| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is prpC [H]
Identifier: 37519727
GI number: 37519727
Start: 150634
End: 152166
Strand: Reverse
Name: prpC [H]
Synonym: gll0158
Alternate gene names: 37519727
Gene position: 152166-150634 (Counterclockwise)
Preceding gene: 37519728
Following gene: 37519726
Centisome position: 3.27
GC content: 64.25
Gene sequence:
>1533_bases GTGAGCCTTTCGAGCCCAAAATCTCGCTTATTAAATAGACCCTCGAACTGCCTGCCGTCTGGAGAGCCTGCGGCGGGTTG CGCCGTGGAGTCGGGTTGCCGGACACGGACGAAGCCGCCCTATCCCACCCATCAGCACAAGATGTATTACCTTGCCACCG AAGAGTACCAACGCCTGCCTTCCCCGCTGGCTGACCGCTACACCGTTGTCAATCGCTCTCCGCTGGTGGTGCGCGACCTT TACCCGGAGCGCGAAAGTACACCCCCCGATGTCACGCTGGACACGGCTCAGCCTTACCAGCGCCTCAACCCATGGCGCTG GGCGATCCCGGAGGTGCATGCCCAGTTCACCCCCGGCCGGTGCCTGTTGCTCGAAAACGCGCCGCTGGAGGAAGACGGCG CTCCCTGGCCCACCTTGGGGCAGTCCTGGCCCATGGCGGAGCCGCTGCGGCAGTTGGGCTGGTTGTTGCAACTGGCGAAA CTTTGGGAGCCGTGTTGTCGGCAGAAGGTCGTATCTTCGCTGCTCGCGTCGGCCAATATCGGAGTGCAGGGCTGGCAGGT GCGCCTGTTTTATCTCACTCAAGACCGGGTGCCGGTATCTTTGCAGGCCTTGGCGGCAAGCTGGCTCTCGCTCACACCGA TGGTGGGCGAGCTGCGCGCCGTGGTCCAAGCACTTGCAGCCGGAAAATTCGCTCGGATAGAGGTGCTGGTGGCGGCGCTG GAAGCTCTGGCGGTACAGACGAACACCGGTTGTCGGGTGCAGGCGGTAACCAGCGCCACCCACCCGGGGCGCCGGGAGCT GAATGAAGATTGTCTGGTCTATGATCCCCAGGGCCGCTTCGCCGTAGTCTGCGACGGCATGGGCGGACACGAAGGGGGCA AACTGGCCAGTTTTCTGGCCATCTCTTCGCTTCAGCAGGACTTTGCCTGCTTGAGCTATCAGGATTCCCCCCCCTCCGAG CTGCGCGCTCAACTGGCGGGTGCGGCGCAGCGGGCCCACCAGCGGCTGTGGCGGCTCAACCAGCGGCAGGGGCGCAGCGG GCGGCGGCAGATGGGTACGACCGTGGCAGCCTGCTTTTTGAGGGGACCGTTGCTGCACACGGTGCATGTGGGCGACAGTC GCGTCTATCTTATCGACCGGCGGCACTGCCAGCAGTTGAGCGTCGATGACGATGTGCTCAATCTGGAGGTGAGTCTGGCG CGCACCACCCGCCGGGCGCTGCACCGGCAGTCCGGCAGCGGCAGGCTGACCCAGGCGCTTGGGGTGATTCCTCCGAACGA CCTCAAGCCCACCACCCGGAGCTTTTTGCTTCCGGAAGATTGTCTGGTGCTGCTGTGCAGCGACGGACTCTCGGACGGCG ACTTTGTGGAACGCCACTGGCGCGAGGCGTTTTTGCCATTGCTCGATAGGGGCAATCTCGAAGCTGCGGGCGCTGCGCTC GTTGAAATGGCCCTTTTGGAGCTGGGGCACGACAACATCTCGTTCGTGCTGCTCAAGTACGCCGCTGCTGCGCCCCGCAC CGATGCCGGCTGA
Upstream 100 bases:
>100_bases ACCCTCGAAGATCGCTCGGTGCTCGAGAAGCTGCGCGAGGGCTAAAATCTGCGCGGTTGTATGAGTTATAGCGGTGGCCC GGTGAAAAATTAACCGCATA
Downstream 100 bases:
>100_bases CCCGCACGCTGCCGTGAAGCGCCTGTAGCTGGGGCCTTGCTGGAATAATTTCGTCCTGCAGATTCGGTGAGCTTGCCCGG CTGCTGGTGCACTACCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MSLSSPKSRLLNRPSNCLPSGEPAAGCAVESGCRTRTKPPYPTHQHKMYYLATEEYQRLPSPLADRYTVVNRSPLVVRDL YPERESTPPDVTLDTAQPYQRLNPWRWAIPEVHAQFTPGRCLLLENAPLEEDGAPWPTLGQSWPMAEPLRQLGWLLQLAK LWEPCCRQKVVSSLLASANIGVQGWQVRLFYLTQDRVPVSLQALAASWLSLTPMVGELRAVVQALAAGKFARIEVLVAAL EALAVQTNTGCRVQAVTSATHPGRRELNEDCLVYDPQGRFAVVCDGMGGHEGGKLASFLAISSLQQDFACLSYQDSPPSE LRAQLAGAAQRAHQRLWRLNQRQGRSGRRQMGTTVAACFLRGPLLHTVHVGDSRVYLIDRRHCQQLSVDDDVLNLEVSLA RTTRRALHRQSGSGRLTQALGVIPPNDLKPTTRSFLLPEDCLVLLCSDGLSDGDFVERHWREAFLPLLDRGNLEAAGAAL VEMALLELGHDNISFVLLKYAAAAPRTDAG
Sequences:
