| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37519775
Identifier: 37519775
GI number: 37519775
Start: 198027
End: 198509
Strand: Reverse
Name: 37519775
Synonym: gll0206
Alternate gene names: NA
Gene position: 198509-198027 (Counterclockwise)
Preceding gene: 37519776
Following gene: 37519774
Centisome position: 4.26
GC content: 47.83
Gene sequence:
>483_bases ATTTCGATCGAGTGTGAAACCGGAGAAGTAGTTCATCTTCAAGTTGATACACTTGAGAAAGCGGATTTGAAGGGCTACAA CCTGCACCGTGCCATTCTATCCGGAGTGAATTTAAGAGCTGCCAATCTTCAAAAAGCGGACTTGCGCGGCGCAATTTTTG ACGATGCATCCCTTGCAGAAGCCGATCTGTCGGAATCGCGCATGATGAACTCGTGGTTAAGAAACGCAGACCTCACCGGG GCGATTCTAACGAAGGCGCGTCCAATTGCCACGGATTTCGATGGTGCGAATTTGACAAAAGCGAATTTAGAAGGCGCAGA TATCGCTTGGGCAAGTTTTAAAGCCGCAAATCTTTGCGATGCGAACATGCTGTGCAAGCGCTTGGAAGAAGCGAATTTTG AGGGAGCTTTTTATAACTTAAGAACCCTTTGGCCAAGGGGTTTTGATCCCTCGAAAAAGGGGGCGATTCTGGTGAATAGC TGA
Upstream 100 bases:
>100_bases GAACTGTGCCGCCACAAATACCCGGTGTCCTGCGGGCAGGTGTCAAACCCAAAGCTCTCGGTGATTTAAAAATTGATATA GAGGATTACGGAAGCAAATG
Downstream 100 bases:
>100_bases ATACACAAGTAATAGAAAAATAGGTTTTACAGGCAATCCTAACTGGCGAACTGAAGAGTTGGGTTTGATACCTGTTATAC CGGGCTATCCAAGCCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSIECETGEVVHLQVDTLEKADLKGYNLHRAILSGVNLRAANLQKADLRGAIFDDASLAEADLSESRMMNSWLRNADLTG AILTKARPIATDFDGANLTKANLEGADIAWASFKAANLCDANMLCKRLEEANFEGAFYNLRTLWPRGFDPSKKGAILVNS
Sequences:
>Translated_160_residues MSIECETGEVVHLQVDTLEKADLKGYNLHRAILSGVNLRAANLQKADLRGAIFDDASLAEADLSESRMMNSWLRNADLTG AILTKARPIATDFDGANLTKANLEGADIAWASFKAANLCDANMLCKRLEEANFEGAFYNLRTLWPRGFDPSKKGAILVNS >Mature_159_residues SIECETGEVVHLQVDTLEKADLKGYNLHRAILSGVNLRAANLQKADLRGAIFDDASLAEADLSESRMMNSWLRNADLTGA ILTKARPIATDFDGANLTKANLEGADIAWASFKAANLCDANMLCKRLEEANFEGAFYNLRTLWPRGFDPSKKGAILVNS
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 17475; Mature: 17344
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIECETGEVVHLQVDTLEKADLKGYNLHRAILSGVNLRAANLQKADLRGAIFDDASLAE CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEECCCCHHH ADLSESRMMNSWLRNADLTGAILTKARPIATDFDGANLTKANLEGADIAWASFKAANLCD HHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCC ANMLCKRLEEANFEGAFYNLRTLWPRGFDPSKKGAILVNS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure SIECETGEVVHLQVDTLEKADLKGYNLHRAILSGVNLRAANLQKADLRGAIFDDASLAE CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEECCCCHHH ADLSESRMMNSWLRNADLTGAILTKARPIATDFDGANLTKANLEGADIAWASFKAANLCD HHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCC ANMLCKRLEEANFEGAFYNLRTLWPRGFDPSKKGAILVNS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]