| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520104
Identifier: 37520104
GI number: 37520104
Start: 572282
End: 573346
Strand: Direct
Name: 37520104
Synonym: glr0535
Alternate gene names: NA
Gene position: 572282-573346 (Clockwise)
Preceding gene: 37520103
Following gene: 37520105
Centisome position: 12.28
GC content: 69.2
Gene sequence:
>1065_bases GTGTCTGGTCTGAAGCGCTCCAGAAACTCGCACACCCTGGCGGAGCGCTGGCGCACGGGTCTGGAAGACTACGTCACCGC CACGGCCTGGTCCGCGGATGGCACGTTGCTCGCGGCGGCAACCGCTTCGGGGCCCGTGGCCCTTCTGGCGGGCGACACCG GCGAGGTGGCGGCCACCCTGCCGGGCCATCCTTCCGGCACCCTCACCCTCGCCTGGTCGCCCCGGGACCGATACCTGGCC ACGGGCGGTCAGGATGGCAGAGCCCGGCTCTGGGATCCGACCACCGGTCGCGAGATGGCAGCGCTCGAGGGTGGTGCCGC CTGGGTCGAGCACCTCGCCTGGTCCGACGCCCCCTACCTCCTCGCCACCGCCGCGGGCCGCCGCCTCAACCTCTGGAGCG CGGACGGTCAACTCATCCGCACCGCCGAGCCCCCGCACACAAGCACGATCTCCGGCCTGGTGTGGCATCCGGGGCAGAGG CGCTTCGCCACCAGTTGCTACGGGGCCGTCCGGCTCCACCTGCCCCTGAAGCCCGAACCCGCCGACGTCTTCGAGTACCA GGGGTCGCTCATCGCTTTGAGCTGGAGCCCGGACGGGCGATGGATCGTCTGCGGCTGTCAGGACGCCACGGTGCACATCT GGGAGACAACGAGCGGCGAAGATCTCCAGATGCGCGGCTTCGAGACGAAAGTGCGCAATTTGTCCTGGGAGCCCGGCGGC CGCTACCTGGCCACGGCGAGCGGCATGATCATCACCGTCTGGGACTTCTCTGGCCGCGGTCCGGCCAACACCCGACCGCG GCTACTGTCTGCCCATCAAGGCAGTGTCACGGGTCTTGCCTACCAGCATCGAGGCGGCCTGCTTGCCTCCGGCAGCAGCG ACGGAAGCGTCTGCCTCTGGAATCCCCTCAAGCAAACCAAACCGGTTGCTTTTGCCCAGGGGAACGCCCCGGTGGACAAC CTCGCCTGGCGCCCGGATGATCAGAGCTTTGTCTGCGGCCTGGCCTCGGGCGAAGTGAGCGCCTGGGGAGTACCCACCGA GGGCCGGGGGTTCGGCAGGCATTGA
Upstream 100 bases:
>100_bases GCGCCGATCGGCCCTGGGGCAGCGACGAACCCCGCACCAATCAACTGGTCTTCATCGGCCGCAACCTCGATCGCAACCGG CTGGTGCGGGAGTTCAAAGC
Downstream 100 bases:
>100_bases GTACAATGCGACTGGCCAAATACAGATTGCAACCTCATTCGCTTTCATCATGCAAAATCAAGAGCCATCTATTGTTTTTG ACCAGGAACGCGCTGCTTCC
Product: WD-40 repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSGLKRSRNSHTLAERWRTGLEDYVTATAWSADGTLLAAATASGPVALLAGDTGEVAATLPGHPSGTLTLAWSPRDRYLA TGGQDGRARLWDPTTGREMAALEGGAAWVEHLAWSDAPYLLATAAGRRLNLWSADGQLIRTAEPPHTSTISGLVWHPGQR RFATSCYGAVRLHLPLKPEPADVFEYQGSLIALSWSPDGRWIVCGCQDATVHIWETTSGEDLQMRGFETKVRNLSWEPGG RYLATASGMIITVWDFSGRGPANTRPRLLSAHQGSVTGLAYQHRGGLLASGSSDGSVCLWNPLKQTKPVAFAQGNAPVDN LAWRPDDQSFVCGLASGEVSAWGVPTEGRGFGRH
Sequences:
>Translated_354_residues MSGLKRSRNSHTLAERWRTGLEDYVTATAWSADGTLLAAATASGPVALLAGDTGEVAATLPGHPSGTLTLAWSPRDRYLA TGGQDGRARLWDPTTGREMAALEGGAAWVEHLAWSDAPYLLATAAGRRLNLWSADGQLIRTAEPPHTSTISGLVWHPGQR RFATSCYGAVRLHLPLKPEPADVFEYQGSLIALSWSPDGRWIVCGCQDATVHIWETTSGEDLQMRGFETKVRNLSWEPGG RYLATASGMIITVWDFSGRGPANTRPRLLSAHQGSVTGLAYQHRGGLLASGSSDGSVCLWNPLKQTKPVAFAQGNAPVDN LAWRPDDQSFVCGLASGEVSAWGVPTEGRGFGRH >Mature_353_residues SGLKRSRNSHTLAERWRTGLEDYVTATAWSADGTLLAAATASGPVALLAGDTGEVAATLPGHPSGTLTLAWSPRDRYLAT GGQDGRARLWDPTTGREMAALEGGAAWVEHLAWSDAPYLLATAAGRRLNLWSADGQLIRTAEPPHTSTISGLVWHPGQRR FATSCYGAVRLHLPLKPEPADVFEYQGSLIALSWSPDGRWIVCGCQDATVHIWETTSGEDLQMRGFETKVRNLSWEPGGR YLATASGMIITVWDFSGRGPANTRPRLLSAHQGSVTGLAYQHRGGLLASGSSDGSVCLWNPLKQTKPVAFAQGNAPVDNL AWRPDDQSFVCGLASGEVSAWGVPTEGRGFGRH
Specific function: Unknown
COG id: COG2319
COG function: function code R; FOG: WD40 repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 16 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI62234461, Length=337, Percent_Identity=28.1899109792285, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4557741, Length=290, Percent_Identity=22.7586206896552, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI239787760, Length=293, Percent_Identity=24.9146757679181, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI239787754, Length=293, Percent_Identity=24.9146757679181, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI26665869, Length=333, Percent_Identity=24.024024024024, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI19913367, Length=292, Percent_Identity=23.2876712328767, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI19913365, Length=292, Percent_Identity=23.2876712328767, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI15150805, Length=292, Percent_Identity=23.2876712328767, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI209969680, Length=274, Percent_Identity=26.2773722627737, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI11055998, Length=336, Percent_Identity=25, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI209969678, Length=257, Percent_Identity=26.4591439688716, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI33620742, Length=257, Percent_Identity=26.4591439688716, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4757988, Length=314, Percent_Identity=26.4331210191083, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI213021190, Length=297, Percent_Identity=22.5589225589226, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI213021188, Length=297, Percent_Identity=22.5589225589226, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI213021186, Length=297, Percent_Identity=22.5589225589226, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI5032159, Length=297, Percent_Identity=22.5589225589226, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI20357529, Length=336, Percent_Identity=23.5119047619048, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI113865883, Length=281, Percent_Identity=26.3345195729537, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI239787764, Length=251, Percent_Identity=25.4980079681275, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI19913371, Length=286, Percent_Identity=24.4755244755245, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI16554629, Length=278, Percent_Identity=24.4604316546763, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI16554627, Length=278, Percent_Identity=24.4604316546763, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI83779014, Length=224, Percent_Identity=27.6785714285714, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI32189425, Length=227, Percent_Identity=22.0264317180617, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI118402582, Length=297, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI237820620, Length=182, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI11321585, Length=287, Percent_Identity=21.9512195121951, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI281427272, Length=250, Percent_Identity=22.4, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI21071067, Length=225, Percent_Identity=26.2222222222222, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17536759, Length=333, Percent_Identity=25.5255255255255, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17535491, Length=287, Percent_Identity=21.602787456446, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17534675, Length=336, Percent_Identity=23.2142857142857, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319916, Length=296, Percent_Identity=24.6621621621622, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319675, Length=233, Percent_Identity=25.7510729613734, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24655069, Length=304, Percent_Identity=25.9868421052632, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24655073, Length=304, Percent_Identity=25.9868421052632, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24655061, Length=304, Percent_Identity=25.9868421052632, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24655065, Length=304, Percent_Identity=25.9868421052632, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45549090, Length=351, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24663767, Length=332, Percent_Identity=22.8915662650602, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644363, Length=242