>Translated_510_residues MSLSSPKSRLLNRPSNCLPSGEPAAGCAVESGCRTRTKPPYPTHQHKMYYLATEEYQRLPSPLADRYTVVNRSPLVVRDL YPERESTPPDVTLDTAQPYQRLNPWRWAIPEVHAQFTPGRCLLLENAPLEEDGAPWPTLGQSWPMAEPLRQLGWLLQLAK LWEPCCRQKVVSSLLASANIGVQGWQVRLFYLTQDRVPVSLQALAASWLSLTPMVGELRAVVQALAAGKFARIEVLVAAL EALAVQTNTGCRVQAVTSATHPGRRELNEDCLVYDPQGRFAVVCDGMGGHEGGKLASFLAISSLQQDFACLSYQDSPPSE LRAQLAGAAQRAHQRLWRLNQRQGRSGRRQMGTTVAACFLRGPLLHTVHVGDSRVYLIDRRHCQQLSVDDDVLNLEVSLA RTTRRALHRQSGSGRLTQALGVIPPNDLKPTTRSFLLPEDCLVLLCSDGLSDGDFVERHWREAFLPLLDRGNLEAAGAAL VEMALLELGHDNISFVLLKYAAAAPRTDAG >Mature_509_residues SLSSPKSRLLNRPSNCLPSGEPAAGCAVESGCRTRTKPPYPTHQHKMYYLATEEYQRLPSPLADRYTVVNRSPLVVRDLY PERESTPPDVTLDTAQPYQRLNPWRWAIPEVHAQFTPGRCLLLENAPLEEDGAPWPTLGQSWPMAEPLRQLGWLLQLAKL WEPCCRQKVVSSLLASANIGVQGWQVRLFYLTQDRVPVSLQALAASWLSLTPMVGELRAVVQALAAGKFARIEVLVAALE ALAVQTNTGCRVQAVTSATHPGRRELNEDCLVYDPQGRFAVVCDGMGGHEGGKLASFLAISSLQQDFACLSYQDSPPSEL RAQLAGAAQRAHQRLWRLNQRQGRSGRRQMGTTVAACFLRGPLLHTVHVGDSRVYLIDRRHCQQLSVDDDVLNLEVSLAR TTRRALHRQSGSGRLTQALGVIPPNDLKPTTRSFLLPEDCLVLLCSDGLSDGDFVERHWREAFLPLLDRGNLEAAGAALV EMALLELGHDNISFVLLKYAAAAPRTDAG
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 56251; Mature: 56120
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSPKSRLLNRPSNCLPSGEPAAGCAVESGCRTRTKPPYPTHQHKMYYLATEEYQRLP CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHCC SPLADRYTVVNRSPLVVRDLYPERESTPPDVTLDTAQPYQRLNPWRWAIPEVHAQFTPGR CCHHHCEEEECCCCEEEEECCCCCCCCCCCEEECCCCHHHHCCCCEECCCHHHCCCCCCE CLLLENAPLEEDGAPWPTLGQSWPMAEPLRQLGWLLQLAKLWEPCCRQKVVSSLLASANI EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVQGWQVRLFYLTQDRVPVSLQALAASWLSLTPMVGELRAVVQALAAGKFARIEVLVAAL CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EALAVQTNTGCRVQAVTSATHPGRRELNEDCLVYDPQGRFAVVCDGMGGHEGGKLASFLA HHHHEECCCCCEEEEECCCCCCCHHHCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHH ISSLQQDFACLSYQDSPPSELRAQLAGAAQRAHQRLWRLNQRQGRSGRRQMGTTVAACFL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RGPLLHTVHVGDSRVYLIDRRHCQQLSVDDDVLNLEVSLARTTRRALHRQSGSGRLTQAL CCCCEEEEEECCCEEEEEECHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHH GVIPPNDLKPTTRSFLLPEDCLVLLCSDGLSDGDFVERHWREAFLPLLDRGNLEAAGAAL CCCCCCCCCCCHHHHCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH VEMALLELGHDNISFVLLKYAAAAPRTDAG HHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLSSPKSRLLNRPSNCLPSGEPAAGCAVESGCRTRTKPPYPTHQHKMYYLATEEYQRLP CCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHCC SPLADRYTVVNRSPLVVRDLYPERESTPPDVTLDTAQPYQRLNPWRWAIPEVHAQFTPGR CCHHHCEEEECCCCEEEEECCCCCCCCCCCEEECCCCHHHHCCCCEECCCHHHCCCCCCE CLLLENAPLEEDGAPWPTLGQSWPMAEPLRQLGWLLQLAKLWEPCCRQKVVSSLLASANI EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GVQGWQVRLFYLTQDRVPVSLQALAASWLSLTPMVGELRAVVQALAAGKFARIEVLVAAL CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EALAVQTNTGCRVQAVTSATHPGRRELNEDCLVYDPQGRFAVVCDGMGGHEGGKLASFLA HHHHEECCCCCEEEEECCCCCCCHHHCCCCCEEECCCCCEEEEECCCCCCCCCHHHHHHH ISSLQQDFACLSYQDSPPSELRAQLAGAAQRAHQRLWRLNQRQGRSGRRQMGTTVAACFL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RGPLLHTVHVGDSRVYLIDRRHCQQLSVDDDVLNLEVSLARTTRRALHRQSGSGRLTQAL CCCCEEEEEECCCEEEEEECHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHH GVIPPNDLKPTTRSFLLPEDCLVLLCSDGLSDGDFVERHWREAFLPLLDRGNLEAAGAAL CCCCCCCCCCCHHHHCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH VEMALLELGHDNISFVLLKYAAAAPRTDAG HHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]