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The map label for this gene is recN [H]

Identifier: 37519840

GI number: 37519840

Start: 277718

End: 279418

Strand: Reverse

Name: recN [H]

Synonym: gvip022

Alternate gene names: 37519840

Gene position: 279418-277718 (Counterclockwise)

Preceding gene: 37519841

Following gene: 37519836

Centisome position: 6.0

GC content: 65.73

Gene sequence:

>1701_bases
ATGCTGACGCACCTTCGCATCGAGAATTTTGCCCTGATCGACAATCTGGCGCTGGACTTTGCCGGTGGGCTCAATGTGCT
TACCGGCGAAACTGGAGCGGGCAAATCGATCATCCTCGACGCGCTCGATGTCGTACTCGGGGGCCGGGTGAGCGGCGCCC
AGGTGCGTACCGGCGCCCAGCGCGCCGTGATCGAAGCCACTTTTGGTCCCTCGGCCGCCATCGCAGACTGGCTTGCCGCT
CAGCAGATCGACTCGCTTGAGGAAGGTCTGGTGGTCGTGCGCGAAATCAGCGGCAAGACGAACCGCGCCCGCGTCAACGG
CGTACTCGTCAACCAGGCGGTGCTGCGCGAGTTGCGCGAGCAGCTGCTGGAGATCACCGCCCAGGGCCAGTCGCTGCAGC
TCGAGAAACCGGAAGTGCAGCTGGAATTGCTCGATAATTACGGCGAGATTGCCCCCCGGCGCGAACGGTTCCGCCAAGTC
TACGAAACGCTGCAGCGGCGCAAAGGCGAGTTGGCCCGCAAAAAAGCGGCGCGCGACGACCGTCTCCAGCAGTTGGATTT
GTTTCGTTTTCAGTTCGAGGAGCTGTCGCGCGCTGCTCTTGACGACCCGCAGGAGGAGGAGCAGCTGTTGGCCGACCGAT
CCCGACTCGCCCACGCCGTCGAGCTGCAGCACAACAGCCTGAAGCTCTACGAGATGCTCTACGAAGGAGCCCTGGACCAG
CCGGCGGTCACCGACCTGCTCGGTCAGTCTTCAGAATTGTTGATCCAGATGGGCGAGTACGACGCGAGCCTCGTACCGCT
GGGCGAAATGCTCGAAAACGCCCTGGTGCAGGTGCAGGAGTGCGCCCGCGCCGTCAATCGCTACGGCGAGACGGTCGAAT
CGGACCCCGAAACCCTCGAATACACCGAGAAACGCCTGCGCCAACTCAAGAACCTGCGCCAGAAGTACGGACCGACCCTC
GCCGATGTGATCGCCCATTACCGAAATCTGGAGCGGGATCTGGCCGCCATCGAAGGTAGCGGTGAAGATCTGGAGGTGGA
GGAGAGGGAACTGGCGGGGGAGACGCGGCGGGCCACTGAGCTGGCGGCCGAATTGACCCGGGCGCGCACCGAGGCCGCCG
GGCGGCTCGAAGGCGACCTGGTGCGCGAACTCGCCCCGCTCGGCATGGGCAAGGTCCGATTTGCCGTGCGCATCGAGCCT
TCTCGCCTCGCTTCCAGCGGTGCCGACCGGGTGGGCTTTTTGTGGAGCCCCAATCCCGGCGAACCGCTCCAGCCGCTCAC
CGAAACCGCCTCCGGCGGCGAGATGGCCCGCTTTTTGCTCGCCCTCAAAGCCTGTCTGGGGGGAGCCGATCGCATCGCCA
CCCTGGTATTCGACGAAATCGATGTCGGCGTCTCCGGACGGGTGGCCCAGGCGGTGGCCGAAAAACTTTTGCAGCTCGGG
GCGTCCCACCAGGTGCTCTGCGTTACCCACCAACCGCTGGTGGCCGCCCTCGCCGACAGCCACTACCGCGTGCACAAGGC
GGTGCTCGCCGAGGCCGGCGAGGAGCGCACGGTGGTGCGCGTCGAGACCCTCAACAAAACCGAGGCGCGCCGCGAGGAGT
TGGCCCAACTGGTGGGGGGGCACTCGGCCCACGAAGCGCTCGAATTTGCCGGTGCCCTGCTGGCCGATGCCGACCGCCGC
CGCAGCGCCGTGCGCCCGTGA