, Percent_Identity=24.7933884297521, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24644361, Length=242, Percent_Identity=24.7933884297521, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864654, Length=303, Percent_Identity=23.1023102310231, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45552655, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573462, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573460, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573458, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573456, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137196, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356075, Length=143, Percent_Identity=26.5734265734266, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI18859793, Length=255, Percent_Identity=24.3137254901961, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24654584, Length=257, Percent_Identity=21.4007782101167, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI19922858, Length=307, Percent_Identity=24.4299674267101, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI45555412, Length=287, Percent_Identity=21.602787456446, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45555420, Length=287, Percent_Identity=21.602787456446, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45555433, Length=287, Percent_Identity=21.602787456446, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45555444, Length=287, Percent_Identity=21.602787456446, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI17933598, Length=287, Percent_Identity=21.602787456446, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24642327, Length=287, Percent_Identity=21.602787456446, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24649631, Length=338, Percent_Identity=24.5562130177515, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 - InterPro: IPR020472 - InterPro: IPR007111 - InterPro: IPR011047 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00805 Pentapeptide; PF00400 WD40 [H]
EC number: NA
Molecular weight: Translated: 37910; Mature: 37779
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLKRSRNSHTLAERWRTGLEDYVTATAWSADGTLLAAATASGPVALLAGDTGEVAATL CCCCCCCCCCCHHHHHHHCCHHHHEEEEEECCCCEEEEEEECCCCEEEEECCCCCEEEEC PGHPSGTLTLAWSPRDRYLATGGQDGRARLWDPTTGREMAALEGGAAWVEHLAWSDAPYL CCCCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEE LATAAGRRLNLWSADGQLIRTAEPPHTSTISGLVWHPGQRRFATSCYGAVRLHLPLKPEP EEECCCCEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCHHHHEEEEEEEEEECCCCCC ADVFEYQGSLIALSWSPDGRWIVCGCQDATVHIWETTSGEDLQMRGFETKVRNLSWEPGG CHHHCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCEEECCCCHHHHCCCCCCCC RYLATASGMIITVWDFSGRGPANTRPRLLSAHQGSVTGLAYQHRGGLLASGSSDGSVCLW CEEEECCCEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEECCCCCCCEEEE NPLKQTKPVAFAQGNAPVDNLAWRPDDQSFVCGLASGEVSAWGVPTEGRGFGRH CCCCCCCCEEEECCCCCHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCC >Mature Secondary Structure SGLKRSRNSHTLAERWRTGLEDYVTATAWSADGTLLAAATASGPVALLAGDTGEVAATL CCCCCCCCCCHHHHHHHCCHHHHEEEEEECCCCEEEEEEECCCCEEEEECCCCCEEEEC PGHPSGTLTLAWSPRDRYLATGGQDGRARLWDPTTGREMAALEGGAAWVEHLAWSDAPYL CCCCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEE LATAAGRRLNLWSADGQLIRTAEPPHTSTISGLVWHPGQRRFATSCYGAVRLHLPLKPEP EEECCCCEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCHHHHEEEEEEEEEECCCCCC ADVFEYQGSLIALSWSPDGRWIVCGCQDATVHIWETTSGEDLQMRGFETKVRNLSWEPGG CHHHCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCEEECCCCHHHHCCCCCCCC RYLATASGMIITVWDFSGRGPANTRPRLLSAHQGSVTGLAYQHRGGLLASGSSDGSVCLW CEEEECCCEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEECCCCCCCEEEE NPLKQTKPVAFAQGNAPVDNLAWRPDDQSFVCGLASGEVSAWGVPTEGRGFGRH CCCCCCCCEEEECCCCCHHHCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]