Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is ybcJ [C]

Identifier: 37519794

GI number: 37519794

Start: 229416

End: 229631

Strand: Reverse

Name: ybcJ [C]

Synonym: gsl0225

Alternate gene names: 37519794

Gene position: 229631-229416 (Counterclockwise)

Preceding gene: 37519795

Following gene: 37519791

Centisome position: 4.93

GC content: 57.41

Gene sequence:

>216_bases
ATGAGCGAGGAGCGGACCTTTATCAAGCTCGACCAGTTTTTGAAACTGGTGGGCGCCGCCCAGACCGGCGGTCAGGCGAA
GATCCTGATTCAAGAGGGTGAGGTACTCGTCAACGGCGCAGTCGAGACCCGCCGAGGCCGCAAACTGCTGGCAGGAGATC
AAGTGACTCTTGCGCAGATGAACTATACGGTCCAACTGAATGAATCCAGCCCGTAG

Upstream 100 bases:

>100_bases
GCGAAGTGATGAAGCAGCTCAAAGAGCGCCACGGCGGCCAGTACGACGGCAAGACCGCAAGCGAAGTCGTCCGCGCCGTC
TTGCACTCGGAGGTCGGTAG

Downstream 100 bases:

>100_bases
CCAAAATTGGTTTGAGGTTTGACACCTGACAGTTGGCTGGGCACGACAGTCTGTGGAGCGAGAGGTGGAACCCCCTTCGG
GTTCCCCTCTCGCGCTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: S4 Domain Protein; S4 Domain Protein YaaA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MSEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQMNYTVQLNESSP

Sequences:

>Translated_71_residues
MSEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQMNYTVQLNESSP
>Mature_70_residues
SEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQMNYTVQLNESSP

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7762; Mature: 7631

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQM
CCCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEECCCCEEEEEE
NYTVQLNESSP
EEEEEEECCCC
>Mature Secondary Structure 
SEERTFIKLDQFLKLVGAAQTGGQAKILIQEGEVLVNGAVETRRGRKLLAGDQVTLAQM
CCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEECCCCEEEEEE
NYTVQLNESSP
EEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA