| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is map [C]
Identifier: 37519981
GI number: 37519981
Start: 431172
End: 431939
Strand: Direct
Name: map [C]
Synonym: glr0412
Alternate gene names: 37519981
Gene position: 431172-431939 (Clockwise)
Preceding gene: 37519980
Following gene: 37519982
Centisome position: 9.25
GC content: 63.67
Gene sequence:
>768_bases ATGGCCCTGCTTGAGATCAAGTCCACCCGCGAGATCGCCAAGATGCGCGAAGCTGGCCGGATTGTGGCAACGGTTCTCAA AGAAATCATGGCCCTAGCCGAACCGGGCCTGACCACCGGCGATCTCGACGCCCACGCCGAGCGCCGCTGCGCCGATTTTG GCGTCATCCCCGCCTTCAAGGGTTATCACGGTTTTCCCGCCTGCATCTGCACGTCGATCAACCACGAGGTCGTCCACGGC ATTCCGAGCGCCAAGCGTCGGCTCAAACCCGGCGATGTCCTCAAAGTCGACTTTGGGGCCATCTACGACGGCTGGCACGG CGATTCGTGCGTGACCATCGGTCTTGAGCCGCTTGCCGAGGAGGCCCGCACACTGATCCGGGTGGCCGAGGAGGCCCTGC TCAAGGGCATCCGCGAGGTGCGCCAGGGCGTGCATCTGCAGCAAGTCTCCGGGGCCATCCAGGACTACGTCGAAGGCTAC GGCTTCTCGGTGGTACGCCAGTACGTCGGCCACGGCGTCGGGCGCAACCTGCACGAGGAGCCCCAGGTGCCCAACTTTCG CACCCGGGAGATTCCCGATCCCAAGCTCAAGTCGGGTATGACCCTGGCCATCGAACCGATGGTCAACCTCGGCCACCACG CCACCCGCACGCTGGCCGATCGCTGGACGGTGGTCACCCTCGACAATTCGCTCTCAGCCCAGTTCGAACACACAGTTCTG GTCACCCGAGACGGCTACGAGATTCTTACCGACCGTTCGAAGGTCTGA
Upstream 100 bases:
>100_bases CCAGCGGAGCGGGCGGGTGCGGGCGGCGGCGGCTAGGTACGAAGTTCTGCAATAATATTAATGATAGCGATGCTGTGTTT ACAGTCGATGAAGGAAAGCC
Downstream 100 bases:
>100_bases CCTTTATTCAGGAGTTGTCCTTGGCAAAGCAAGACGTCATTGAGATGGAAGGAACCGTTGTCGAGTCGCTCCCCAACGCC ATGTTTCGGGTCGAACTCGA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MALLEIKSTREIAKMREAGRIVATVLKEIMALAEPGLTTGDLDAHAERRCADFGVIPAFKGYHGFPACICTSINHEVVHG IPSAKRRLKPGDVLKVDFGAIYDGWHGDSCVTIGLEPLAEEARTLIRVAEEALLKGIREVRQGVHLQQVSGAIQDYVEGY GFSVVRQYVGHGVGRNLHEEPQVPNFRTREIPDPKLKSGMTLAIEPMVNLGHHATRTLADRWTVVTLDNSLSAQFEHTVL VTRDGYEILTDRSKV
Sequences:
>Translated_255_residues MALLEIKSTREIAKMREAGRIVATVLKEIMALAEPGLTTGDLDAHAERRCADFGVIPAFKGYHGFPACICTSINHEVVHG IPSAKRRLKPGDVLKVDFGAIYDGWHGDSCVTIGLEPLAEEARTLIRVAEEALLKGIREVRQGVHLQQVSGAIQDYVEGY GFSVVRQYVGHGVGRNLHEEPQVPNFRTREIPDPKLKSGMTLAIEPMVNLGHHATRTLADRWTVVTLDNSLSAQFEHTVL VTRDGYEILTDRSKV >Mature_254_residues ALLEIKSTREIAKMREAGRIVATVLKEIMALAEPGLTTGDLDAHAERRCADFGVIPAFKGYHGFPACICTSINHEVVHGI PSAKRRLKPGDVLKVDFGAIYDGWHGDSCVTIGLEPLAEEARTLIRVAEEALLKGIREVRQGVHLQQVSGAIQDYVEGYG FSVVRQYVGHGVGRNLHEEPQVPNFRTREIPDPKLKSGMTLAIEPMVNLGHHATRTLADRWTVVTLDNSLSAQFEHTVLV TRDGYEILTDRSKV
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=249, Percent_Identity=36.9477911646586, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI40385867, Length=247, Percent_Identity=34.0080971659919, Blast_Score=152, Evalue=2e-37, Organism=Escherichia coli, GI1786364, Length=254, Percent_Identity=46.4566929133858, Blast_Score=225, Evalue=2e-60, Organism=Escherichia coli, GI1788728, Length=255, Percent_Identity=27.4509803921569, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71996291, Length=256, Percent_Identity=36.328125, Blast_Score=157, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6323273, Length=252, Percent_Identity=36.9047619047619, Blast_Score=162, Evalue=6e-41, Organism=Drosophila melanogaster, GI24583427, Length=246, Percent_Identity=37.3983739837398, Blast_Score=168, Evalue=4e-42, Organism=Drosophila melanogaster, GI21355531, Length=254, Percent_Identity=38.5826771653543, Blast_Score=165, Evalue=2e-41,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 28126; Mature: 27994
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLEIKSTREIAKMREAGRIVATVLKEIMALAEPGLTTGDLDAHAERRCADFGVIPAFK CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC GYHGFPACICTSINHEVVHGIPSAKRRLKPGDVLKVDFGAIYDGWHGDSCVTIGLEPLAE CCCCCHHHHHHCCCHHHHHCCCHHHHCCCCCCEEEEECCCEECCCCCCCEEEECCHHHHH EARTLIRVAEEALLKGIREVRQGVHLQQVSGAIQDYVEGYGFSVVRQYVGHGVGRNLHEE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC PQVPNFRTREIPDPKLKSGMTLAIEPMVNLGHHATRTLADRWTVVTLDNSLSAQFEHTVL CCCCCCCCCCCCCHHHHCCCEEEEEHHHHCCHHHHHHHHHCEEEEEECCCCCCCEEEEEE VTRDGYEILTDRSKV EEECCHHHHCCCCCC >Mature Secondary Structure ALLEIKSTREIAKMREAGRIVATVLKEIMALAEPGLTTGDLDAHAERRCADFGVIPAFK CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC GYHGFPACICTSINHEVVHGIPSAKRRLKPGDVLKVDFGAIYDGWHGDSCVTIGLEPLAE CCCCCHHHHHHCCCHHHHHCCCHHHHCCCCCCEEEEECCCEECCCCCCCEEEECCHHHHH EARTLIRVAEEALLKGIREVRQGVHLQQVSGAIQDYVEGYGFSVVRQYVGHGVGRNLHEE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC PQVPNFRTREIPDPKLKSGMTLAIEPMVNLGHHATRTLADRWTVVTLDNSLSAQFEHTVL CCCCCCCCCCCCCHHHHCCCEEEEEHHHHCCHHHHHHHHHCEEEEEECCCCCCCEEEEEE VTRDGYEILTDRSKV EEECCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]