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The map label for this gene is yccZ [C]

Identifier: 37520022

GI number: 37520022

Start: 480859

End: 481833

Strand: Direct

Name: yccZ [C]

Synonym: glr0453

Alternate gene names: 37520022

Gene position: 480859-481833 (Clockwise)

Preceding gene: 37520020

Following gene: 37520023

Centisome position: 10.32

GC content: 63.08

Gene sequence:

>975_bases
ATGCAAAAGCGCAACTGGCGAGAGTGGACAATCCTTCCTGGCTTGCTGGCTTTGCTAGGGACAGCGCCGATGGTCGGGTC
CGCCTCAGCGATGACCCTGAGCGCCTACGACCGGGTCTCAGTAACCGTTGTCAACGGCGAAGAATTCAGTTCGGCGGGTG
AGCAGGGCTTCGTGGTCGGTGCCGACGGCAACATTTTTGTGCCCCAGCTGGGCCGCATCCCAGCTGCCGGTCGCGAAGAG
CTCGAGTTGCAGCAGGAACTCGCCCAGCGGTTGCGGGAGTACATCCGCGTGCCCGATGTGCAGGTGCGGCTGGTCTCGAT
GAGTTCGGTGGCTGTTGACGTAAGTGGTTCGGTCTACCGTCCTGGTCTGGTTACTTTACAACCACCCGCCTCAGTGGCCA
CCAAGATGGAAGTCGGCGCGGTGCGCACCGTTTACAACGCCATTAAAGAGGCGGGGGGAGTGCGCCCCGACGCAAACCTG
GCCCAAATCGAACTGGAGCGCAACGGCCAGCGCACGCGTCTACCCCTGGGGCAGGATGTTCCGGTGATCAGCGGCGATCG
CATTGTCGTCGCGAGTCTTGGCCCGGGGCAGTACGAGATGGCGAACCTGCCTTCGCAGTTGGCTCCTGAGCAGATTACCG
TCTACGTCTCCGGTCAGGATCTGCCCAGCAACGCGGTCGGCCCGGTCAAAGTCCGGCCCGGCACCACCCTGGCGGGAGCG
CTCACTGCGGCGGGCGGTTCGGGCGAGTCTTTCTTGCGCGGTGGCCGCCAGGTGACTTTGATTCGCACCGACCCGACCAA
TGGCCAGCGCACGGCCCAGAATTTCCCGGTCGCCCAGGTGATGGACGGCACTAACGATCTCAAGCTGCTCCAGGACGACA
GCATCGTGGTCAACGCTGGCTCCCCGGCCAACGCCGAAGGATTTCTGAGCTTGATCCAGCCGTTGCTGATGCCGTTCGTG
TGGCTGTTCCGATAA

Upstream 100 bases:

>100_bases
ACGACACCTCTGAGTGCGCTTGAACGGTCTCTCGAAAGGGAGGCCGTTCGCGCATTTTTTTTTTGCACGGGCAATTGCCT
GAGTCACACGGAGAGCAACG

Downstream 100 bases:

>100_bases
TAGGCGTTGGGGTTGACAGATTTACCGCAAACCTAGCTTGGCTAGAAGGATGTTTTTATGAGTAGTGTTGTTGCGATTGG
GCGTCGCCATTGGCGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MQKRNWREWTILPGLLALLGTAPMVGSASAMTLSAYDRVSVTVVNGEEFSSAGEQGFVVGADGNIFVPQLGRIPAAGREE
LELQQELAQRLREYIRVPDVQVRLVSMSSVAVDVSGSVYRPGLVTLQPPASVATKMEVGAVRTVYNAIKEAGGVRPDANL
AQIELERNGQRTRLPLGQDVPVISGDRIVVASLGPGQYEMANLPSQLAPEQITVYVSGQDLPSNAVGPVKVRPGTTLAGA
LTAAGGSGESFLRGGRQVTLIRTDPTNGQRTAQNFPVAQVMDGTNDLKLLQDDSIVVNAGSPANAEGFLSLIQPLLMPFV
WLFR

