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The map label for this gene is yhcZ [H]

Identifier: 37519631

GI number: 37519631

Start: 64964

End: 65668

Strand: Reverse

Name: yhcZ [H]

Synonym: gll0062

Alternate gene names: 37519631

Gene position: 65668-64964 (Counterclockwise)

Preceding gene: 37519632

Following gene: 37519630

Centisome position: 1.41

GC content: 66.81

Gene sequence:

>705_bases
ATGTCCATCCGCGTTGTCGTTGTCGATGATCACCCGGATGTGCTGCTCGGTGCAGCCGCCTATCTGGGCAATTGCCCCGA
CATCCGCCTGGTGGCCCAGGCCCAGACGATTGCAGAAGCCCTCGTTGTGATCCGCGATCACCAGCCCCAGGTCGCCCTGG
TCGACCTCGAACTGCCCCGTGCCGCCGGTGAATCGGCGGAGTACCTGGGGGGACTGGCGATCGGCCGGGCCATCCGGGCG
GGCGGCTGGCCCACCCGGCTCATCATCATGACCGGTCACCAGGATCGCTCCGGGCTGGTGGCTGCCCAGCCTTTCGTCGA
CTGCAAGCCCCGGGTGGTCTACGACTATCTGCTCAAGACCGCCACACCCCAGGAGCGCATCGAGGCGATCCGCCAGGCCG
CCCAGGGCGTCGGCCGCCCCCTCAAGCTCGATGTGCCCAAGCTCACGCCCCGCGAGCGCATCGTGCTGCGCTATATGGCC
CTGGGGCTCGAAAACGGCGAGATTGCCCAGAAGCTGGTGGTGGCGCCTTCGACGGTCGCTTCCCATGTCAAGTCACTGAT
GGCGAAGATTCTTTCGGAGCCCGGTGTCGAGGACGGCCAACTGCGCCGTACCCGGACGCTGTGTGTGCGCCGCGCCCTGG
AGTACGGCATCTTGCGGCCTGATCAAATCAACCGCAATCACCTCGGGCGCGACCCGGTGCGCTGA

Upstream 100 bases:

>100_bases
GACGCTGGGGATAGGGCCTTCGGTACCGGGCATCCCCCAGGCGTAGGATGACATGGTGCGCCTGCTAACATAGGCGCAAA
CAATTGCGTTCGGTGATACG

Downstream 100 bases:

>100_bases
GCCTCGCTGTCCGCCCGCTGGAACCCGCCCGGCGGGCGCGAGTCTACAATAAAAATTACGAACCATTTGCAGGCGGGGCG
GGCGATGGGTGTCAGCAAGA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSIRVVVVDDHPDVLLGAAAYLGNCPDIRLVAQAQTIAEALVVIRDHQPQVALVDLELPRAAGESAEYLGGLAIGRAIRA
GGWPTRLIIMTGHQDRSGLVAAQPFVDCKPRVVYDYLLKTATPQERIEAIRQAAQGVGRPLKLDVPKLTPRERIVLRYMA
LGLENGEIAQKLVVAPSTVASHVKSLMAKILSEPGVEDGQLRRTRTLCVRRALEYGILRPDQINRNHLGRDPVR

Sequences:

>Translated_234_residues
MSIRVVVVDDHPDVLLGAAAYLGNCPDIRLVAQAQTIAEALVVIRDHQPQVALVDLELPRAAGESAEYLGGLAIGRAIRA
GGWPTRLIIMTGHQDRSGLVAAQPFVDCKPRVVYDYLLKTATPQERIEAIRQAAQGVGRPLKLDVPKLTPRERIVLRYMA
LGLENGEIAQKLVVAPSTVASHVKSLMAKILSEPGVEDGQLRRTRTLCVRRALEYGILRPDQINRNHLGRDPVR
>Mature_233_residues
SIRVVVVDDHPDVLLGAAAYLGNCPDIRLVAQAQTIAEALVVIRDHQPQVALVDLELPRAAGESAEYLGGLAIGRAIRAG
GWPTRLIIMTGHQDRSGLVAAQPFVDCKPRVVYDYLLKTATPQERIEAIRQAAQGVGRPLKLDVPKLTPRERIVLRYMAL
GLENGEIAQKLVVAPSTVASHVKSLMAKILSEPGVEDGQLRRTRTLCVRRALEYGILRPDQINRNHLGRDPVR

Specific function: Member of the two-component regulatory system yhcY/yhcZ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25632; Mature: 25501

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRVVVVDDHPDVLLGAAAYLGNCPDIRLVAQAQTIAEALVVIRDHQPQVALVDLELPR
CEEEEEEECCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCC
AAGESAEYLGGLAIGRAIRAGGWPTRLIIMTGHQDRSGLVAAQPFVDCKPRVVYDYLLKT
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHC
ATPQERIEAIRQAAQGVGRPLKLDVPKLTPRERIVLRYMALGLENGEIAQKLVVAPSTVA
CCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
SHVKSLMAKILSEPGVEDGQLRRTRTLCVRRALEYGILRPDQINRNHLGRDPVR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIRVVVVDDHPDVLLGAAAYLGNCPDIRLVAQAQTIAEALVVIRDHQPQVALVDLELPR
EEEEEEECCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCC
AAGESAEYLGGLAIGRAIRAGGWPTRLIIMTGHQDRSGLVAAQPFVDCKPRVVYDYLLKT
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHC
ATPQERIEAIRQAAQGVGRPLKLDVPKLTPRERIVLRYMALGLENGEIAQKLVVAPSTVA
CCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
SHVKSLMAKILSEPGVEDGQLRRTRTLCVRRALEYGILRPDQINRNHLGRDPVR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]