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The map label for this gene is yebA [C]

Identifier: 37519967

GI number: 37519967

Start: 420221

End: 420976

Strand: Direct

Name: yebA [C]

Synonym: glr0398

Alternate gene names: 37519967

Gene position: 420221-420976 (Clockwise)

Preceding gene: 37519964

Following gene: 37519969

Centisome position: 9.02

GC content: 67.2

Gene sequence:

>756_bases
ATGGCACCCTCCCAACAACCCGATTTGCACTCACCGCTCAAACATCTGCGGATTACCAGCCGCTTCGGCATGCGCATACA
CCCCATCCGGCGGACCCGGCGGCTGCACAAGGGAGTCGACCTGCGCGCCCCAACCGGAACCCCAGTGTACGCCGCCGCCG
ATGGTGCGGTAGAGGCCGCCGGGCGGCAGGGCGGCTACGGCAATGCCGTCCTCATCGATCACGGCGGCGGTTGGAAGACC
CGCTACGCCCACCTCGACAGCGTCCGGGTGCAGGCAGGCGCACCCGTCGAAGCGGGCAAGCCGATTGGCCGCGCAGGAAA
CACCGGTCTATCGAAAGGCCCCCATCTCCACTTCGAACTGTTGCACAACGGCCGCCCGGTCGACCCGATGCCTTACTTGC
AAGCCGCCGCAAAGCCCAGCCGCGCCGCTTCGGTTGCCGCCGCCGCCAAGACGATTCTCGAACGCCGCGGGTACACCGAC
GCTCAAGGCACACGTTCCTACCGTGGTCACACCTACAACTTCGACAAAGAGGGTTCCCGATTAACGGTGAGTGAGCCTGA
CGGCCGGGGGGCGATTCTCGAAGTCGACGGCGGACGAGTGCTCACCGATAGGGTGACAGCCCGGGACGCGACTATCCTCG
GCGAGGTCCGGCGTCGGCTGTTGGCACCACCCGCGCCGGAGCGACAGCCCAGCCGGGTACCGCTCGCGGTTCCAGACCGC
CCCCGACCACAAGCTCTGGAGCACCAGCCGGAGTGA

Upstream 100 bases:

>100_bases
ATGTCCGGCGGCGGACGGCGACTGGCCTGCGCTTTCGGTCAGGGGGACTGGCGACTTAGAGTGCGAGAGCTTATTCACCC
CAAAGCACCCAGCAACCACC

Downstream 100 bases:

>100_bases
TTACCCGGCAGCCGTTGCCGGTTGCTCGCCGGGTTGTTCGACCGCCGACTCCGCCGCGTCCATCGATTGGAGGGCGCGGC
CGGTCGGTGAGGGGGTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MAPSQQPDLHSPLKHLRITSRFGMRIHPIRRTRRLHKGVDLRAPTGTPVYAAADGAVEAAGRQGGYGNAVLIDHGGGWKT
RYAHLDSVRVQAGAPVEAGKPIGRAGNTGLSKGPHLHFELLHNGRPVDPMPYLQAAAKPSRAASVAAAAKTILERRGYTD
AQGTRSYRGHTYNFDKEGSRLTVSEPDGRGAILEVDGGRVLTDRVTARDATILGEVRRRLLAPPAPERQPSRVPLAVPDR
PRPQALEHQPE

Sequences:

>Translated_251_residues
MAPSQQPDLHSPLKHLRITSRFGMRIHPIRRTRRLHKGVDLRAPTGTPVYAAADGAVEAAGRQGGYGNAVLIDHGGGWKT
RYAHLDSVRVQAGAPVEAGKPIGRAGNTGLSKGPHLHFELLHNGRPVDPMPYLQAAAKPSRAASVAAAAKTILERRGYTD
AQGTRSYRGHTYNFDKEGSRLTVSEPDGRGAILEVDGGRVLTDRVTARDATILGEVRRRLLAPPAPERQPSRVPLAVPDR
PRPQALEHQPE
>Mature_250_residues
APSQQPDLHSPLKHLRITSRFGMRIHPIRRTRRLHKGVDLRAPTGTPVYAAADGAVEAAGRQGGYGNAVLIDHGGGWKTR
YAHLDSVRVQAGAPVEAGKPIGRAGNTGLSKGPHLHFELLHNGRPVDPMPYLQAAAKPSRAASVAAAAKTILERRGYTDA
QGTRSYRGHTYNFDKEGSRLTVSEPDGRGAILEVDGGRVLTDRVTARDATILGEVRRRLLAPPAPERQPSRVPLAVPDRP
RPQALEHQPE

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=118, Percent_Identity=43.2203389830509, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI87082174, Length=112, Percent_Identity=39.2857142857143, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87082297, Length=97, Percent_Identity=40.2061855670103, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 27146; Mature: 27015

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPSQQPDLHSPLKHLRITSRFGMRIHPIRRTRRLHKGVDLRAPTGTPVYAAADGAVEAA
CCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEECCCCCCEEEECCCCHHHC
GRQGGYGNAVLIDHGGGWKTRYAHLDSVRVQAGAPVEAGKPIGRAGNTGLSKGPHLHFEL
CCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LHNGRPVDPMPYLQAAAKPSRAASVAAAAKTILERRGYTDAQGTRSYRGHTYNFDKEGSR
ECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE
LTVSEPDGRGAILEVDGGRVLTDRVTARDATILGEVRRRLLAPPAPERQPSRVPLAVPDR
EEEECCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC
PRPQALEHQPE
CCCCCCCCCCC
>Mature Secondary Structure 
APSQQPDLHSPLKHLRITSRFGMRIHPIRRTRRLHKGVDLRAPTGTPVYAAADGAVEAA
CCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEECCCCCCEEEECCCCHHHC
GRQGGYGNAVLIDHGGGWKTRYAHLDSVRVQAGAPVEAGKPIGRAGNTGLSKGPHLHFEL
CCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LHNGRPVDPMPYLQAAAKPSRAASVAAAAKTILERRGYTDAQGTRSYRGHTYNFDKEGSR
ECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE
LTVSEPDGRGAILEVDGGRVLTDRVTARDATILGEVRRRLLAPPAPERQPSRVPLAVPDR
EEEECCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC
PRPQALEHQPE
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]