Upstream 100 bases:

>100_bases
TGTGGCTCGGACTGTCGAACCCGAGCGGTCTGTCCGCCGAAAGTGGGCCTGCCCGTCGCAGAAGTGCTCGAATATAGTAG
AAGGCTCCCATCGCTGCTCC

Downstream 100 bases:

>100_bases
AGGGTGCGGCGGCCGGTGCGCTTTGCGGAGCATTCAGGCGGGAGCAGCTGCCGGAGCGGCGACCGGCTCGGGCACCCAGC
TCTCGCCATACTTGTTCTTG

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MLTHLRIENFALIDNLALDFAGGLNVLTGETGAGKSIILDALDVVLGGRVSGAQVRTGAQRAVIEATFGPSAAIADWLAA
QQIDSLEEGLVVVREISGKTNRARVNGVLVNQAVLRELREQLLEITAQGQSLQLEKPEVQLELLDNYGEIAPRRERFRQV
YETLQRRKGELARKKAARDDRLQQLDLFRFQFEELSRAALDDPQEEEQLLADRSRLAHAVELQHNSLKLYEMLYEGALDQ
PAVTDLLGQSSELLIQMGEYDASLVPLGEMLENALVQVQECARAVNRYGETVESDPETLEYTEKRLRQLKNLRQKYGPTL
ADVIAHYRNLERDLAAIEGSGEDLEVEERELAGETRRATELAAELTRARTEAAGRLEGDLVRELAPLGMGKVRFAVRIEP
SRLASSGADRVGFLWSPNPGEPLQPLTETASGGEMARFLLALKACLGGADRIATLVFDEIDVGVSGRVAQAVAEKLLQLG
ASHQVLCVTHQPLVAALADSHYRVHKAVLAEAGEERTVVRVETLNKTEARREELAQLVGGHSAHEALEFAGALLADADRR
RSAVRP

Sequences:

>Translated_566_residues
MLTHLRIENFALIDNLALDFAGGLNVLTGETGAGKSIILDALDVVLGGRVSGAQVRTGAQRAVIEATFGPSAAIADWLAA
QQIDSLEEGLVVVREISGKTNRARVNGVLVNQAVLRELREQLLEITAQGQSLQLEKPEVQLELLDNYGEIAPRRERFRQV
YETLQRRKGELARKKAARDDRLQQLDLFRFQFEELSRAALDDPQEEEQLLADRSRLAHAVELQHNSLKLYEMLYEGALDQ
PAVTDLLGQSSELLIQMGEYDASLVPLGEMLENALVQVQECARAVNRYGETVESDPETLEYTEKRLRQLKNLRQKYGPTL
ADVIAHYRNLERDLAAIEGSGEDLEVEERELAGETRRATELAAELTRARTEAAGRLEGDLVRELAPLGMGKVRFAVRIEP
SRLASSGADRVGFLWSPNPGEPLQPLTETASGGEMARFLLALKACLGGADRIATLVFDEIDVGVSGRVAQAVAEKLLQLG
ASHQVLCVTHQPLVAALADSHYRVHKAVLAEAGEERTVVRVETLNKTEARREELAQLVGGHSAHEALEFAGALLADADRR
RSAVRP
>Mature_566_residues
MLTHLRIENFALIDNLALDFAGGLNVLTGETGAGKSIILDALDVVLGGRVSGAQVRTGAQRAVIEATFGPSAAIADWLAA
QQIDSLEEGLVVVREISGKTNRARVNGVLVNQAVLRELREQLLEITAQGQSLQLEKPEVQLELLDNYGEIAPRRERFRQV
YETLQRRKGELARKKAARDDRLQQLDLFRFQFEELSRAALDDPQEEEQLLADRSRLAHAVELQHNSLKLYEMLYEGALDQ
PAVTDLLGQSSELLIQMGEYDASLVPLGEMLENALVQVQECARAVNRYGETVESDPETLEYTEKRLRQLKNLRQKYGPTL
ADVIAHYRNLERDLAAIEGSGEDLEVEERELAGETRRATELAAELTRARTEAAGRLEGDLVRELAPLGMGKVRFAVRIEP
SRLASSGADRVGFLWSPNPGEPLQPLTETASGGEMARFLLALKACLGGADRIATLVFDEIDVGVSGRVAQAVAEKLLQLG
ASHQVLCVTHQPLVAALADSHYRVHKAVLAEAGEERTVVRVETLNKTEARREELAQLVGGHSAHEALEFAGALLADADRR
RSAVRP

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=546, Percent_Identity=32.6007326007326, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62205; Mature: 62205

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHLRIENFALIDNLALDFAGGLNVLTGETGAGKSIILDALDVVLGGRVSGAQVRTGAQ
CCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCH
RAVIEATFGPSAAIADWLAAQQIDSLEEGLVVVREISGKTNRARVNGVLVNQAVLRELRE
HEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCEEEHHHHHHHHHHHHHHH
QLLEITAQGQSLQLEKPEVQLELLDNYGEIAPRRERFRQVYETLQRRKGELARKKAARDD
HHHHHHCCCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQQLDLFRFQFEELSRAALDDPQEEEQLLADRSRLAHAVELQHNSLKLYEMLYEGALDQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PAVTDLLGQSSELLIQMGEYDASLVPLGEMLENALVQVQECARAVNRYGETVESDPETLE
CHHHHHHCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
YTEKRLRQLKNLRQKYGPTLADVIAHYRNLERDLAAIEGSGEDLEVEERELAGETRRATE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHH
LAAELTRARTEAAGRLEGDLVRELAPLGMGKVRFAVRIEPSRLASSGADRVGFLWSPNPG
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCCEEEEECCCCC
EPLQPLTETASGGEMARFLLALKACLGGADRIATLVFDEIDVGVSGRVAQAVAEKLLQLG
CCCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
ASHQVLCVTHQPLVAALADSHYRVHKAVLAEAGEERTVVRVETLNKTEARREELAQLVGG
CCCCEEEEECCHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCC
HSAHEALEFAGALLADADRRRSAVRP
CHHHHHHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MLTHLRIENFALIDNLALDFAGGLNVLTGETGAGKSIILDALDVVLGGRVSGAQVRTGAQ
CCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCH
RAVIEATFGPSAAIADWLAAQQIDSLEEGLVVVREISGKTNRARVNGVLVNQAVLRELRE
HEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCEEEHHHHHHHHHHHHHHH
QLLEITAQGQSLQLEKPEVQLELLDNYGEIAPRRERFRQVYETLQRRKGELARKKAARDD
HHHHHHCCCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQQLDLFRFQFEELSRAALDDPQEEEQLLADRSRLAHAVELQHNSLKLYEMLYEGALDQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PAVTDLLGQSSELLIQMGEYDASLVPLGEMLENALVQVQECARAVNRYGETVESDPETLE
CHHHHHHCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
YTEKRLRQLKNLRQKYGPTLADVIAHYRNLERDLAAIEGSGEDLEVEERELAGETRRATE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHH
LAAELTRARTEAAGRLEGDLVRELAPLGMGKVRFAVRIEPSRLASSGADRVGFLWSPNPG
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCCEEEEECCCCC
EPLQPLTETASGGEMARFLLALKACLGGADRIATLVFDEIDVGVSGRVAQAVAEKLLQLG
CCCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
ASHQVLCVTHQPLVAALADSHYRVHKAVLAEAGEERTVVRVETLNKTEARREELAQLVGG
CCCCEEEEECCHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCC
HSAHEALEFAGALLADADRRRSAVRP
CHHHHHHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]