Sequences:

>Translated_324_residues
MQKRNWREWTILPGLLALLGTAPMVGSASAMTLSAYDRVSVTVVNGEEFSSAGEQGFVVGADGNIFVPQLGRIPAAGREE
LELQQELAQRLREYIRVPDVQVRLVSMSSVAVDVSGSVYRPGLVTLQPPASVATKMEVGAVRTVYNAIKEAGGVRPDANL
AQIELERNGQRTRLPLGQDVPVISGDRIVVASLGPGQYEMANLPSQLAPEQITVYVSGQDLPSNAVGPVKVRPGTTLAGA
LTAAGGSGESFLRGGRQVTLIRTDPTNGQRTAQNFPVAQVMDGTNDLKLLQDDSIVVNAGSPANAEGFLSLIQPLLMPFV
WLFR
>Mature_324_residues
MQKRNWREWTILPGLLALLGTAPMVGSASAMTLSAYDRVSVTVVNGEEFSSAGEQGFVVGADGNIFVPQLGRIPAAGREE
LELQQELAQRLREYIRVPDVQVRLVSMSSVAVDVSGSVYRPGLVTLQPPASVATKMEVGAVRTVYNAIKEAGGVRPDANL
AQIELERNGQRTRLPLGQDVPVISGDRIVVASLGPGQYEMANLPSQLAPEQITVYVSGQDLPSNAVGPVKVRPGTTLAGA
LTAAGGSGESFLRGGRQVTLIRTDPTNGQRTAQNFPVAQVMDGTNDLKLLQDDSIVVNAGSPANAEGFLSLIQPLLMPFV
WLFR

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=152, Percent_Identity=29.6052631578947, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 34456; Mature: 34456

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRNWREWTILPGLLALLGTAPMVGSASAMTLSAYDRVSVTVVNGEEFSSAGEQGFVVG
CCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCHHHCCCCCCCEEEE
ADGNIFVPQLGRIPAAGREELELQQELAQRLREYIRVPDVQVRLVSMSSVAVDVSGSVYR
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCEEC
PGLVTLQPPASVATKMEVGAVRTVYNAIKEAGGVRPDANLAQIELERNGQRTRLPLGQDV
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCC
PVISGDRIVVASLGPGQYEMANLPSQLAPEQITVYVSGQDLPSNAVGPVKVRPGTTLAGA
CEECCCEEEEEECCCCCCHHHCCCHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCEEHH
LTAAGGSGESFLRGGRQVTLIRTDPTNGQRTAQNFPVAQVMDGTNDLKLLQDDSIVVNAG
EEECCCCCHHHHCCCCEEEEEEECCCCCCCHHCCCCHHHHHCCCCCEEEEECCCEEEECC
SPANAEGFLSLIQPLLMPFVWLFR
CCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKRNWREWTILPGLLALLGTAPMVGSASAMTLSAYDRVSVTVVNGEEFSSAGEQGFVVG
CCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCHHHCCCCCCCEEEE
ADGNIFVPQLGRIPAAGREELELQQELAQRLREYIRVPDVQVRLVSMSSVAVDVSGSVYR
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCEEC
PGLVTLQPPASVATKMEVGAVRTVYNAIKEAGGVRPDANLAQIELERNGQRTRLPLGQDV
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCC
PVISGDRIVVASLGPGQYEMANLPSQLAPEQITVYVSGQDLPSNAVGPVKVRPGTTLAGA
CEECCCEEEEEECCCCCCHHHCCCHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCEEHH
LTAAGGSGESFLRGGRQVTLIRTDPTNGQRTAQNFPVAQVMDGTNDLKLLQDDSIVVNAG
EEECCCCCHHHHCCCCEEEEEEECCCCCCCHHCCCCHHHHHCCCCCEEEEECCCEEEECC
SPANAEGFLSLIQPLLMPFVWLFR
CCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]