLAMRYHGYQFGEYNPYLGDGRGFLYGQVRGLDGELYDFGTKGSG
HHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCC
TTPYSRGGDGRLTLKGGVREVLASEALHHLGVRTSRSLSLIETGEALWRGDEPSPTRSAV
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCEE
LVRTSRSHVRFGTFERLHHFKRKDLIQKLLDYVIAVYYPHYGAEPERYALFYRELVGRTA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH
ELAAQWMAVGFTHAVLNTDNMSITAESFDYGPYAFIDRFDPGFTAAYFDHYGRYSYGNQP
HHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCC
LVCRINLEALQLPLSMVIPIADLEAGLAIFDTHYAAHYTARMLAKLGFGALGPVLGPELV
EEEEEEHHHHHCCHHHHEEHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHCCHHHH
KATLNYLEAAQAGYHGFFQALAASFDRSWQSDQGAIPAPVVGAPEAFELWRESYFRALAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSDSELLRVGERLNRHNPTTVLLRPAIEAVWAAIDQNDDWQPFYDLIGRLRKPYAIA
CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]