Click here to switch to the map view.

The map label for this gene is isiB [H]

Identifier: 37519876

GI number: 37519876

Start: 315439

End: 315951

Strand: Reverse

Name: isiB [H]

Synonym: gvip026

Alternate gene names: 37519876

Gene position: 315951-315439 (Counterclockwise)

Preceding gene: 37519877

Following gene: 37519875

Centisome position: 6.78

GC content: 54.97

Gene sequence:

>513_bases
ATGCCAGAAAAAATTCGTCTGTTTTACGGCACGACCACCGGTAAGACCCTCGATGCCGCCTCGATGATCAAAGACGCCTT
CGGCGGGGACACCGTGACGCTCTACGACATTTCGGAGACCGACAAGGAGGATTTGACCGGCGCCGCTCTGCTGATTATCG
GTTGCCCGACCTGGGACATCGGGCAGTTGCAGAGCGATTGGGATGCCTTCTTCCCGGTCCTGGGCGATATCGACTTTACA
GGCAAAAAAATTGCCTACTTCGGCACCGGCGATCAGGTGGGCTATTCGGAAAATTTTCAAGATGCGATGGGCATTCTGGA
GGCAAAAATTTCCGAGCGCGGGGGCACTACCTTAGGCCGCTGGCCGGCGGACGGCTACGACTTCAACGCCTCGCTCGCGG
TCAAAAATGGCAAGTTTGTAGGTCTGGCTCTTGACGACGACAACCAATCGAGGCTGACCGACAAACGCATCAAAGACTGG
GTGGCACAGCTCAAAAAAGAATTTGGTGTTTGA

Upstream 100 bases:

>100_bases
GGATCCGCGAGGAGGCCGACGGCCACCTGCTGCTCACCTGGGATCTGGCTGCAGCAAGGTACTGACCAATGAGTGTTTTT
TTTGATTTCAGGAGCCGAAC

Downstream 100 bases:

>100_bases
CAGAACCATTGCCGGGCGGCGTGGTTCGGCTGGGAGTCCTTGGCTGCCGCCCTTTTCTATTGCCCTCAAGGAGCGCTCGT
GAACGAGACCCAGGTGATTG

Product: flavodoxin FldA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MPEKIRLFYGTTTGKTLDAASMIKDAFGGDTVTLYDISETDKEDLTGAALLIIGCPTWDIGQLQSDWDAFFPVLGDIDFT
GKKIAYFGTGDQVGYSENFQDAMGILEAKISERGGTTLGRWPADGYDFNASLAVKNGKFVGLALDDDNQSRLTDKRIKDW
VAQLKKEFGV

Sequences:

>Translated_170_residues
MPEKIRLFYGTTTGKTLDAASMIKDAFGGDTVTLYDISETDKEDLTGAALLIIGCPTWDIGQLQSDWDAFFPVLGDIDFT
GKKIAYFGTGDQVGYSENFQDAMGILEAKISERGGTTLGRWPADGYDFNASLAVKNGKFVGLALDDDNQSRLTDKRIKDW
VAQLKKEFGV
>Mature_169_residues
PEKIRLFYGTTTGKTLDAASMIKDAFGGDTVTLYDISETDKEDLTGAALLIIGCPTWDIGQLQSDWDAFFPVLGDIDFTG
KKIAYFGTGDQVGYSENFQDAMGILEAKISERGGTTLGRWPADGYDFNASLAVKNGKFVGLALDDDNQSRLTDKRIKDWV
AQLKKEFGV

Specific function: Low-potential electron donor to a number of redox enzymes [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786900, Length=165, Percent_Identity=44.8484848484849, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1789262, Length=165, Percent_Identity=42.4242424242424, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226
- InterPro:   IPR010086 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 18611; Mature: 18480

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKIRLFYGTTTGKTLDAASMIKDAFGGDTVTLYDISETDKEDLTGAALLIIGCPTWDI
CCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GQLQSDWDAFFPVLGDIDFTGKKIAYFGTGDQVGYSENFQDAMGILEAKISERGGTTLGR
CCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
WPADGYDFNASLAVKNGKFVGLALDDDNQSRLTDKRIKDWVAQLKKEFGV
CCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEKIRLFYGTTTGKTLDAASMIKDAFGGDTVTLYDISETDKEDLTGAALLIIGCPTWDI
CCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GQLQSDWDAFFPVLGDIDFTGKKIAYFGTGDQVGYSENFQDAMGILEAKISERGGTTLGR
CCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
WPADGYDFNASLAVKNGKFVGLALDDDNQSRLTDKRIKDWVAQLKKEFGV
CCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1720613; 2119231; 10388575 [H]